Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20081
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   0.87 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.6  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   8.1  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 67   FGAYGEIESINVKTDPNTGRSRGFAF 144
            + A G +E++NV+TDP     R F +
Sbjct: 2121 YNADGMVETMNVRTDPTHTFQRNFTY 2146


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 67   FGAYGEIESINVKTDPNTGRSRGFAF 144
            + A   +E++NV+TDP     R F +
Sbjct: 2111 YNADSMVETMNVRTDPTHTFQRNFTY 2136


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 28  LSWETTDKELRDHFGA 75
           + WE+  KE+  HFG+
Sbjct: 132 IPWESRIKEIESHFGS 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,380
Number of Sequences: 2352
Number of extensions: 10418
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)