Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20093
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    27   0.41 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   5.0  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    24   5.0  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    24   5.0  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +3

Query: 174 KQIRYCIQ*RARLSNM*KMEIDVDSMASCKELTRKLLSLMPMLLNKKKTLFHHII 338
           +Q+R   + R RLS   K EI + +M  C  +   L +L  M++N  +  +  II
Sbjct: 287 RQVRRANKERQRLSRSEKREIGLATMLICVVIVFLLCNLPAMMINIVEAFYSLII 341


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 501 NELELDF-FKFNYHIQSKPFTATSFRTTYR 587
           N L++D  F+ N+   + P   T +RT YR
Sbjct: 367 NVLDIDDDFRCNHRCNTLPHNPTYYRTVYR 396


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 190 QYLICLMNQIKSAHKNSICLSFFKVF 113
           Q + CL NQ K A K S C   +  F
Sbjct: 239 QTVACLQNQKKLACKKSTCQQAYDTF 264


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 190 QYLICLMNQIKSAHKNSICLSFFKVF 113
           Q + CL NQ K A K S C   +  F
Sbjct: 239 QTVACLQNQKKLACKKSTCQQAYDTF 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,674
Number of Sequences: 2352
Number of extensions: 10696
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)