Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20088
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 274 4e-74
03_01_0547 + 4093196-4093657,4094267-4095148 274 4e-74
03_01_0544 + 4082528-4082989,4083585-4084466 274 4e-74
03_01_0543 + 4076981-4077442,4078145-4079026 274 4e-74
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 161 6e-40
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 161 6e-40
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 132 2e-31
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 110 9e-25
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 96 3e-20
02_04_0462 + 23131433-23132836 86 2e-17
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 84 9e-17
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 53 3e-07
04_01_0103 + 1082077-1082167,1083037-1085477 45 7e-05
02_04_0017 + 18937774-18937864,18938505-18940945 45 7e-05
02_04_0148 - 20198407-20201424 44 9e-05
03_05_0511 + 25056018-25059107 44 1e-04
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 43 2e-04
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 43 3e-04
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 43 3e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 42 6e-04
01_06_0662 + 30987187-30987277,30987825-30990214 40 0.002
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 38 0.006
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 33 0.028
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 36 0.031
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 31 0.67
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 31 0.89
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 31 1.2
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 25 1.4
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195... 30 2.0
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 30 2.0
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 29 3.6
08_02_0869 - 22031889-22032017,22032114-22032204,22032289-220323... 29 3.6
01_01_0016 - 88825-90411 29 3.6
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 29 4.7
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 29 4.7
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 29 4.7
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 6.2
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 8.3
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 8.3
03_04_0206 - 18493178-18495310 28 8.3
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 274 bits (672), Expect = 4e-74
Identities = 130/149 (87%), Positives = 137/149 (91%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 415
DKLKAE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 416 GEFEAGISKNGQTREHALLAFTLGVKQLI 502
G FEAGISK+GQTREHALLAFTLGVKQ+I
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149
Score = 94.7 bits (225), Expect = 6e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 511 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 690
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 691 G 693
G
Sbjct: 213 G 213
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 274 bits (672), Expect = 4e-74
Identities = 130/149 (87%), Positives = 137/149 (91%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 415
DKLKAE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 416 GEFEAGISKNGQTREHALLAFTLGVKQLI 502
G FEAGISK+GQTREHALLAFTLGVKQ+I
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149
Score = 94.7 bits (225), Expect = 6e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 511 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 690
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 691 G 693
G
Sbjct: 213 G 213
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 274 bits (672), Expect = 4e-74
Identities = 130/149 (87%), Positives = 137/149 (91%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 415
DKLKAE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 416 GEFEAGISKNGQTREHALLAFTLGVKQLI 502
G FEAGISK+GQTREHALLAFTLGVKQ+I
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149
Score = 94.7 bits (225), Expect = 6e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 511 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 690
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 691 G 693
G
Sbjct: 213 G 213
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 274 bits (672), Expect = 4e-74
Identities = 130/149 (87%), Positives = 137/149 (91%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 236 DKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 415
DKLKAE GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 416 GEFEAGISKNGQTREHALLAFTLGVKQLI 502
G FEAGISK+GQTREHALLAFTLGVKQ+I
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMI 149
Score = 94.7 bits (225), Expect = 6e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 511 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 690
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 691 G 693
G
Sbjct: 213 G 213
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 161 bits (390), Expect = 6e-40
Identities = 76/154 (49%), Positives = 106/154 (68%), Gaps = 5/154 (3%)
Frame = +2
Query: 71 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 250
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 251 ELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 430
E G+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEA
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEA 365
Query: 431 GISKN-----GQTREHALLAFTLGVKQLIVG*TK 517
G+ GQT+EHA L + GV+QLIV K
Sbjct: 366 GMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNK 399
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PS--TKM 678
+NKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+++ PS
Sbjct: 397 VNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLT 454
Query: 679 PWFKGW 696
W++G+
Sbjct: 455 SWYQGF 460
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 161 bits (390), Expect = 6e-40
Identities = 76/154 (49%), Positives = 106/154 (68%), Gaps = 5/154 (3%)
Frame = +2
Query: 71 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 250
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 251 ELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 430
E G+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEA
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEA 365
Query: 431 GISKN-----GQTREHALLAFTLGVKQLIVG*TK 517
G+ GQT+EHA L + GV+QLIV K
Sbjct: 366 GMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNK 399
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE-PS--TKM 678
+NKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+++ PS
Sbjct: 397 VNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVRLT 454
Query: 679 PWFKGW 696
W++G+
Sbjct: 455 SWYQGF 460
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 132 bits (320), Expect = 2e-31
Identities = 65/138 (47%), Positives = 92/138 (66%), Gaps = 4/138 (2%)
Frame = +2
Query: 104 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELSVGITIDIA 283
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + E G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 284 LWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 451
FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G K GQ
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQ 123
Query: 452 TREHALLAFTLGVKQLIV 505
TREH LLA TLGV +LIV
Sbjct: 124 TREHVLLAKTLGVAKLIV 141
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWHGDNM 657
INKMD +S+ R++EI+ ++ +++ GYN V F+PISG G NM
Sbjct: 143 INKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLGSNM 193
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 110 bits (265), Expect = 9e-25
Identities = 49/104 (47%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Frame = +2
Query: 200 MGKGSFKYAWVLDKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 379
+GKGSF YAW +D+ E GIT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQ 335
Query: 380 ADCAVLIVAAGTGEFEAGISKN--GQTREHALLAFTLGVKQLIV 505
+D A+L++ A G FEAG+ N GQT+EH+ L + GV LIV
Sbjct: 336 SDAAILVIDASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIV 379
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPS--TKM- 678
+NKMDS E YS+ RF IK ++ ++++ GY +AVA+VPIS +N++ + T++
Sbjct: 381 VNKMDSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENLMTTASDTRLS 438
Query: 679 PWFKG 693
W+ G
Sbjct: 439 SWYDG 443
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 95.9 bits (228), Expect = 3e-20
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +2
Query: 263 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 442
G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G +
Sbjct: 16 GKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 75
Query: 443 NGQTREHALLAFTLGVKQLIV 505
GQTREH LLA TLGV +L+V
Sbjct: 76 GGQTREHVLLAKTLGVSKLVV 96
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWHGDNMLEPSTK--M 678
INKMD + +S+ R++EI+ ++ ++K GYN V F+PISG G NM K
Sbjct: 98 INKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSNC 157
Query: 679 PWFKG 693
W+ G
Sbjct: 158 SWWSG 162
>02_04_0462 + 23131433-23132836
Length = 467
Score = 86.2 bits (204), Expect = 2e-17
Identities = 52/151 (34%), Positives = 78/151 (51%)
Frame = +2
Query: 53 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 232
K + K H+NI IGHVD GK+T T L + +K+++
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDE--------------- 107
Query: 233 LDKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 412
+D E + GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 167
Query: 413 TGEFEAGISKNGQTREHALLAFTLGVKQLIV 505
G QT+EH LLA +GV +++V
Sbjct: 168 DGPMP-------QTKEHILLAKQVGVPKIVV 191
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 84.2 bits (199), Expect = 9e-17
Identities = 54/147 (36%), Positives = 75/147 (51%)
Frame = +2
Query: 62 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 241
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEAGKAKAVAFDEIDK 107
Query: 242 LKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 421
E + GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+A G
Sbjct: 108 APEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGP 167
Query: 422 FEAGISKNGQTREHALLAFTLGVKQLI 502
QT+EH LLA +GV L+
Sbjct: 168 MP-------QTKEHILLARQVGVPSLV 187
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 52.8 bits (121), Expect = 3e-07
Identities = 45/151 (29%), Positives = 66/151 (43%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELS 259
NI + H+DSGK+T T ++Y G I E E ++ G G+ +D + E
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 260 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 439
GITI A + Y V IID PGH DF + D A+L++ + G I+
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 179
Query: 440 KNGQTREHALLAFTLGVKQLIVG*TKWIPLN 532
+ Q R + + K +G W LN
Sbjct: 180 VDRQMRRYEIPRVAFINKLDRMGADPWKVLN 210
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Frame = +2
Query: 29 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQ 196
+F + + ++ +K +I N+ VI HVD GKST T L+ G I + + + A
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRAD 62
Query: 197 EMGKG-SFKYAWVLDKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGT 373
E +G + K + L E+S ++ + + + ++Y + +ID+PGH DF +
Sbjct: 63 EAERGITIKSTGI--SLFYEMS-DESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAAL 119
Query: 374 SQADCAVLIV 403
D A+++V
Sbjct: 120 RITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Frame = +2
Query: 29 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQ 196
+F + + ++ +K +I N+ VI HVD GKST T L+ G I + + + A
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRAD 62
Query: 197 EMGKG-SFKYAWVLDKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGT 373
E +G + K + L E+S ++ + + + ++Y + +ID+PGH DF +
Sbjct: 63 EAERGITIKSTGI--SLFYEMS-DESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAAL 119
Query: 374 SQADCAVLIV 403
D A+++V
Sbjct: 120 RITDGALVVV 129
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 44.4 bits (100), Expect = 9e-05
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELS 259
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 260 VGITI---DIALWKF--ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
IT+ IAL + + + V +ID+PGH DF + AD A+++V A G
Sbjct: 66 RAITMKSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/113 (27%), Positives = 49/113 (43%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELS 259
N ++ HVD GK+T HL+ CG + G ++ +D L E
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG----------DGLVHPRLAGRLRF---MDYLDEEQR 58
Query: 260 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
IT+ A + V +ID+PGH DF + + +D A+++V A G
Sbjct: 59 RAITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 223
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKS 72
Query: 224 AWVLDKLKAELSVGITIDIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCA 391
+ L E++ D AL FE + Y + +ID+PGH DF + D A
Sbjct: 73 TGI--SLYYEMT-----DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGA 125
Query: 392 VLIV 403
+++V
Sbjct: 126 LVVV 129
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/110 (27%), Positives = 55/110 (50%)
Frame = +2
Query: 74 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 253
HI+ V++ H+D+GK+TTT ++Y G K I +F+ +G+ W+ + +
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQ-------EGTVTMDWMEQEQERG 154
Query: 254 LSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 403
+++ A W +K+ + IID PGH DF + D A++ +
Sbjct: 155 ITITSPPTTAFW----NKHRINIIDTPGHVDFTLEVERALRVLDGAIMSI 200
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/113 (27%), Positives = 46/113 (40%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELS 259
N+ VI HVD GK+T L+ +CG + +D + E
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGA-------------------DIPHERAMDSISLERE 106
Query: 260 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
GITI + + + ++D PGH DF + + AVL+V AG G
Sbjct: 107 RGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 41.5 bits (93), Expect = 6e-04
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELS 259
N +I H+D GKST L+ G + KR EM K F LD + E
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 260 VGITIDIALWKFE----TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
GITI + + Y + +ID PGH DF + + + A+L+V A G
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKY 223
M K+ N+ V+ HVD GKST T L+ G I + + + + E +G + K
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKS 72
Query: 224 AWVLDKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ L E+S ++ + ++Y + +ID+PGH DF + D A+++V
Sbjct: 73 TGI--SLYYEMS-DESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELS 259
N+ ++GH+ GK+ L+ + +D F+ E + + F V D+ + +S
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVDT-----FDSEGERHVR--FTDTRV-DEQERRVS 201
Query: 260 V-GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ + + + L Y I+D PGH +F M AD AVL+V A G
Sbjct: 202 IKAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 33.5 bits (73), Expect(2) = 0.028
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 203 GKGSFKYAWVLDKLKAELSVGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQ 379
GK S + + A+ + GIT I + E S +T +D PGH F G +
Sbjct: 209 GKTSLLDSLRQTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAV 268
Query: 380 ADCAVLIVAAGTG 418
D VL+VAA G
Sbjct: 269 TDIVVLVVAADDG 281
Score = 21.4 bits (43), Expect(2) = 0.028
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +2
Query: 83 IVVIGHVDSGKST 121
+ ++GHVD GK++
Sbjct: 200 VTIMGHVDHGKTS 212
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 35.9 bits (79), Expect = 0.031
Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 15/128 (11%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELS 259
N +I HVD GKST L+ G I K G G +Y LDKL+ E
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 260 VGITIDI---------------ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAV 394
GIT+ A + + Y + +ID PGH DF + + A+
Sbjct: 103 RGITVKAQTATMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGAL 162
Query: 395 LIVAAGTG 418
L+V A G
Sbjct: 163 LVVDAAQG 170
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 31.5 bits (68), Expect = 0.67
Identities = 26/105 (24%), Positives = 46/105 (43%)
Frame = +2
Query: 89 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELSVGI 268
++GHVD+GK+ + +C + Q++G F + ++ K EL G
Sbjct: 427 ILGHVDTGKTKLLDCI--RCTNVQGGEAGGI---TQQIGATFFPIENIRERTK-ELKAGA 480
Query: 269 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ + + +ID PGH+ F G+S D A+L+V
Sbjct: 481 ALHVPGF---------LVIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 311 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 409
+V+ +D PGH + M+ G + D A+L++AA
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +2
Query: 89 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAELSV 262
++GHVD+GK+ + C I + +++ E Q++G F + ++ K EL
Sbjct: 704 ILGHVDTGKTK-----LLDC--IRRTNVQEGEAGGITQQIGATYFPTENIRERTK-ELKA 755
Query: 263 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 403
T+ + + +ID PGH F G+S D A+L+V
Sbjct: 756 DATLKVP---------GLLVIDTPGHESFSNLRSRGSSLCDIAILVV 793
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +2
Query: 239 KLKAELSVGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 406
K+ A + GIT I ++ + + + +D PGH F G D +++V+
Sbjct: 451 KVVASEAGGITQGIGAYQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVVS 510
Query: 407 AGTG 418
A G
Sbjct: 511 ADDG 514
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 83 IVVIGHVDSGKSTTTGHL 136
+ ++GHVD GK+T ++
Sbjct: 430 VTIMGHVDHGKTTLLDYI 447
>09_01_0129 -
1954470-1955129,1956285-1956371,1956475-1956663,
1956772-1956900,1957386-1957472,1957572-1958036,
1959844-1959923,1961295-1961358,1961444-1961455
Length = 590
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 633 NGHESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVYPTM 499
NGH +++V++N L Y LL + G ++ SG+ HFVY T+
Sbjct: 379 NGHYGVTTFVISNTLSSTPYLLLIAIIPGAIAYYLSGLQRQIEHFVYFTL 428
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +1
Query: 517 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 675
M STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 594 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 695
DW+ C AHF RRQ +G F A G+
Sbjct: 697 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 730
>08_02_0869 -
22031889-22032017,22032114-22032204,22032289-22032389,
22033262-22033303,22033393-22033491,22033616-22033753,
22033853-22034428,22034897-22035070,22035155-22035290,
22035694-22035725,22036873-22037125,22037216-22037304,
22037771-22037824,22038801-22038992,22039065-22039229
Length = 756
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 594 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 695
DW+ C AHF RRQ +G F A G+
Sbjct: 689 DWVNCGLCGEWAHFGCDRRQGLGTFKDYAKTDGL 722
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 505 YDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 386
YD F + +G+L L+V+ F+ TGT + D+H A
Sbjct: 241 YDAAF--RDHARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 570 LLDFLKSGLTVWWFSGIHFVYPTMSCL 490
+L+ GL VW GIHFVY S L
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVYRGSSYL 260
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 695 HPLNQGILVEGSNMLSPCHPEMGTKATAAG 606
HP +L G N L+ C+P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +2
Query: 80 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAELS 259
NI ++ HVD GK+T ++ + + + + QE ++D E
Sbjct: 121 NIAIVAHVDHGKTTLVDSMLRQA------KVFRDNQVVQER---------IMDSNDLERE 165
Query: 260 VGITIDIALWKFETSKYYVTIIDAPGHRDF 349
GITI + IID PGH DF
Sbjct: 166 RGITILSKNTSITYKGTKINIIDTPGHSDF 195
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 320 IIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ID PGH F G S D AV++V
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 68 KTHINIVVIGHVDSG 112
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 436 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 302
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
>03_04_0206 - 18493178-18495310
Length = 710
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEV 576
+NK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,917,590
Number of Sequences: 37544
Number of extensions: 429062
Number of successful extensions: 1235
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -