Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20090
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.17
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 32 0.40
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 1.2
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 30 1.6
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 30 1.6
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 30 1.6
At4g29910.1 68417.m04256 origin recognition complex subunit 5-re... 30 1.6
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 29 2.8
At5g17980.1 68418.m02109 C2 domain-containing protein contains I... 29 3.7
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 29 3.7
At3g21290.1 68416.m02690 dentin sialophosphoprotein-related cont... 29 3.7
At1g19490.1 68414.m02428 bZIP transcription factor family protei... 29 3.7
At5g67170.2 68418.m08468 SEC-C motif-containing protein / OTU-li... 28 4.9
At5g67170.1 68418.m08467 SEC-C motif-containing protein / OTU-li... 28 4.9
At5g51000.1 68418.m06323 F-box family protein contains F-box dom... 28 4.9
At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide famil... 28 4.9
At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide famil... 28 4.9
At3g60630.1 68416.m06784 scarecrow transcription factor family p... 28 4.9
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 28 4.9
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 28 4.9
At3g11950.1 68416.m01473 UbiA prenyltransferase family protein c... 28 4.9
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 28 4.9
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 28 4.9
At1g15780.1 68414.m01893 expressed protein 28 4.9
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 28 6.5
At1g51090.1 68414.m05744 heavy-metal-associated domain-containin... 28 6.5
At5g02090.1 68418.m00130 expressed protein 27 8.6
At4g26610.1 68417.m03835 protein kinase, putative similar to pro... 27 8.6
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 27 8.6
At3g54790.1 68416.m06063 armadillo/beta-catenin repeat family pr... 27 8.6
At2g31460.1 68415.m03843 hypothetical protein contains Pfam prof... 27 8.6
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 27 8.6
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 27 8.6
At1g03350.1 68414.m00314 BSD domain-containing protein contains ... 27 8.6
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 82 PSESPSTELPKPITSETPIDE-IAGPEESNFPPSASSGYGGEPDYVEEDQAFGPGT 246
PS S S E+ P+ + TP E I P +SN P S PD E +A P +
Sbjct: 839 PSSSESGEISTPVQAPTPDSEDIEAPSDSNHSPVFKSSPAPSPDSEPEVEAPVPSS 894
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 43 EQALEKFTKPDTKPSESPSTELPKP----ITSETPIDEIAGPEESNFPPSA 183
E + K KP++ ESP TE PKP E+P E PE+ P +
Sbjct: 456 EPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPES 506
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 7 EPTSTTKTAD----ISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEE 162
+PT T K + I+ LE+ +KP + S P PKP ETP E + P+E
Sbjct: 410 KPTPTPKAPEPKKEINPPNLEEPSKPKPEESPKPQQPSPKP---ETPSHEPSNPKE 462
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +1
Query: 79 KPSESPSTELPKPITS---ETPIDEIAGPEESNFP 174
KP ESP E PKP S + P E PEES P
Sbjct: 518 KPEESPKPEPPKPEESPKPQPPKQETPKPEESPKP 552
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 67 KPDTKPSESPSTELPKPITSETPIDEIAGPEESNFP 174
KP++ ES E PKP E+P E PEES P
Sbjct: 503 KPESPKQESSKQEPPKP--EESPKPEPPKPEESPKP 536
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +1
Query: 40 SEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGEP 207
SE +E + + PS SP + P P + P ++ + PP+ Y P
Sbjct: 894 SEPEVEAPKQSEATPSSSPPSSNPSPDVTAPPSEDNDDGDNFILPPNIGHQYASPP 949
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +1
Query: 4 HEPTSTTKTADISEQALEKFTKPDTKPSESPST------ELPKPITSETPIDEIAGPEES 165
H P+ + + A K P + P++SP+T + P P++S +P D+ A P +
Sbjct: 259 HAPSHSPAHSPSHSPATPKSPSPSSSPAQSPATPSPMTPQSPSPVSSPSP-DQSAAPSDQ 317
Query: 166 NFPPSAS 186
+ P + S
Sbjct: 318 STPLAPS 324
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +1
Query: 1 RHEPTSTTKTADISEQALEKFT-KPD-TKPSESPSTELPKPITSETPID-EIAGPEESNF 171
+HE + + E +K + KP +KP +SP E PKP S P +I P +
Sbjct: 439 KHESPKPEEPENKHELPKQKESPKPQPSKPEDSPKPEQPKPEESPKPEQPQIPEPTKPVS 498
Query: 172 PPSASSG 192
PP+ + G
Sbjct: 499 PPNEAQG 505
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 10 PTSTTKTADISEQALEKFTKPDTKPSE-SPSTELPKPITSETPIDEIAGPEESNFPPSAS 186
PT+ T + ++ TKP KP+E P+ E P+ + DE E+ +
Sbjct: 35 PTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMD 94
Query: 187 SGYGGEPDYVEED 225
D EED
Sbjct: 95 VDEDDSDDDEEED 107
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 10 PTSTTKTADISEQALEKFTKPDTKPSE-SPSTELPKPITSETPIDEIAGPEESNFPPSAS 186
PT+ T + ++ TKP KP+E P+ E P+ + DE E+ +
Sbjct: 118 PTAVTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMD 177
Query: 187 SGYGGEPDYVEED 225
D EED
Sbjct: 178 VDEDDSDDDEEED 190
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 70 PDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGEPDYVEE 222
P T P++SP+ P ++TP + P ES P+ S P V E
Sbjct: 38 PTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVSESSPPPTPVPE 88
>At4g29910.1 68417.m04256 origin recognition complex subunit
5-related (ORC5) contains weak similarity to Origin
recognition complex subunit 5 (Swiss-Prot:Q9WUV0) [Mus
musculus]
Length = 534
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 58 KFTKPDTKPSESPSTELPKPITSETP-IDEIAGPEESNFPPSASSGYGGEPDYV-EEDQA 231
K T+ T+ S S + E +PI S TP ID++ EES + S + G + + +
Sbjct: 9 KVTRRSTRSSASVTVENSEPIESHTPTIDDLTFGEESITIDAVLSNFPGRRSQIFDFIRL 68
Query: 232 FGPGTC 249
GP C
Sbjct: 69 MGPLDC 74
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 70 PDTKPSES-PSTELPK-PITSETPIDEIAGPEESNFPPSASS 189
P+T PS S P P PIT P D + P + PP +SS
Sbjct: 66 PNTPPSSSYPGLSPPPGPITLPNPPDSSSNPNSNPNPPESSS 107
>At5g17980.1 68418.m02109 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1049
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 25 KTADISEQALEKFTKPDTKPSESPSTELPKP-ITSETPIDEIAGPEESNFPPSASSGYGG 201
+T DI + E P P ES E PKP + P+ E A P S S
Sbjct: 173 ETNDIPAEVKETVKPPQPPPEESSPAEGPKPDEEASPPLQENATVGGEEPPASESDKNEA 232
Query: 202 EPDYVEE 222
E VEE
Sbjct: 233 EAKPVEE 239
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 76 TKPSESPSTELPKPIT-SETPIDEIAGPEESNFPPSASSGYGGEPDYVEEDQAFGPGTCR 252
T PS SP++ P + S +P P + P++ S P Y ++ P + +
Sbjct: 1674 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAK 1733
Query: 253 *AAKYMYQPN 282
+ Y P+
Sbjct: 1734 YSPSIAYSPS 1743
>At3g21290.1 68416.m02690 dentin sialophosphoprotein-related contains
weak similarity to Dentin sialophosphoprotein precursor
(Swiss-Prot:Q9NZW4) [Homo sapiens]
Length = 1192
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 85 SESPSTELPKPITSET---PIDEIAGPEESNFPPSASSGYGGEPD 210
SE ELP+P+ +T PI+E +SN PS S G + D
Sbjct: 886 SELELGELPEPLGEDTALKPIEEKTSFRQSNLKPSTSEKLGIDSD 930
>At1g19490.1 68414.m02428 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 471
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 37 ISEQALEKFTKPDTK-PSESPSTELPKPITSETP 135
+ EQ L K KPDTK P ESP + TS TP
Sbjct: 221 LKEQVL-KSVKPDTKEPEESPKPSQVEMSTSSTP 253
>At5g67170.2 68418.m08468 SEC-C motif-containing protein / OTU-like
cysteine protease family protein contains Pfam profiles
PF02338: OTU-like cysteine protease, PF02810: SEC-C
motif
Length = 374
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 37 ISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGE 204
I++Q +E T+ DT+ + + T PK S++P++ E ++SG E
Sbjct: 241 IADQGMESLTENDTETASASDTINPKH-ASDSPMENTEQAREELIEEESASGNNSE 295
>At5g67170.1 68418.m08467 SEC-C motif-containing protein / OTU-like
cysteine protease family protein contains Pfam profiles
PF02338: OTU-like cysteine protease, PF02810: SEC-C
motif
Length = 375
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 37 ISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGE 204
I++Q +E T+ DT+ + + T PK S++P++ E ++SG E
Sbjct: 242 IADQGMESLTENDTETASASDTINPKH-ASDSPMENTEQAREELIEEESASGNNSE 296
>At5g51000.1 68418.m06323 F-box family protein contains F-box domain
Pfam:PF00646
Length = 378
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 246 LSLGGKVYVSAQQIPRDDPCDFCFCFRSDIICLQ--QSCPPPIHGCHEEPI 392
+SL G VY A I +++ F D C + S P P H CHE+ +
Sbjct: 203 VSLKGNVYFIAHDILKEE----AFLLSFDFTCERFGPSLPLPFHCCHEDTV 249
>At4g20260.2 68417.m02960 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 1 RHEPTSTTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPS 180
+ E TK + E A+ + KP+ + + +T P P ETP+ E PE + P
Sbjct: 165 KEEIVEETKKGETPETAVVEEKKPEVEEKKEEAT--PAPAVVETPVKE---PETTTTAPV 219
Query: 181 A 183
A
Sbjct: 220 A 220
>At4g20260.1 68417.m02959 DREPP plasma membrane polypeptide family
protein contains Pfam profile: PF05558 DREPP plasma
membrane polypeptide
Length = 225
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 1 RHEPTSTTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPS 180
+ E TK + E A+ + KP+ + + +T P P ETP+ E PE + P
Sbjct: 165 KEEIVEETKKGETPETAVVEEKKPEVEEKKEEAT--PAPAVVETPVKE---PETTTTAPV 219
Query: 181 A 183
A
Sbjct: 220 A 220
>At3g60630.1 68416.m06784 scarecrow transcription factor family
protein scarecrow-like 6, Arabidopsis thaliana,
EMBL:AF036303
Length = 623
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 455 HHDYNNNNHITSSFPYPPYKGAA 523
+H+ NNNN T++ P PP+ AA
Sbjct: 274 NHNLNNNNDDTNNNPKPPFHRAA 296
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Frame = +1
Query: 76 TKPSESPSTELPKPITSETPIDEIAGPEE-------SNFPPSASSGYGGEPD 210
+ P +PST P T TP + P S+ PPSAS G PD
Sbjct: 129 SSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPSSLPPSASPPTNGTPD 180
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 67 KPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGEP 207
K KPS+ TE K ++ + P ++ P +PP G P
Sbjct: 466 KERNKPSDKSITEKKKKMSYQDPQHPVSAPPPQGYPPKEGYPPAGYP 512
>At3g11950.1 68416.m01473 UbiA prenyltransferase family protein
contains Pfam profile PF01040: UbiA prenyltransferase
family
Length = 954
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 13 TSTTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDE 144
++ TKT S ++K +TK S TE P I ET DE
Sbjct: 494 STETKTEAPSRIVMDKEGDEETKKSTETETEAPSRIVMETEKDE 537
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 25 KTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIA 150
KT D +E + E ++ KP S + E+P P T T + +IA
Sbjct: 424 KTVDDTEFSNETVSEVVVKPGSSETIEIPAPETEGTLVWDIA 465
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = +1
Query: 58 KFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGEPDYVEEDQAFG 237
+F P P+ +P+ P P T P D S P + GY G DY Q +
Sbjct: 16 QFQNPTPNPNPNPNPSPPAPATVAGPTDLTRNTYAS--APPFTGGY-GSADYSNYSQNYT 72
Query: 238 P 240
P
Sbjct: 73 P 73
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 52 LEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASS 189
L++FT PD S + KP +E PI+ + +S P + SS
Sbjct: 1019 LQEFTSPDGNILNSSTITSGKPSATELPIERLIRAVKSISPQALSS 1064
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 19 TTKTADISEQALEKFTKPDTKPSESPSTELPKPITSETPIDEIAGPEESNFPPSASS 189
TT ++ +S + P + PS SPS+ P ++ +P P PP +SS
Sbjct: 21 TTSSSSLSPSSSSPSLSP-SPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSS 76
>At1g51090.1 68414.m05744 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 171
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -2
Query: 424 GHSYRGQQKPCIGSS*HPCMGGGQLCCKQ 338
G Y QQ C G + GGG+ CC +
Sbjct: 133 GPYYEAQQYQCYGRPVYESWGGGRQCCHE 161
>At5g02090.1 68418.m00130 expressed protein
Length = 85
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 7 EPTSTTKTADISEQALEKFTKPDTKPSESPSTELPKPITSET 132
+ +S +T+D+ ++F +T PS SPS + IT T
Sbjct: 44 DSSSRFRTSDLRRFGTDRFGMLETTPSSSPSRVSTRNITKRT 85
>At4g26610.1 68417.m03835 protein kinase, putative similar to
protein kinase G11A [Oryza sativa] SWISS-PROT:P47997
Length = 506
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 67 KPDTKPSESPSTELP-KPITSETPIDEIAGPEESNFPPSASSGYGGEPDYVEE-DQAFGP 240
K + E+P T + ++ T D+++ +F PS+ S GGE + E+ DQ+
Sbjct: 14 KKEKGDKETPETSYSSQSVSVNTLADQVSST--LSFAPSSDSKTGGEVKFNEKSDQSGKS 71
Query: 241 GTCR 252
TCR
Sbjct: 72 NTCR 75
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +1
Query: 82 PSESPSTELPKPITSETPIDEIAGPEESNFPPSASSGYGGEP 207
P P P P +P + P S+ PPS S Y P
Sbjct: 392 PPPCPDVYKPPPYVYSSPPPYVYNPPPSSPPPSPSYSYSSPP 433
>At3g54790.1 68416.m06063 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 760
Score = 27.5 bits (58), Expect = 8.6
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 452 NHHDYNNNNHITSSFP-YPPYKGAAQRRGCQIKGHTYKVGEVVRASSGHVYTAHAAET-- 622
N NN NH S+ Y G HT K+ E +++ S V TA AAE
Sbjct: 439 NLESSNNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRH 498
Query: 623 VK*NAIQKRALQSRC 667
+ N+I+ R RC
Sbjct: 499 LTINSIENRVHIGRC 513
>At2g31460.1 68415.m03843 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 244
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 398 FLLPPIRVSCIDGDYTQCNHHDYNNNN 478
F+L P +VS DG+ Q + HD +N+N
Sbjct: 164 FVLVPAKVSVHDGNLPQDSGHDGHNDN 190
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Frame = +1
Query: 10 PTSTTKTADISEQALEKFTKPDTKPSESPSTELPKPIT--SETPIDEIAGPEESNFP-PS 180
P S+ K +++ P + SPS P P+ S+ D+ PE FP P+
Sbjct: 131 PASSPKPESLADSPSPPPPPPQPESPSSPSYPEPAPVPAPSDDDSDDDPEPETEYFPSPA 190
Query: 181 ASSGYGGEPDYVEEDQA 231
S G D D A
Sbjct: 191 PSPELGMAQDIKASDAA 207
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 461 DYNNNNHITSS-FPYPPYKGAAQRRGCQI 544
D N N I S+ FP PY +QRRGC++
Sbjct: 154 DKNWNRGIKSAKFPGVPYTFFSQRRGCKV 182
>At1g03350.1 68414.m00314 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 470
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 16 STTKTADISEQALEKFTKPDTKP---SESPSTELPKPITSETPIDEIAGPEESNFPPSAS 186
S K SE+ E+ + D P E+P + KP + E PI + P+ PS
Sbjct: 333 SEEKKETDSEEVPEEKSFVDAAPPASDEAPIQDSVKPTSDEAPIQDSVKPKSDEAAPSQD 392
Query: 187 S 189
S
Sbjct: 393 S 393
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,938,152
Number of Sequences: 28952
Number of extensions: 321665
Number of successful extensions: 1281
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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