Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20086
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for ... 71 4e-12
J04205-1|AAA51885.1| 408|Homo sapiens La protein protein. 71 4e-12
BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antige... 71 4e-12
BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antige... 71 4e-12
BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antige... 71 4e-12
AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein. 71 4e-12
M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human ribonucle... 61 4e-09
DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antige... 57 7e-08
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 43 9e-04
BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein do... 38 0.033
BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein do... 38 0.033
BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein do... 38 0.033
AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens ... 38 0.033
AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein. 38 0.033
AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein. 38 0.033
M35261-1|AAA36652.1| 27|Homo sapiens protein ( Human SS-B/La p... 35 0.31
X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein. 33 0.93
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 31 3.8
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 31 3.8
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 31 3.8
BC128263-1|AAI28264.1| 874|Homo sapiens terminal uridylyl trans... 30 6.6
BC110910-1|AAI10911.1| 874|Homo sapiens terminal uridylyl trans... 30 6.6
AK074061-1|BAB84887.1| 572|Homo sapiens FLJ00132 protein protein. 30 6.6
AF399708-1|AAO38813.1| 2145|Homo sapiens TRALPUSH protein. 30 8.7
AB046855-1|BAB13461.1| 1435|Homo sapiens KIAA1635 protein protein. 30 8.7
>X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for
ribonucleoprotein SS-B/La. ).
Length = 408
Score = 70.9 bits (166), Expect = 4e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +1
Query: 343 PLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGF 513
PLEI+ KFNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ + +
Sbjct: 48 PLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 56.8 bits (131), Expect = 7e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIKLDDGWV 343
Q+EYYFGD NL RDKFL+EQIKLD+GWV
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWV 47
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 513 RKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 632
+ ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR
Sbjct: 105 KNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRR 144
>J04205-1|AAA51885.1| 408|Homo sapiens La protein protein.
Length = 408
Score = 70.9 bits (166), Expect = 4e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +1
Query: 343 PLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGF 513
PLEI+ KFNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ + +
Sbjct: 48 PLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 56.8 bits (131), Expect = 7e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIKLDDGWV 343
Q+EYYFGD NL RDKFL+EQIKLD+GWV
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWV 47
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 513 RKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 632
+ ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR
Sbjct: 105 KNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRR 144
>BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 70.9 bits (166), Expect = 4e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +1
Query: 343 PLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGF 513
PLEI+ KFNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ + +
Sbjct: 48 PLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 56.8 bits (131), Expect = 7e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIKLDDGWV 343
Q+EYYFGD NL RDKFL+EQIKLD+GWV
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWV 47
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 513 RKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 632
+ ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR
Sbjct: 105 KNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRR 144
>BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 70.9 bits (166), Expect = 4e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +1
Query: 343 PLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGF 513
PLEI+ KFNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ + +
Sbjct: 48 PLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 56.8 bits (131), Expect = 7e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIKLDDGWV 343
Q+EYYFGD NL RDKFL+EQIKLD+GWV
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWV 47
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 513 RKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 632
+ ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR
Sbjct: 105 KNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRR 144
>BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 70.9 bits (166), Expect = 4e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +1
Query: 343 PLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGF 513
PLEI+ KFNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ + +
Sbjct: 48 PLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 56.8 bits (131), Expect = 7e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIKLDDGWV 343
Q+EYYFGD NL RDKFL+EQIKLD+GWV
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWV 47
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 513 RKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 632
+ ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR
Sbjct: 105 KNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRR 144
>AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein.
Length = 408
Score = 70.9 bits (166), Expect = 4e-12
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +1
Query: 343 PLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGF 513
PLEI+ KFNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ + +
Sbjct: 48 PLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY 104
Score = 56.8 bits (131), Expect = 7e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIKLDDGWV 343
Q+EYYFGD NL RDKFL+EQIKLD+GWV
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWV 47
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 513 RKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 632
+ ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR
Sbjct: 105 KNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRR 144
>M20328-1|AAA36577.1| 355|Homo sapiens protein ( Human
ribonucleoprotein (La) mRNA, 3' end. ).
Length = 355
Score = 60.9 bits (141), Expect = 4e-09
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +1
Query: 361 KFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGF 513
+FNRL +LT D +VI AL+KS + L+E+SED K+RR+P +PLPE+ + +
Sbjct: 1 EFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEVTDEY 51
Score = 41.1 bits (92), Expect = 0.004
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 513 RKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 632
+ ++ NRS+Y KGF DA+LDD+ + + +V N+ MRR
Sbjct: 52 KNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRR 91
>DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antigen B
protein.
Length = 48
Score = 56.8 bits (131), Expect = 7e-08
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIKLDDGWV 343
Q+EYYFGD NL RDKFL+EQIKLD+GWV
Sbjct: 20 QIEYYFGDFNLPRDKFLKEQIKLDEGWV 47
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 43.2 bits (97), Expect = 9e-04
Identities = 18/30 (60%), Positives = 26/30 (86%), Gaps = 1/30 (3%)
Frame = +2
Query: 257 RQVEYYFGDVNLHRDKFLQEQI-KLDDGWV 343
+QV+++FGD NLH+D+FL+EQI K DG+V
Sbjct: 40 KQVDFWFGDANLHKDRFLREQIEKSRDGYV 69
Score = 35.9 bits (79), Expect = 0.13
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Frame = +1
Query: 184 KPMDKRRTRKPK-IQKTKPN---WILRFSASRILFW*CKST---SR*ISARTNKIR*RMG 342
K M++ T K K ++K K + +L A ++ FW + R + + K R
Sbjct: 10 KVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYV 69
Query: 343 PLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPE 498
+ +L FN++ KLT D +IA AL +S ++E+ + ++RR ++PL E
Sbjct: 70 DISLLVSFNKMKKLTTDGKLIARALR--SSAVVELDLEGTRIRR--KKPLGE 117
>BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.033
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 346 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 492
+++LT F ++ LT D A+AL S +LE++ED++KVRR PL
Sbjct: 129 VKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELNEDHRKVRRTTPVPL 175
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIK 325
Q+E+YF D NL +D FL + ++
Sbjct: 99 QIEFYFSDENLEKDAFLLKHVR 120
>BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.033
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 346 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 492
+++LT F ++ LT D A+AL S +LE++ED++KVRR PL
Sbjct: 129 VKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELNEDHRKVRRTTPVPL 175
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIK 325
Q+E+YF D NL +D FL + ++
Sbjct: 99 QIEFYFSDENLEKDAFLLKHVR 120
>BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.033
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 346 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 492
+++LT F ++ LT D A+AL S +LE++ED++KVRR PL
Sbjct: 129 VKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELNEDHRKVRRTTPVPL 175
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIK 325
Q+E+YF D NL +D FL + ++
Sbjct: 99 QIEFYFSDENLEKDAFLLKHVR 120
>AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ11196 fis, clone PLACE1007688, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 491
Score = 37.9 bits (84), Expect = 0.033
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 346 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 492
+++LT F ++ LT D A+AL S +LE++ED++KVRR PL
Sbjct: 129 VKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELNEDHRKVRRTTPVPL 175
>AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.033
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 346 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 492
+++LT F ++ LT D A+AL S +LE++ED++KVRR PL
Sbjct: 129 VKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELNEDHRKVRRTTPVPL 175
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIK 325
Q+E+YF D NL +D FL + ++
Sbjct: 99 QIEFYFSDENLEKDAFLLKHVR 120
>AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.033
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 346 LEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 492
+++LT F ++ LT D A+AL S +LE++ED++KVRR PL
Sbjct: 129 VKLLTSFKKVKHLTRDWRTTAHALKYSV--VLELNEDHRKVRRTTPVPL 175
Score = 29.9 bits (64), Expect = 8.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 260 QVEYYFGDVNLHRDKFLQEQIK 325
Q+E+YF D NL +D FL + ++
Sbjct: 99 QIEFYFSDENLEKDAFLLKHVR 120
>M35261-1|AAA36652.1| 27|Homo sapiens protein ( Human SS-B/La
protein mRNA, partial cds. ).
Length = 27
Score = 34.7 bits (76), Expect = 0.31
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 442 EVSEDNKKVRRNPEQPLPEMNEGF 513
E+SED K+RR+P +PLPE+ + +
Sbjct: 1 EISEDKTKIRRSPSKPLPEVTDEY 24
>X14684-1|CAA32815.1| 296|Homo sapiens La 4.1 protein protein.
Length = 296
Score = 33.1 bits (72), Expect = 0.93
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 537 IYAKGFAKDASLDDLLNYFKQFQEVENVIMRR 632
+Y KGF DA+LDD+ + + +V N+ MRR
Sbjct: 1 LYIKGFPTDATLDDIKEWLEDKGQVLNIQMRR 32
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 257 RQVEYYFGDVNLHRDKFLQEQIKLD 331
RQ+EYYF NL RD FL+ ++ D
Sbjct: 332 RQIEYYFSVDNLERDFFLRRKMDAD 356
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 257 RQVEYYFGDVNLHRDKFLQEQIKLD 331
RQ+EYYF NL RD FL+ ++ D
Sbjct: 409 RQIEYYFSVDNLERDFFLRRKMDAD 433
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 31.1 bits (67), Expect = 3.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 257 RQVEYYFGDVNLHRDKFLQEQIKLD 331
RQ+EYYF NL RD FL+ ++ D
Sbjct: 409 RQIEYYFSVDNLERDFFLRRKMDAD 433
>BC128263-1|AAI28264.1| 874|Homo sapiens terminal uridylyl
transferase 1, U6 snRNA-specific protein.
Length = 874
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 504 RGLRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIM 626
R RK RS++ GF +D L YF F V +V+M
Sbjct: 47 RAARKAQGLRSVFVSGFPRDVDSAQLSEYFLAFGPVASVVM 87
>BC110910-1|AAI10911.1| 874|Homo sapiens terminal uridylyl
transferase 1, U6 snRNA-specific protein.
Length = 874
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 504 RGLRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIM 626
R RK RS++ GF +D L YF F V +V+M
Sbjct: 47 RAARKAQGLRSVFVSGFPRDVDSAQLSEYFLAFGPVASVVM 87
>AK074061-1|BAB84887.1| 572|Homo sapiens FLJ00132 protein protein.
Length = 572
Score = 30.3 bits (65), Expect = 6.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 504 RGLRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIM 626
R RK RS++ GF +D L YF F V +V+M
Sbjct: 62 RAARKAQGLRSVFVSGFPRDVDSAQLSEYFLAFGPVASVVM 102
>AF399708-1|AAO38813.1| 2145|Homo sapiens TRALPUSH protein.
Length = 2145
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 367 NRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGFVK 519
++L K+T+D I LNK ++ V ++ +K R+N ++ P + F K
Sbjct: 742 HQLKKITKD---ILKILNKKSTTETGVGDEGQKARKNKQETFPTLETVFTK 789
>AB046855-1|BAB13461.1| 1435|Homo sapiens KIAA1635 protein protein.
Length = 1435
Score = 29.9 bits (64), Expect = 8.7
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 367 NRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEGFVK 519
++L K+T+D I LNK ++ V ++ +K R+N ++ P + F K
Sbjct: 32 HQLKKITKD---ILKILNKKSTTETGVGDEGQKARKNKQETFPTLETVFTK 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,159,792
Number of Sequences: 237096
Number of extensions: 1648512
Number of successful extensions: 5324
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5285
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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