Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20091
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.60 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 405  SLQWVSLTSNLQQAFFDNLTGSVEKIFYHVEE 310
            +L WV++ +      +D  TG V  ++YH E+
Sbjct: 1581 NLDWVAVMTYDFHGQWDKQTGHVAPLYYHPED 1612



 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -2

Query: 402  LQWVSLTSNLQQAFFDNLTGSVEKIFYHVEE 310
            L W+++        +D +TG V  ++ H E+
Sbjct: 2007 LDWIAVMCYDYHGQWDKITGHVAPMYAHPED 2037


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 276 AQRYSYKCESEVLPHGRIFFPP 341
           A+R +Y CE  +  HG+  + P
Sbjct: 59  AKRAAYDCEGVIRHHGQWNYSP 80


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 416 SSRYSKTYGTMRSH 457
           + RY +T GTM SH
Sbjct: 232 TGRYDETRGTMLSH 245


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 393  PIEEKKKKVAGILK 434
            PIE+ KKKV+  LK
Sbjct: 1206 PIEDDKKKVSAELK 1219


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 393  PIEEKKKKVAGILK 434
            PIE+ KKKV+  LK
Sbjct: 1206 PIEDDKKKVSAELK 1219


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +3

Query: 279 QRYSYKCESE 308
           QRY++KCE++
Sbjct: 42  QRYTWKCENQ 51


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 287 FLQVRIRSSSTW*NIFSTEPVKLSKKAC 370
           ++Q     + TW ++F+T    + K AC
Sbjct: 251 YIQYTETETKTWGSVFNTVLELMPKHAC 278


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 322 VEYFFHRACQVVEESLL 372
           +E+FF   C +  ESLL
Sbjct: 345 MEHFFSVKCSIQSESLL 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,463
Number of Sequences: 336
Number of extensions: 3754
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)