Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20089
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 93 1e-19
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 93 1e-19
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 52 5e-07
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 47 1e-05
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 42 4e-04
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 42 4e-04
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 41 0.001
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 41 0.001
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 41 0.001
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 38 0.009
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 38 0.009
Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical pr... 32 0.34
AY037797-1|AAK94762.1| 412|Caenorhabditis elegans GLY-18 protein. 32 0.34
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 32 0.34
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 29 4.1
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 29 4.1
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 93.5 bits (222), Expect = 1e-19
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKD
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKD 59
Score = 90.6 bits (215), Expect = 9e-19
Identities = 45/78 (57%), Positives = 53/78 (67%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 436 EGFDIARNKSLEVLESMK 489
EGF+ A K+LE+LE K
Sbjct: 121 EGFEWANTKTLELLEKFK 138
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +3
Query: 516 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
LV+V RT+L+TK+H LAD +T+ VDAVL IR G+ DLHMVE MEM H + +T
Sbjct: 148 LVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMVEKMEMHHDSDMDT 204
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 93.5 bits (222), Expect = 1e-19
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
M++I LNPKAE AR A AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKD
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKD 59
Score = 90.6 bits (215), Expect = 9e-19
Identities = 45/78 (57%), Positives = 53/78 (67%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ + EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 436 EGFDIARNKSLEVLESMK 489
EGF+ A K+LE+LE K
Sbjct: 121 EGFEWANTKTLELLEKFK 138
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +3
Query: 516 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHKTATET 686
LV+V RT+L+TK+H LAD +T+ VDAVL IR G+ DLHMVE MEM H + +T
Sbjct: 148 LVEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGEEPDLHMVEKMEMHHDSDMDT 204
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
++ +M +QH A L+ V+L G LL++A+ I G+HP I +G
Sbjct: 78 IMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADG 137
Query: 442 FDIARNKSLEVLESM 486
FD+A K+LE L+S+
Sbjct: 138 FDLACKKALETLDSI 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 128 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT D
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 480 IYEDFN*DCTENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEI 653
I + F + E LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 152 ISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKM 210
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
++ +M +QH A L+ V+L G LL++A+ I G+HP I +G
Sbjct: 78 IMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADG 137
Query: 442 FDIARNKSLEVLESM 486
FD+A K+LE L+S+
Sbjct: 138 FDLACKKALETLDSI 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 128 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT D
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 480 IYEDFN*DCTENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEI 653
I + F + E LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 152 ISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKM 210
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
++ +M +QH A L+ V+L G LL++A+ I G+HP I +G
Sbjct: 78 IMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADG 137
Query: 442 FDIARNKSLEVLESM 486
FD+A K+LE L+S+
Sbjct: 138 FDLACKKALETLDSI 152
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +2
Query: 128 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT D
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 480 IYEDFN*DCTENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEI 653
I + F + E LV+ A+TSL +K+ + VDAVL++ K V+ M+++
Sbjct: 152 ISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIESKDVNFEMIKM 210
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
NI AAK + D ++T+LGP+G KM+ SG GD+ IT D
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITND 72
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
NI AAK + D ++T+LGP+G KM+ SG GD+ IT D
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITND 72
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 244
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 245 TKD 253
T D
Sbjct: 61 TND 63
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELLK+A+ +++ +HP+ I G
Sbjct: 67 ILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISG 126
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L+ I
Sbjct: 127 YRRALGIAQESLKKSSI 143
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 244
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 245 TKD 253
T D
Sbjct: 61 TND 63
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELLK+A+ +++ +HP+ I G
Sbjct: 67 ILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISG 126
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L+ I
Sbjct: 127 YRRALGIAQESLKKSSI 143
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 77 MAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 244
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 245 TKD 253
T D
Sbjct: 61 TND 63
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + + +P A ++ +L ELLK+A+ +++ +HP+ I G
Sbjct: 67 ILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISG 126
Query: 442 FDIARNKSLEVLESMKI 492
+ A + E L+ I
Sbjct: 127 YRRALGIAQESLKKSSI 143
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N++AA I +++K++LGP G KMLV GD+ +T D
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTND 61
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/72 (20%), Positives = 36/72 (50%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L +++++HP ++ V++ ELLK+AD + + +HP I G
Sbjct: 65 ILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIING 124
Query: 442 FDIARNKSLEVL 477
+ +A ++++ +
Sbjct: 125 YRLACKEAVKYI 136
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
N++AA I +++K++LGP G KMLV GD+ +T D
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTND 61
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/72 (20%), Positives = 36/72 (50%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L +++++HP ++ V++ ELLK+AD + + +HP I G
Sbjct: 65 ILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIING 124
Query: 442 FDIARNKSLEVL 477
+ +A ++++ +
Sbjct: 125 YRLACKEAVKYI 136
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +2
Query: 143 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKD 253
NI+A K I DV++T+LGP+ +KML+ G I +T D
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTND 64
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/63 (20%), Positives = 28/63 (44%)
Frame = +1
Query: 256 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIIT 435
N +L E+ ++HP A + ++L GE++ A ++ + HP +I
Sbjct: 66 NAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLII 125
Query: 436 EGF 444
+ +
Sbjct: 126 KAY 128
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 65 ILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRA 124
Query: 442 FDIARNKSLEVLESMKISI 498
A K+L+ L ++I I
Sbjct: 125 IGKACEKTLKNLADLEIKI 143
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/79 (27%), Positives = 36/79 (45%)
Frame = +1
Query: 262 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 441
+L + I P AS + V+L E+LKQ FI +G+HP+++
Sbjct: 65 ILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRA 124
Query: 442 FDIARNKSLEVLESMKISI 498
A K+L+ L ++I I
Sbjct: 125 IGKACEKTLKNLADLEIKI 143
>Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical
protein F22D6.11 protein.
Length = 440
Score = 32.3 bits (70), Expect = 0.34
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 161 GIQDVMKTNLGPKGTMKMLVSGAGDIKITKDAMFCYMRCKSSTLQPH*LLERQPLKMMPL 340
G+ +KTNL +K L +G +++I K + +R K+ T P L + ++P
Sbjct: 213 GVDIPLKTNLEMVQILKHL-NGTANVEI-KPYQYQRLRGKNETQSPLPLFKSSLSSLIPR 270
Query: 341 EMVQHLLSSSLESYL 385
E HL SSS+ L
Sbjct: 271 EAANHLSSSSIPQQL 285
>AY037797-1|AAK94762.1| 412|Caenorhabditis elegans GLY-18 protein.
Length = 412
Score = 32.3 bits (70), Expect = 0.34
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 161 GIQDVMKTNLGPKGTMKMLVSGAGDIKITKDAMFCYMRCKSSTLQPH*LLERQPLKMMPL 340
G+ +KTNL +K L +G +++I K + +R K+ T P L + ++P
Sbjct: 185 GVDIPLKTNLEMVQILKHL-NGTANVEI-KPYQYQRLRGKNETQSPLPLFKSSLSSLIPR 242
Query: 341 EMVQHLLSSSLESYL 385
E HL SSS+ L
Sbjct: 243 EAANHLSSSSIPQQL 257
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 233 DIKITKDAMFCYMRCKSSTLQPH*LLERQPLKMMPLEMVQHLLSSSLESYLNRPTYSSVK 412
D + ++D C+ C S QP + ++PLK P+E V H +E Y N+ SS+
Sbjct: 457 DHECSEDEKCCFNGCTLSCTQPEDYVLKKPLK--PIEPVMHYQPGDVEKY-NKGHLSSLV 513
Query: 413 A 415
A
Sbjct: 514 A 514
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 116 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDAM 259
A QA+ V ++ + D + +GPKG ++ G KITKD +
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGV 69
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 116 ARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDAM 259
A QA+ V ++ + D + +GPKG ++ G KITKD +
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGV 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,496,917
Number of Sequences: 27780
Number of extensions: 269733
Number of successful extensions: 615
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -