Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20084
(662 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 2.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 2.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 2.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 2.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 6.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 6.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 6.0
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 7.9
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 IISAPSNNRKSKTILLNGWPLYYESN-LHNLRPNIHRYGRYVSLPPYSIGFWVIRKHQ 521
IIS+ SNN N PLYY N + + + Y + PP +G +V + Q
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSMQEQ 138
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 IISAPSNNRKSKTILLNGWPLYYESN-LHNLRPNIHRYGRYVSLPPYSIGFWVIRKHQ 521
IIS+ SNN N PLYY N + + + Y + PP +G +V + Q
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSMQEQ 138
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 IISAPSNNRKSKTILLNGWPLYYESN-LHNLRPNIHRYGRYVSLPPYSIGFWVIRKHQ 521
IIS+ SNN N PLYY N + + + Y + PP +G +V + Q
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSMQEQ 138
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 IISAPSNNRKSKTILLNGWPLYYESN-LHNLRPNIHRYGRYVSLPPYSIGFWVIRKHQ 521
IIS+ SNN N PLYY N + + + Y + PP +G +V + Q
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSMQEQ 138
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 IISAPSNNRKSKTILLNGWPLYYESN-LHNLRPNIHRYGRYVSLPPYSIGFWVIRKHQ 521
IIS+ SNN N PLYY N + + + Y + PP +G +V + Q
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQ 371
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 IISAPSNNRKSKTILLNGWPLYYESN-LHNLRPNIHRYGRYVSLPPYSIGFWVIRKHQ 521
IIS+ SNN N PLYY N + + + Y + PP +G +V + Q
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQ 371
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 IISAPSNNRKSKTILLNGWPLYYESN-LHNLRPNIHRYGRYVSLPPYSIGFWVIRKHQ 521
IIS+ SNN N PLYY N + + + Y + PP +G +V + Q
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQ 371
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 IISAPSNNRKSKTILLNGWPLYYESN-LHNLRPNIHRYGRYVSLPPYSIGFWVIRKHQ 521
IIS+ SNN N PLYY N + + + Y + PP +G +V + Q
Sbjct: 303 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVPVPFPVYYGNFPPRPMGPFVSIQEQ 360
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 595 LGGIPKYT*VTLNFLSDSIW 654
L G P + V +N L DS W
Sbjct: 303 LQGFPSNSWVAINELQDSFW 322
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 595 LGGIPKYT*VTLNFLSDSIW 654
L G P + V +N L DS W
Sbjct: 271 LQGFPSNSWVAINELQDSFW 290
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 69 LSNDGGYIVFCR*T*FINPKLV 4
L+ND GY+V+ F P LV
Sbjct: 241 LTNDAGYVVYSALGSFYIPMLV 262
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 461 WTLCFTTSIFYWILGNKKTSI 523
WT + S++YWI N I
Sbjct: 273 WTPYYVMSLWYWIDRNSAYKI 293
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,897
Number of Sequences: 438
Number of extensions: 4238
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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