Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20089
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L27706-1|AAA61061.1| 531|Homo sapiens chaperonin-like protein p... 104 3e-22
BC106942-1|AAI06943.1| 531|Homo sapiens chaperonin containing T... 104 3e-22
AM295155-1|CAL26601.1| 488|Homo sapiens chaperonin subunit 6A p... 104 3e-22
AF385084-1|AAK61354.1| 531|Homo sapiens heat shock protein prot... 104 3e-22
AB209728-1|BAD92965.1| 529|Homo sapiens chaperonin containing T... 104 3e-22
AB063318-1|BAB61032.1| 531|Homo sapiens acute morphine dependen... 104 3e-22
D78333-1|BAA11347.1| 540|Homo sapiens testis-specific TCP20 pro... 101 2e-21
BC027591-1|AAH27591.1| 530|Homo sapiens chaperonin containing T... 101 2e-21
BC026125-1|AAH26125.1| 530|Homo sapiens chaperonin containing T... 101 2e-21
M94083-1|AAA58676.1| 389|Homo sapiens chaperonin-like protein p... 85 2e-16
U38846-1|AAC50384.1| 539|Homo sapiens stimulator of TAR RNA bin... 50 6e-06
BC106934-1|AAI06935.1| 539|Homo sapiens chaperonin containing T... 50 6e-06
BC106933-1|AAI06934.1| 539|Homo sapiens chaperonin containing T... 50 6e-06
AF026291-1|AAC96010.1| 539|Homo sapiens chaperonin containing t... 50 6e-06
AC107081-1|AAY24140.1| 539|Homo sapiens unknown protein. 50 6e-06
X74801-1|CAA52808.1| 544|Homo sapiens gamma subunit of CCT chap... 48 3e-05
BC008019-1|AAH08019.1| 544|Homo sapiens chaperonin containing T... 48 3e-05
BC006501-1|AAH06501.3| 545|Homo sapiens chaperonin containing T... 48 3e-05
AY524046-1|AAS94255.1| 545|Homo sapiens PIG48 protein. 48 3e-05
AL589685-14|CAI14172.1| 276|Homo sapiens chaperonin containing ... 48 3e-05
AL589685-10|CAI14167.1| 545|Homo sapiens chaperonin containing ... 48 3e-05
AB208882-1|BAD92119.1| 577|Homo sapiens chaperonin containing T... 48 3e-05
AL589685-12|CAI14170.1| 168|Homo sapiens chaperonin containing ... 45 2e-04
AL589685-11|CAI14169.1| 161|Homo sapiens chaperonin containing ... 45 2e-04
AL589685-9|CAI14168.1| 522|Homo sapiens chaperonin containing T... 45 2e-04
D43950-1|BAA07894.2| 553|Homo sapiens KIAA0098 protein protein. 44 5e-04
BC035499-1|AAH35499.1| 541|Homo sapiens chaperonin containing T... 44 5e-04
BC006543-1|AAH06543.1| 541|Homo sapiens chaperonin containing T... 44 5e-04
BC002971-1|AAH02971.1| 539|Homo sapiens Unknown (protein for IM... 44 5e-04
AL589685-15|CAI14173.1| 188|Homo sapiens chaperonin containing ... 44 5e-04
X52882-1|CAA37064.1| 556|Homo sapiens t-complex polypeptide 1 p... 41 0.004
BT006969-1|AAP35615.1| 556|Homo sapiens t-complex 1 protein. 41 0.004
BC000665-1|AAH00665.1| 556|Homo sapiens t-complex 1 protein. 41 0.004
AL135914-7|CAI21851.1| 556|Homo sapiens t-complex 1 protein. 41 0.004
U83843-1|AAB41437.1| 412|Homo sapiens HIV-1 Nef interacting pro... 40 0.006
CR536511-1|CAG38749.1| 543|Homo sapiens CCT7 protein. 40 0.006
CR456719-1|CAG33000.1| 543|Homo sapiens CCT7 protein. 40 0.006
BC088351-1|AAH88351.1| 543|Homo sapiens chaperonin containing T... 40 0.006
BC019296-1|AAH19296.1| 543|Homo sapiens chaperonin containing T... 40 0.006
AK222478-1|BAD96198.1| 543|Homo sapiens chaperonin containing T... 40 0.006
AF026292-1|AAC96011.1| 543|Homo sapiens chaperonin containing t... 40 0.006
AC010913-3|AAX88902.1| 543|Homo sapiens unknown protein. 40 0.006
D42052-1|BAA07652.1| 539|Homo sapiens KIAA0002 protein. 40 0.011
D13627-1|BAA02792.2| 555|Homo sapiens KIAA0002 protein. 40 0.011
BC095470-1|AAH95470.1| 548|Homo sapiens chaperonin containing T... 40 0.011
BC072001-1|AAH72001.1| 548|Homo sapiens chaperonin containing T... 40 0.011
BC012584-1|AAH12584.1| 497|Homo sapiens CCT8 protein protein. 40 0.011
AL163249-4|CAB90433.1| 548|Homo sapiens T-complex protein 1 the... 40 0.011
AK222490-1|BAD96210.1| 548|Homo sapiens chaperonin containing T... 40 0.011
M34664-1|AAA36022.1| 573|Homo sapiens protein ( Human chaperoni... 31 3.9
U91327-1|AAB67249.1| 217|Homo sapiens T-complex protein 1, Beta... 31 5.1
BT019966-1|AAV38769.1| 535|Homo sapiens chaperonin containing T... 31 5.1
BC113516-1|AAI13517.1| 535|Homo sapiens chaperonin containing T... 31 5.1
BC113514-1|AAI13515.1| 535|Homo sapiens chaperonin containing T... 31 5.1
AF026293-1|AAC96012.1| 535|Homo sapiens chaperonin containing t... 31 5.1
AF026166-1|AAC98906.1| 535|Homo sapiens chaperonin-containing T... 31 5.1
>L27706-1|AAA61061.1| 531|Homo sapiens chaperonin-like protein
protein.
Length = 531
Score = 104 bits (250), Expect = 3e-22
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLLHEMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRIIT
Sbjct: 61 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 120
Query: 436 EGFDIARNKSLEVLESMKISIEI 504
EGF+ A+ K+L+ LE +K+S E+
Sbjct: 121 EGFEAAKEKALQFLEEVKVSREM 143
Score = 101 bits (243), Expect = 2e-21
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
MAA+ LNPKAE ARA ALAVNISAA+G+QDV++TNLGPKGTMKMLVSGAGDIK+TKD
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKD 59
Score = 85.4 bits (202), Expect = 2e-16
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +3
Query: 510 ENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
E L+DVARTSL+TKVH LADVLT+A VD++L I+ +P+DL M+EIMEMKHK+ T+T
Sbjct: 146 ETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDT 204
>BC106942-1|AAI06943.1| 531|Homo sapiens chaperonin containing
TCP1, subunit 6A (zeta 1) protein.
Length = 531
Score = 104 bits (250), Expect = 3e-22
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLLHEMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRIIT
Sbjct: 61 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 120
Query: 436 EGFDIARNKSLEVLESMKISIEI 504
EGF+ A+ K+L+ LE +K+S E+
Sbjct: 121 EGFEAAKEKALQFLEEVKVSREM 143
Score = 101 bits (243), Expect = 2e-21
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
MAA+ LNPKAE ARA ALAVNISAA+G+QDV++TNLGPKGTMKMLVSGAGDIK+TKD
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKD 59
Score = 85.4 bits (202), Expect = 2e-16
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +3
Query: 510 ENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
E L+DVARTSL+TKVH LADVLT+A VD++L I+ +P+DL M+EIMEMKHK+ T+T
Sbjct: 146 ETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDT 204
>AM295155-1|CAL26601.1| 488|Homo sapiens chaperonin subunit 6A
protein.
Length = 488
Score = 104 bits (250), Expect = 3e-22
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLLHEMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRIIT
Sbjct: 18 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 77
Query: 436 EGFDIARNKSLEVLESMKISIEI 504
EGF+ A+ K+L+ LE +K+S E+
Sbjct: 78 EGFEAAKEKALQFLEEVKVSREM 100
Score = 83.0 bits (196), Expect = 9e-16
Identities = 37/59 (62%), Positives = 49/59 (83%)
Frame = +3
Query: 510 ENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
E L+DVARTSL+TKV+ LADVLT+A VD++L I+ +P+DL M+EIMEMKHK+ T+T
Sbjct: 103 ETLIDVARTSLRTKVYAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDT 161
Score = 34.7 bits (76), Expect = 0.31
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 206 MKMLVSGAGDIKITKD 253
MKMLVSGAGDIK+TKD
Sbjct: 1 MKMLVSGAGDIKLTKD 16
>AF385084-1|AAK61354.1| 531|Homo sapiens heat shock protein
protein.
Length = 531
Score = 104 bits (250), Expect = 3e-22
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLLHEMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRIIT
Sbjct: 61 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 120
Query: 436 EGFDIARNKSLEVLESMKISIEI 504
EGF+ A+ K+L+ LE +K+S E+
Sbjct: 121 EGFEAAKEKALQFLEEVKVSREM 143
Score = 101 bits (243), Expect = 2e-21
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
MAA+ LNPKAE ARA ALAVNISAA+G+QDV++TNLGPKGTMKMLVSGAGDIK+TKD
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKD 59
Score = 85.4 bits (202), Expect = 2e-16
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +3
Query: 510 ENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
E L+DVARTSL+TKVH LADVLT+A VD++L I+ +P+DL M+EIMEMKHK+ T+T
Sbjct: 146 ETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDT 204
>AB209728-1|BAD92965.1| 529|Homo sapiens chaperonin containing
TCP1, subunit 6A isoform a variant protein.
Length = 529
Score = 104 bits (250), Expect = 3e-22
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLLHEMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRIIT
Sbjct: 59 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 118
Query: 436 EGFDIARNKSLEVLESMKISIEI 504
EGF+ A+ K+L+ LE +K+S E+
Sbjct: 119 EGFEAAKEKALQFLEEVKVSREM 141
Score = 98.3 bits (234), Expect = 2e-20
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = +2
Query: 83 AISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
A+ LNPKAE ARA ALAVNISAA+G+QDV++TNLGPKGTMKMLVSGAGDIK+TKD
Sbjct: 1 AVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKD 57
Score = 85.4 bits (202), Expect = 2e-16
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +3
Query: 510 ENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
E L+DVARTSL+TKVH LADVLT+A VD++L I+ +P+DL M+EIMEMKHK+ T+T
Sbjct: 144 ETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDT 202
>AB063318-1|BAB61032.1| 531|Homo sapiens acute morphine dependence
related protein 2 protein.
Length = 531
Score = 104 bits (250), Expect = 3e-22
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLLHEMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRIIT
Sbjct: 61 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 120
Query: 436 EGFDIARNKSLEVLESMKISIEI 504
EGF+ A+ K+L+ LE +K+S E+
Sbjct: 121 EGFEAAKEKALQFLEEVKVSREM 143
Score = 101 bits (243), Expect = 2e-21
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
MAA+ LNPKAE ARA ALAVNISAA+G+QDV++TNLGPKGTMKMLVSGAGDIK+TKD
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKD 59
Score = 85.4 bits (202), Expect = 2e-16
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +3
Query: 510 ENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
E L+DVARTSL+TKVH LADVLT+A VD++L I+ +P+DL M+EIMEMKHK+ T+T
Sbjct: 146 ETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDT 204
>D78333-1|BAA11347.1| 540|Homo sapiens testis-specific TCP20
protein.
Length = 540
Score = 101 bits (243), Expect = 2e-21
Identities = 54/100 (54%), Positives = 70/100 (70%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLL EMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRII
Sbjct: 60 NVLLDEMQIQHPTASLIAKVATAQDGVTGDGTTTNVLIIGELLKQADLYISEGLHPRIIA 119
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKLRS 555
EGF+ A+ K+LEVLE +K++ E+ +I +L V + L++
Sbjct: 120 EGFEAAKIKALEVLEEVKVTKEMKRKI--LLDVARTSLQT 157
Score = 80.2 bits (189), Expect = 6e-15
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +3
Query: 516 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
L+DVARTSL+TKVH LADVLT+ VD++ +R P P+DL MVEIMEMKHK T+T
Sbjct: 147 LLDVARTSLQTKVHAELADVLTEVVVDSLFPVRRPPYPIDLFMVEIMEMKHKLGTDT 203
Score = 79.8 bits (188), Expect = 8e-15
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
MAAI +N KAE ARA Q L ++I A +QDV++TNLGPKGTMKMLVSGAGDIK+TKD
Sbjct: 1 MAAIKAVNSKAEVARARQ-LWLSIYAPPRVQDVLRTNLGPKGTMKMLVSGAGDIKLTKD 58
>BC027591-1|AAH27591.1| 530|Homo sapiens chaperonin containing
TCP1, subunit 6B (zeta 2) protein.
Length = 530
Score = 101 bits (243), Expect = 2e-21
Identities = 54/100 (54%), Positives = 70/100 (70%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLL EMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRII
Sbjct: 61 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA 120
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKLRS 555
EGF+ A+ K+LEVLE +K++ E+ +I +L V + L++
Sbjct: 121 EGFEAAKIKALEVLEEVKVTKEMKRKI--LLDVARTSLQT 158
Score = 94.3 bits (224), Expect = 4e-19
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
MAAI +N KAE ARA ALAVNI AA+G+QDV++TNLGPKGTMKML SGAGDIK+TKD
Sbjct: 1 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKD 59
Score = 86.6 bits (205), Expect = 7e-17
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = +3
Query: 516 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
L+DVARTSL+TKVH LADVLT+ VD+VL +R PG P+DL MVEIMEMKHK T+T
Sbjct: 148 LLDVARTSLQTKVHAELADVLTEVVVDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDT 204
>BC026125-1|AAH26125.1| 530|Homo sapiens chaperonin containing
TCP1, subunit 6B (zeta 2) protein.
Length = 530
Score = 101 bits (243), Expect = 2e-21
Identities = 54/100 (54%), Positives = 70/100 (70%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLL EMQIQHPTASLIA+ VL+IGELLKQAD++ISEGLHPRII
Sbjct: 61 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA 120
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKLRS 555
EGF+ A+ K+LEVLE +K++ E+ +I +L V + L++
Sbjct: 121 EGFEAAKIKALEVLEEVKVTKEMKRKI--LLDVARTSLQT 158
Score = 94.3 bits (224), Expect = 4e-19
Identities = 45/59 (76%), Positives = 51/59 (86%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
MAAI +N KAE ARA ALAVNI AA+G+QDV++TNLGPKGTMKML SGAGDIK+TKD
Sbjct: 1 MAAIKAVNSKAEVARAQAALAVNICAARGLQDVLRTNLGPKGTMKMLASGAGDIKLTKD 59
Score = 86.6 bits (205), Expect = 7e-17
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = +3
Query: 516 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
L+DVARTSL+TKVH LADVLT+ VD+VL +R PG P+DL MVEIMEMKHK T+T
Sbjct: 148 LLDVARTSLQTKVHAELADVLTEVVVDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDT 204
>M94083-1|AAA58676.1| 389|Homo sapiens chaperonin-like protein
protein.
Length = 389
Score = 85.4 bits (202), Expect = 2e-16
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +3
Query: 510 ENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
E L+DVARTSL+TKVH LADVLT+A VD++L I+ +P+DL M+EIMEMKHK+ T+T
Sbjct: 4 ETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDT 62
>U38846-1|AAC50384.1| 539|Homo sapiens stimulator of TAR RNA
binding protein.
Length = 539
Score = 50.4 bits (115), Expect = 6e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 119 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ AQ NISAAK + D ++T+LGPKG KM+ G GD+ IT D
Sbjct: 29 KPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITND 73
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L +MQ+ HP A ++ V++ G LL + +G+HP II+E
Sbjct: 77 ILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISES 136
Query: 442 FDIARNKSLEVLESMKISIEIALR 513
F A K +E+L M +E++ R
Sbjct: 137 FQKALEKGIEILTDMSRPVELSDR 160
>BC106934-1|AAI06935.1| 539|Homo sapiens chaperonin containing
TCP1, subunit 4 (delta) protein.
Length = 539
Score = 50.4 bits (115), Expect = 6e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 119 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ AQ NISAAK + D ++T+LGPKG KM+ G GD+ IT D
Sbjct: 29 KPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITND 73
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L +MQ+ HP A ++ V++ G LL + +G+HP II+E
Sbjct: 77 ILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISES 136
Query: 442 FDIARNKSLEVLESMKISIEIALR 513
F A K +E+L M +E++ R
Sbjct: 137 FQKALEKGIEILTDMSRPVELSDR 160
>BC106933-1|AAI06934.1| 539|Homo sapiens chaperonin containing
TCP1, subunit 4 (delta) protein.
Length = 539
Score = 50.4 bits (115), Expect = 6e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 119 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ AQ NISAAK + D ++T+LGPKG KM+ G GD+ IT D
Sbjct: 29 KPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITND 73
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L +MQ+ HP A ++ V++ G LL + +G+HP II+E
Sbjct: 77 ILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISES 136
Query: 442 FDIARNKSLEVLESMKISIEIALR 513
F A K +E+L M +E++ R
Sbjct: 137 FQKALEKGIEILTDMSRPVELSDR 160
>AF026291-1|AAC96010.1| 539|Homo sapiens chaperonin containing
t-complex polypeptide 1, delta subunit protein.
Length = 539
Score = 50.4 bits (115), Expect = 6e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 119 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ AQ NISAAK + D ++T+LGPKG KM+ G GD+ IT D
Sbjct: 29 KPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITND 73
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L +MQ+ HP A ++ V++ G LL + +G+HP II+E
Sbjct: 77 ILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISES 136
Query: 442 FDIARNKSLEVLESMKISIEIALR 513
F A K +E+L M +E++ R
Sbjct: 137 FQKALEKGIEILTDMSRPVELSDR 160
>AC107081-1|AAY24140.1| 539|Homo sapiens unknown protein.
Length = 539
Score = 50.4 bits (115), Expect = 6e-06
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +2
Query: 119 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ AQ NISAAK + D ++T+LGPKG KM+ G GD+ IT D
Sbjct: 29 KPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITND 73
Score = 50.4 bits (115), Expect = 6e-06
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L +MQ+ HP A ++ V++ G LL + +G+HP II+E
Sbjct: 77 ILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISES 136
Query: 442 FDIARNKSLEVLESMKISIEIALR 513
F A K +E+L M +E++ R
Sbjct: 137 FQKALEKGIEILTDMSRPVELSDR 160
>X74801-1|CAA52808.1| 544|Homo sapiens gamma subunit of CCT
chaperonin protein.
Length = 544
Score = 48.0 bits (109), Expect = 3e-05
Identities = 23/98 (23%), Positives = 49/98 (50%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
N +L E+Q+QHP A + ++L GE+L A+ F+ + +HP ++
Sbjct: 63 NAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVI 122
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
+ A + + L+ + I ++I+ +ML +++S +
Sbjct: 123 SAYRKALDDMISTLKKISIPVDIS-DSDMMLNIINSSI 159
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 12 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 61
>BC008019-1|AAH08019.1| 544|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 544
Score = 48.0 bits (109), Expect = 3e-05
Identities = 23/98 (23%), Positives = 49/98 (50%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
N +L E+Q+QHP A + ++L GE+L A+ F+ + +HP ++
Sbjct: 63 NAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVI 122
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
+ A + + L+ + I ++I+ +ML +++S +
Sbjct: 123 SAYRKALDDMISTLKKISIPVDIS-DSDMMLNIINSSI 159
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 12 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 61
>BC006501-1|AAH06501.3| 545|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 545
Score = 48.0 bits (109), Expect = 3e-05
Identities = 23/98 (23%), Positives = 49/98 (50%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
N +L E+Q+QHP A + ++L GE+L A+ F+ + +HP ++
Sbjct: 64 NAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVI 123
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
+ A + + L+ + I ++I+ +ML +++S +
Sbjct: 124 SAYRKALDDMISTLKKISIPVDIS-DSDMMLNIINSSI 160
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 62
>AY524046-1|AAS94255.1| 545|Homo sapiens PIG48 protein.
Length = 545
Score = 48.0 bits (109), Expect = 3e-05
Identities = 23/98 (23%), Positives = 49/98 (50%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
N +L E+Q+QHP A + ++L GE+L A+ F+ + +HP ++
Sbjct: 64 NAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVI 123
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
+ A + + L+ + I ++I+ +ML +++S +
Sbjct: 124 SAYRKALDDMISTLKKISIPVDIS-DSDMMLNIINSSI 160
Score = 42.3 bits (95), Expect = 0.002
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G +T D
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGNVMTND 62
>AL589685-14|CAI14172.1| 276|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 276
Score = 48.0 bits (109), Expect = 3e-05
Identities = 23/98 (23%), Positives = 49/98 (50%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
N +L E+Q+QHP A + ++L GE+L A+ F+ + +HP ++
Sbjct: 88 NAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVI 147
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
+ A + + L+ + I ++I+ +ML +++S +
Sbjct: 148 SAYRKALDDMISTLKKISIPVDIS-DSDMMLNIINSSI 184
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 37 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 86
>AL589685-10|CAI14167.1| 545|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 545
Score = 48.0 bits (109), Expect = 3e-05
Identities = 23/98 (23%), Positives = 49/98 (50%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
N +L E+Q+QHP A + ++L GE+L A+ F+ + +HP ++
Sbjct: 64 NAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVI 123
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
+ A + + L+ + I ++I+ +ML +++S +
Sbjct: 124 SAYRKALDDMISTLKKISIPVDIS-DSDMMLNIINSSI 160
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 62
>AB208882-1|BAD92119.1| 577|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) variant protein.
Length = 577
Score = 48.0 bits (109), Expect = 3e-05
Identities = 23/98 (23%), Positives = 49/98 (50%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
N +L E+Q+QHP A + ++L GE+L A+ F+ + +HP ++
Sbjct: 96 NAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVI 155
Query: 436 EGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
+ A + + L+ + I ++I+ +ML +++S +
Sbjct: 156 SAYRKALDDMISTLKKISIPVDIS-DSDMMLNIINSSI 192
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 45 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 94
>AL589685-12|CAI14170.1| 168|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 168
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 62
>AL589685-11|CAI14169.1| 161|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 161
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 62
>AL589685-9|CAI14168.1| 522|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 522
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 98 NPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N K E R Q+ NI+AAK I D+++T LGPK MKML+ G I +T D
Sbjct: 13 NTKRESGRKVQS--GNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTND 62
>D43950-1|BAA07894.2| 553|Homo sapiens KIAA0098 protein protein.
Length = 553
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 128 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+AL +I AAK + + M+T+LGP G KM+V GD+ +T D
Sbjct: 44 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTND 85
>BC035499-1|AAH35499.1| 541|Homo sapiens chaperonin containing
TCP1, subunit 5 (epsilon) protein.
Length = 541
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 128 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+AL +I AAK + + M+T+LGP G KM+V GD+ +T D
Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTND 73
>BC006543-1|AAH06543.1| 541|Homo sapiens chaperonin containing
TCP1, subunit 5 (epsilon) protein.
Length = 541
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 128 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+AL +I AAK + + M+T+LGP G KM+V GD+ +T D
Sbjct: 32 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTND 73
>BC002971-1|AAH02971.1| 539|Homo sapiens Unknown (protein for
IMAGE:3543711) protein.
Length = 539
Score = 44.0 bits (99), Expect = 5e-04
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +2
Query: 128 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+AL +I AAK + + M+T+LGP G KM+V GD+ +T D
Sbjct: 30 EALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTND 71
>AL589685-15|CAI14173.1| 188|Homo sapiens chaperonin containing
TCP1, subunit 3 (gamma) protein.
Length = 188
Score = 44.0 bits (99), Expect = 5e-04
Identities = 24/106 (22%), Positives = 51/106 (48%)
Frame = +1
Query: 232 GHKDHQGCNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISE 411
G K G N+ ++Q+QHP A + ++L GE+L A+ F+ +
Sbjct: 43 GRKVQSG-NINAAKIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQ 101
Query: 412 GLHPRIITEGFDIARNKSLEVLESMKISIEIALRI*LMLPVLHSKL 549
+HP ++ + A + + L+ + I ++I+ +ML +++S +
Sbjct: 102 QMHPTVVISAYRKALDDMISTLKKISIPVDIS-DSDMMLNIINSSI 146
>X52882-1|CAA37064.1| 556|Homo sapiens t-complex polypeptide 1
protein.
Length = 556
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N+ AA I +++K++LGP G KMLV GD+ IT D
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITND 57
Score = 37.1 bits (82), Expect = 0.059
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L ++++HP A ++ V++ ELLK AD + + +HP + G
Sbjct: 61 ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG 120
Query: 442 FDIARNKSLEVL 477
+ +A +++ +
Sbjct: 121 YRLACKEAVRYI 132
>BT006969-1|AAP35615.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N+ AA I +++K++LGP G KMLV GD+ IT D
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITND 57
Score = 37.1 bits (82), Expect = 0.059
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L ++++HP A ++ V++ ELLK AD + + +HP + G
Sbjct: 61 ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG 120
Query: 442 FDIARNKSLEVL 477
+ +A +++ +
Sbjct: 121 YRLACKEAVRYI 132
>BC000665-1|AAH00665.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N+ AA I +++K++LGP G KMLV GD+ IT D
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITND 57
Score = 37.1 bits (82), Expect = 0.059
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L ++++HP A ++ V++ ELLK AD + + +HP + G
Sbjct: 61 ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG 120
Query: 442 FDIARNKSLEVL 477
+ +A +++ +
Sbjct: 121 YRLACKEAVRYI 132
>AL135914-7|CAI21851.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 41.1 bits (92), Expect = 0.004
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N+ AA I +++K++LGP G KMLV GD+ IT D
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITND 57
Score = 37.1 bits (82), Expect = 0.059
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L ++++HP A ++ V++ ELLK AD + + +HP + G
Sbjct: 61 ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG 120
Query: 442 FDIARNKSLEVL 477
+ +A +++ +
Sbjct: 121 YRLACKEAVRYI 132
>U83843-1|AAB41437.1| 412|Homo sapiens HIV-1 Nef interacting
protein protein.
Length = 412
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + HP A + LL E LKQ ++ EGLHP+II
Sbjct: 53 ILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 112
Query: 442 FDIARNKSLEVLESMKISIEIALRI 516
F A ++ ++ + ++++ A ++
Sbjct: 113 FRTATQLAVNKIKEIAVTVKKADKV 137
Score = 37.9 bits (84), Expect = 0.034
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 134 LAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
L NISA + I + ++T LGP+G K++V G G I+ D
Sbjct: 10 LVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISND 49
>CR536511-1|CAG38749.1| 543|Homo sapiens CCT7 protein.
Length = 543
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + HP A + LL E LKQ ++ EGLHP+II
Sbjct: 65 ILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 124
Query: 442 FDIARNKSLEVLESMKISIEIALRI 516
F A ++ ++ + ++++ A ++
Sbjct: 125 FRTATQLAVNKIKEIAVTVKKADKV 149
Score = 39.9 bits (89), Expect = 0.008
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 86 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ LL + ++ L NISA + I + ++T LGP+G K++V G G I+ D
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISND 61
>CR456719-1|CAG33000.1| 543|Homo sapiens CCT7 protein.
Length = 543
Score = 40.3 bits (90), Expect = 0.006
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 86 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ LL + ++ L NISA + I + ++T LGP+G K++V G G I+ D
Sbjct: 6 VILLKEGTDSSQGTPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISND 61
Score = 38.7 bits (86), Expect = 0.019
Identities = 20/85 (23%), Positives = 37/85 (43%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + HP A LL E LKQ ++ EGLHP+II
Sbjct: 65 ILKLLDVVHPAAKTSVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 124
Query: 442 FDIARNKSLEVLESMKISIEIALRI 516
F A ++ ++ + ++++ A ++
Sbjct: 125 FRTATQLAVNKIKEIAVTVKKADKV 149
>BC088351-1|AAH88351.1| 543|Homo sapiens chaperonin containing
TCP1, subunit 7 (eta) protein.
Length = 543
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + HP A + LL E LKQ ++ EGLHP+II
Sbjct: 65 ILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 124
Query: 442 FDIARNKSLEVLESMKISIEIALRI 516
F A ++ ++ + ++++ A ++
Sbjct: 125 FRTATQLAVNKIKEIAVTVKKADKV 149
Score = 39.9 bits (89), Expect = 0.008
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 86 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ LL + ++ L NISA + I + ++T LGP+G K++V G G I+ D
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISND 61
>BC019296-1|AAH19296.1| 543|Homo sapiens chaperonin containing
TCP1, subunit 7 (eta) protein.
Length = 543
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + HP A + LL E LKQ ++ EGLHP+II
Sbjct: 65 ILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 124
Query: 442 FDIARNKSLEVLESMKISIEIALRI 516
F A ++ ++ + ++++ A ++
Sbjct: 125 FRTATQLAVNKIKEIAVTVKKADKV 149
Score = 39.9 bits (89), Expect = 0.008
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 86 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ LL + ++ L NISA + I + ++T LGP+G K++V G G I+ D
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISND 61
>AK222478-1|BAD96198.1| 543|Homo sapiens chaperonin containing
TCP1, subunit 7 (eta) variant protein.
Length = 543
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + HP A + LL E LKQ ++ EGLHP+II
Sbjct: 65 ILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 124
Query: 442 FDIARNKSLEVLESMKISIEIALRI 516
F A ++ ++ + ++++ A ++
Sbjct: 125 FRTATQLAVNKIKEIAVTVKKADKV 149
Score = 39.9 bits (89), Expect = 0.008
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 86 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ LL + ++ L NISA + I + ++T LGP+G K++V G G I+ D
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISND 61
>AF026292-1|AAC96011.1| 543|Homo sapiens chaperonin containing
t-complex polypeptide 1, eta subunit protein.
Length = 543
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + HP A + LL E LKQ ++ EGLHP+II
Sbjct: 65 ILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 124
Query: 442 FDIARNKSLEVLESMKISIEIALRI 516
F A ++ ++ + ++++ A ++
Sbjct: 125 FRTATQLAVNKIKEIAVTVKKADKV 149
Score = 39.9 bits (89), Expect = 0.008
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 86 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ LL + ++ L NISA + I + ++T LGP+G K++V G G I+ D
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISND 61
>AC010913-3|AAX88902.1| 543|Homo sapiens unknown protein.
Length = 543
Score = 40.3 bits (90), Expect = 0.006
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + HP A + LL E LKQ ++ EGLHP+II
Sbjct: 65 ILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRA 124
Query: 442 FDIARNKSLEVLESMKISIEIALRI 516
F A ++ ++ + ++++ A ++
Sbjct: 125 FRTATQLAVNKIKEIAVTVKKADKV 149
Score = 39.9 bits (89), Expect = 0.008
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 86 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+ LL + ++ L NISA + I + ++T LGP+G K++V G G I+ D
Sbjct: 6 VILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISND 61
>D42052-1|BAA07652.1| 539|Homo sapiens KIAA0002 protein.
Length = 539
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L E+++QHP A +I ++ G LL+ A+ + GL + EG
Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEG 131
Query: 442 FDIARNKSLEVLESM 486
++IA K+ E+L ++
Sbjct: 132 YEIACRKAHEILPNL 146
>D13627-1|BAA02792.2| 555|Homo sapiens KIAA0002 protein.
Length = 555
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L E+++QHP A +I ++ G LL+ A+ + GL + EG
Sbjct: 79 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEG 138
Query: 442 FDIARNKSLEVLESM 486
++IA K+ E+L ++
Sbjct: 139 YEIACRKAHEILPNL 153
>BC095470-1|AAH95470.1| 548|Homo sapiens chaperonin containing
TCP1, subunit 8 (theta) protein.
Length = 548
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L E+++QHP A +I ++ G LL+ A+ + GL + EG
Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEG 131
Query: 442 FDIARNKSLEVLESM 486
++IA K+ E+L ++
Sbjct: 132 YEIACRKAHEILPNL 146
>BC072001-1|AAH72001.1| 548|Homo sapiens chaperonin containing
TCP1, subunit 8 (theta) protein.
Length = 548
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L E+++QHP A +I ++ G LL+ A+ + GL + EG
Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEG 131
Query: 442 FDIARNKSLEVLESM 486
++IA K+ E+L ++
Sbjct: 132 YEIACRKAHEILPNL 146
>BC012584-1|AAH12584.1| 497|Homo sapiens CCT8 protein protein.
Length = 497
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L E+++QHP A +I ++ G LL+ A+ + GL + EG
Sbjct: 21 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEG 80
Query: 442 FDIARNKSLEVLESM 486
++IA K+ E+L ++
Sbjct: 81 YEIACRKAHEILPNL 95
>AL163249-4|CAB90433.1| 548|Homo sapiens T-complex protein 1 theta
subunit protein.
Length = 548
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L E+++QHP A +I ++ G LL+ A+ + GL + EG
Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEG 131
Query: 442 FDIARNKSLEVLESM 486
++IA K+ E+L ++
Sbjct: 132 YEIACRKAHEILPNL 146
>AK222490-1|BAD96210.1| 548|Homo sapiens chaperonin containing
TCP1, subunit 8 (theta) variant protein.
Length = 548
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L E+++QHP A +I ++ G LL+ A+ + GL + EG
Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEG 131
Query: 442 FDIARNKSLEVLESM 486
++IA K+ E+L ++
Sbjct: 132 YEIACRKAHEILPNL 146
>M34664-1|AAA36022.1| 573|Homo sapiens protein ( Human chaperonin
(HSP60) mRNA, complete cds. ).
Length = 573
Score = 31.1 bits (67), Expect = 3.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 125 AQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDAM 259
A A A+ + + D + +GPKG ++ G G K+TKD +
Sbjct: 34 ADARALMLQGVDLLADAVAVTMGPKGRTVIIEQGWGSPKVTKDGV 78
>U91327-1|AAB67249.1| 217|Homo sapiens T-complex protein 1, Beta
subunit (TCP-1-BETA) protein.
Length = 217
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELL++A+ I++ +HP+ I G
Sbjct: 70 ILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAG 129
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L S +
Sbjct: 130 WREATKAAREALLSSAV 146
>BT019966-1|AAV38769.1| 535|Homo sapiens chaperonin containing
TCP1, subunit 2 (beta) protein.
Length = 535
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELL++A+ I++ +HP+ I G
Sbjct: 70 ILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAG 129
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L S +
Sbjct: 130 WREATKAAREALLSSAV 146
>BC113516-1|AAI13517.1| 535|Homo sapiens chaperonin containing
TCP1, subunit 2 (beta) protein.
Length = 535
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELL++A+ I++ +HP+ I G
Sbjct: 70 ILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAG 129
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L S +
Sbjct: 130 WREATKAAREALLSSAV 146
>BC113514-1|AAI13515.1| 535|Homo sapiens chaperonin containing
TCP1, subunit 2 (beta) protein.
Length = 535
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELL++A+ I++ +HP+ I G
Sbjct: 70 ILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAG 129
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L S +
Sbjct: 130 WREATKAAREALLSSAV 146
>AF026293-1|AAC96012.1| 535|Homo sapiens chaperonin containing
t-complex polypeptide 1, beta subunit protein.
Length = 535
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELL++A+ I++ +HP+ I G
Sbjct: 70 ILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAG 129
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L S +
Sbjct: 130 WREATKAAREALLSSAV 146
>AF026166-1|AAC98906.1| 535|Homo sapiens chaperonin-containing
TCP-1 beta subunit homolog protein.
Length = 535
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELL++A+ I++ +HP+ I G
Sbjct: 70 ILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAG 129
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L S +
Sbjct: 130 WREATKAAREALLSSAV 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,196,154
Number of Sequences: 237096
Number of extensions: 1740809
Number of successful extensions: 3196
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 2735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3179
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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