Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20079
(698 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog... 92 1e-17
UniRef50_O60739 Cluster: Eukaryotic translation initiation facto... 81 3e-14
UniRef50_P41567 Cluster: Eukaryotic translation initiation facto... 79 1e-13
UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor... 69 1e-10
UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog... 60 7e-08
UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza sat... 54 3e-06
UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|R... 54 3e-06
UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2... 52 1e-05
UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation facto... 51 3e-05
UniRef50_Q00T99 Cluster: Translation initiation factor SUI1, put... 50 5e-05
UniRef50_Q6MVC9 Cluster: Probable translation initiation factor ... 46 9e-04
UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15; ... 46 0.001
UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia scl... 42 0.011
UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations... 42 0.015
UniRef50_Q86AU4 Cluster: Similar to translation initiation facto... 41 0.025
UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;... 39 0.14
UniRef50_UPI000150A7AF Cluster: Translation initiation factor SU... 38 0.31
UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating... 37 0.41
UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, wh... 35 1.7
UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n... 35 2.2
UniRef50_Q4TGS9 Cluster: Chromosome undetermined SCAF3502, whole... 34 3.9
UniRef50_A7T1N0 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.1
UniRef50_Q0PQL7 Cluster: Phenylalanyl-tRNA synthetase beta subun... 33 6.7
UniRef50_Q9LNV2 Cluster: F22G5.33; n=2; Arabidopsis thaliana|Rep... 33 8.9
>UniRef50_Q9VZS3 Cluster: Protein translation factor SUI1 homolog;
n=11; Bilateria|Rep: Protein translation factor SUI1
homolog - Drosophila melanogaster (Fruit fly)
Length = 110
Score = 92.3 bits (219), Expect = 1e-17
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 68 GTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = +2
Query: 140 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRR 256
MSIQNLNT DPFADAIK ++DD+QDGLVH+RIQQRNGR+
Sbjct: 1 MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRK 39
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQGLS+EYDLKKIVR+CKKEFAC
Sbjct: 40 TLTTVQGLSAEYDLKKIVRSCKKEFAC 66
>UniRef50_O60739 Cluster: Eukaryotic translation initiation factor
1b; n=44; Fungi/Metazoa group|Rep: Eukaryotic
translation initiation factor 1b - Homo sapiens (Human)
Length = 113
Score = 80.6 bits (190), Expect = 3e-14
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL +FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>UniRef50_P41567 Cluster: Eukaryotic translation initiation factor
1; n=53; Eukaryota|Rep: Eukaryotic translation
initiation factor 1 - Homo sapiens (Human)
Length = 113
Score = 79.0 bits (186), Expect = 1e-13
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>UniRef50_UPI0000DD7914 Cluster: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1; n=1; Homo
sapiens|Rep: PREDICTED: similar to suppressor of
initiator codon mutations, related sequence 1 - Homo
sapiens
Length = 288
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+Q QGDQ NICQ+L + GL K +QLKVH F
Sbjct: 246 GTVIEHPEYGEVIQPQGDQCNNICQFLVELGLAKDDQLKVHVF 288
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/54 (42%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +2
Query: 101 SVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+VS ++++ ++ + +IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 166 AVSTEEKE-SYCKFAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 218
Score = 37.5 bits (83), Expect = 0.31
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A K FAC
Sbjct: 219 TLTTVQGIADDYDKKKLVKAF-KNFAC 244
>UniRef50_Q94JV4 Cluster: Protein translation factor SUI1 homolog 2;
n=42; Eukaryota|Rep: Protein translation factor SUI1
homolog 2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 59.7 bits (138), Expect = 7e-08
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTVV+ E G+V+QLQGDQR+N+ +L ++GLVK + +K+HGF
Sbjct: 71 GTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 140 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRR 256
+ +Q FDPFADA VH+R+QQRNGR+
Sbjct: 4 LEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRK 42
Score = 37.9 bits (84), Expect = 0.24
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
+LTTVQGL EY KI++ KKEF C
Sbjct: 43 SLTTVQGLKKEYSYSKILKDLKKEFCC 69
>UniRef50_Q7XN79 Cluster: OSJNBa0089N06.3 protein; n=6; Oryza
sativa|Rep: OSJNBa0089N06.3 protein - Oryza sativa
(Rice)
Length = 580
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
G VVE E G+++QLQGD R ++ +L K+G+V+ + +KVHGF
Sbjct: 538 GNVVEDKELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 580
Score = 35.9 bits (79), Expect = 0.96
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG+ EY+ K++R K+E C
Sbjct: 510 TLTTVQGIGGEYNYAKVLRDLKRELCC 536
>UniRef50_Q00RG6 Cluster: H0303G06.6 protein; n=2; Oryza sativa|Rep:
H0303G06.6 protein - Oryza sativa (Rice)
Length = 241
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
G VVE E G+++QLQGD R ++ +L K+G+V+ + +KVHGF
Sbjct: 199 GNVVEDKELGKIIQLQGDHRNSVSDFLAKAGMVRKDNIKVHGF 241
Score = 35.9 bits (79), Expect = 0.96
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG+ EY+ K++R K+E C
Sbjct: 171 TLTTVQGIGGEYNYAKVLRDLKRELCC 197
>UniRef50_Q5CLR9 Cluster: Translation initiation factor SUI1; n=2;
Cryptosporidium|Rep: Translation initiation factor SUI1
- Cryptosporidium hominis
Length = 112
Score = 52.0 bits (119), Expect = 1e-05
Identities = 17/42 (40%), Positives = 31/42 (73%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 464
GT+++ PE+G +LQ+QGD R N+ ++L +V +++K+HG
Sbjct: 70 GTIIDDPEHGPILQIQGDHRHNVARFLVGENIVNSDEIKIHG 111
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/27 (62%), Positives = 25/27 (92%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
+LTTVQGLS+E+DLK++++A KK F+C
Sbjct: 42 SLTTVQGLSAEFDLKRLLKAFKKNFSC 68
>UniRef50_Q38LF1 Cluster: Eukaryotic translation initiation factor
1; n=9; Apicomplexa|Rep: Eukaryotic translation
initiation factor 1 - Toxoplasma gondii
Length = 163
Score = 50.8 bits (116), Expect = 3e-05
Identities = 18/42 (42%), Positives = 31/42 (73%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 464
GTV+E PE+G ++QLQGDQR + ++L + + +Q+++HG
Sbjct: 121 GTVIEDPEHGSIIQLQGDQRHAVKEFLEREAICSVDQIRIHG 162
Score = 40.7 bits (91), Expect = 0.034
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
++TTVQGL DLKK+VRA KK+F+C
Sbjct: 93 SVTTVQGLDKSLDLKKMVRALKKQFSC 119
>UniRef50_Q00T99 Cluster: Translation initiation factor SUI1,
putative; n=1; Ostreococcus tauri|Rep: Translation
initiation factor SUI1, putative - Ostreococcus tauri
Length = 129
Score = 50.0 bits (114), Expect = 5e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 464
G +VE E+G+++QLQGDQR+NI Q+L + K +KVHG
Sbjct: 86 GCIVEDSEHGDIVQLQGDQRKNIAQFLVDERISKKALIKVHG 127
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
+LTTVQGL+ + +LK +V+ CKK+F C
Sbjct: 58 SLTTVQGLNPKINLKLVVKECKKKFNC 84
>UniRef50_Q6MVC9 Cluster: Probable translation initiation factor
SUI1; n=2; Neurospora crassa|Rep: Probable translation
initiation factor SUI1 - Neurospora crassa
Length = 117
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 140 MSIQNLNTFDPFADAIK--SSEDDVQDGLVHVRIQQRNGRRR*LRCKAFPR 286
MSI+NL T+DPFA+A + S + +H+RIQQRNGR+ + P+
Sbjct: 1 MSIENLKTYDPFAEADEEDSGQTKQTQEYIHIRIQQRNGRKTLTTVQGIPK 51
Score = 41.9 bits (94), Expect = 0.015
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG+ ++D KKI++ KKEFAC
Sbjct: 42 TLTTVQGIPKKFDAKKILKVVKKEFAC 68
Score = 37.5 bits (83), Expect = 0.31
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Frame = +3
Query: 339 GTVV--EHPEYGEVLQLQGDQRENICQWLTK--SGL-VKPEQLKVHGF 467
GT++ E + G+V+QLQGDQR I +LT GL + + +KVHGF
Sbjct: 70 GTIIGDEDSKMGDVIQLQGDQRAKIKDFLTNKDEGLGLDAKTIKVHGF 117
>UniRef50_A6SQI8 Cluster: Translation initiation factor 3; n=15;
Pezizomycotina|Rep: Translation initiation factor 3 -
Botryotinia fuckeliana B05.10
Length = 169
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 146 IQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRRR*LRCKAFPR 286
I+NL FDPFA+A + D +H+RIQQRNGR+ + P+
Sbjct: 60 IENLKVFDPFAEADEEPGDQKAAEYIHIRIQQRNGRKTLTTVQGLPK 106
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/45 (48%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLT-KSGL-VKPEQLKVHGF 467
GT+V G+V+QLQGDQR+++ ++LT K GL ++ + +KVHGF
Sbjct: 125 GTIVNDVIMGDVIQLQGDQRKDVQEFLTGKDGLELEAKTIKVHGF 169
Score = 40.7 bits (91), Expect = 0.034
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQGL ++D KKI++ KK+FAC
Sbjct: 97 TLTTVQGLPKKFDQKKILKVIKKKFAC 123
>UniRef50_A7ES43 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 165
Score = 42.3 bits (95), Expect = 0.011
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +1
Query: 178 RCYQKLGGRRSRWFSPRPYPATKRA*TLTTVQGLSSEYDLKKIVRACKKEFAC 336
RC Q+ GGR R + P LTTVQGL +++KK+V+A KK+FAC
Sbjct: 74 RC-QQTGGRPKRNMEGKKKPHM-----LTTVQGLPDRFNMKKVVKAFKKKFAC 120
Score = 39.1 bits (87), Expect = 0.10
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Frame = +3
Query: 342 TVVEHPEYGEVLQLQGDQRENICQWL-TKSGL-VKPEQLKVHG 464
++VE +GEV+Q+QGD R+ I ++L TK GL + E + VHG
Sbjct: 123 SIVEDKVFGEVIQIQGDYRQKIYEFLTTKDGLELDEENVVVHG 165
>UniRef50_Q5KLG3 Cluster: Suppressor of initiator codon mutations,
putative; n=1; Filobasidiella neoformans|Rep: Suppressor
of initiator codon mutations, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 159
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG+ S+Y+ KI++A KKEFAC
Sbjct: 71 TLTTVQGIPSKYNHSKILKAMKKEFAC 97
Score = 35.9 bits (79), Expect = 0.96
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = +3
Query: 363 YGEVLQLQGDQRENICQWLTKSGLVKPEQLK----VHGF 467
+G+VLQLQGDQR Q+L SG+V ++ K VHG+
Sbjct: 121 HGDVLQLQGDQRVAAKQFLIDSGIVAQKEAKDLIVVHGY 159
>UniRef50_Q86AU4 Cluster: Similar to translation initiation factor 3
(EIF3); Sui1p; n=2; Dictyostelium discoideum|Rep:
Similar to translation initiation factor 3 (EIF3); Sui1p
- Dictyostelium discoideum (Slime mold)
Length = 110
Score = 41.1 bits (92), Expect = 0.025
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +3
Query: 315 MQEGVRVQGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
+++ + G +VE G +++LQGD+R+ I +L + + + +K+HGF
Sbjct: 60 LKKSLNCNGNIVEEENLGMIIKLQGDKRKEIALFLIEEKISQKPSIKIHGF 110
Score = 36.3 bits (80), Expect = 0.72
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRRR*LRCKAFPRNMT*RRSCGH 316
SIQNLN+ DPFA+ + D VH+RI QR+GR+ + P + ++ H
Sbjct: 3 SIQNLNSADPFAED-SNLGGDSGISYVHIRIFQRSGRKAVTTVEGLPPKIDLKKILKH 59
>UniRef50_Q4QAL1 Cluster: Translation factor SUI1, putative; n=5;
Trypanosomatidae|Rep: Translation factor SUI1, putative
- Leishmania major
Length = 107
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVH 461
GTV+ P+ G V+QLQG+ ENI Q+L + L++H
Sbjct: 65 GTVISTPDAGTVIQLQGNWSENIKQFLLDEHMATENNLEIH 105
>UniRef50_UPI000150A7AF Cluster: Translation initiation factor SUI1
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Translation initiation factor SUI1 family protein -
Tetrahymena thermophila SB210
Length = 101
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 342 TVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHG 464
T+VE E +V++L GD R I Q+L++ G+ + + +HG
Sbjct: 60 TIVEEDEGKKVIKLNGDHRNQIQQFLSEEGIAAVDNITIHG 100
>UniRef50_Q40537 Cluster: Nicotiana tabacum (clone 12) activating
factor DNA sequence; n=1; Nicotiana tabacum|Rep:
Nicotiana tabacum (clone 12) activating factor DNA
sequence - Nicotiana tabacum (Common tobacco)
Length = 81
Score = 37.1 bits (82), Expect = 0.41
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +2
Query: 140 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRR 256
+ +Q + FDPFA+A S ++ VH+RIQQRNG++
Sbjct: 35 IDVQIPSAFDPFAEAKDSGAPGAKE-YVHIRIQQRNGKK 72
>UniRef50_A0CXT2 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 35.1 bits (77), Expect = 1.7
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 339 GTVVEHPEYGE--VLQLQGDQRENICQWLTKSGLVKPEQLKVHG 464
G + + +YG+ ++L GD R+ I ++L + G+ + +KVHG
Sbjct: 63 GIISKDEDYGDQVTIRLTGDNRQQIAKFLVEEGIALQDNIKVHG 106
Score = 32.7 bits (71), Expect = 8.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
T T + G+ E+DL KI+R KK+F C
Sbjct: 34 TQTIIVGIPDEFDLNKIIRFWKKQFNC 60
>UniRef50_UPI0000498D7F Cluster: Translation initiation factor; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: Translation
initiation factor - Entamoeba histolytica HM-1:IMSS
Length = 110
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 366 GEV-LQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GEV +L GDQR+ + G++ PE +K+HGF
Sbjct: 76 GEVEFKLSGDQRKAASNFFLAEGILLPENIKIHGF 110
>UniRef50_Q4TGS9 Cluster: Chromosome undetermined SCAF3502, whole
genome shotgun sequence; n=3; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3502,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 399
Score = 33.9 bits (74), Expect = 3.9
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = -2
Query: 367 PYSGCSTTVPCTRTPSCMPARSSSGHIPRKGLAP*SASTPVSLLDTDVD*TILNVVLRAF 188
P++ T CTR+ C P + G P + P+SLLD LN VL AF
Sbjct: 222 PWTSSRRTWTCTRSWPCPPCWAGPSPPMAPGAQPGTLQPPMSLLDFQPLACFLNNVLSAF 281
Query: 187 DSIG 176
+ G
Sbjct: 282 NDCG 285
>UniRef50_A7T1N0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 1551
Score = 33.5 bits (73), Expect = 5.1
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 369 EVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF*AALLKHNMSTLNMYYERLRVVIINPI 548
+VL+ QR++ QW G+V+P QL A + M+ LN+ E + I I
Sbjct: 1408 KVLEFVAIQRKDNNQWAIPGGMVEPGQLVTQALKAEFGEEAMAKLNVSQEE-KERIAKQI 1466
Query: 549 KNMYLESTDVYR 584
+ ++ + ++Y+
Sbjct: 1467 ERLFQQGQEIYK 1478
>UniRef50_Q0PQL7 Cluster: Phenylalanyl-tRNA synthetase beta subunit;
n=1; Endoriftia persephone 'Hot96_1+Hot96_2'|Rep:
Phenylalanyl-tRNA synthetase beta subunit - Endoriftia
persephone 'Hot96_1+Hot96_2'
Length = 287
Score = 33.1 bits (72), Expect = 6.7
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = -2
Query: 397 RWSP*SCSTSPYSGCSTTVPCTRTPSCMPARSSSGHIPRKGL-AP*SASTPVSLLDTDVD 221
RW + +P S + C+R S P RSS+ +P + P +AS+ S+
Sbjct: 7 RWPASWAARAPGSAPRPAISCSRALSSAPPRSSARRVPMGCIPTPRTASSAASIPSLQAQ 66
Query: 220 *TILNVVLRAFDSI-GEWVECVEILDGHTIERRVSLFQRNAAILR 89
+ D + GE VE+ D IE R + R+ I R
Sbjct: 67 -AMQRATALLLDIVGGEAGPVVEVSDEEKIEARPQILLRHQRIQR 110
>UniRef50_Q9LNV2 Cluster: F22G5.33; n=2; Arabidopsis thaliana|Rep:
F22G5.33 - Arabidopsis thaliana (Mouse-ear cress)
Length = 753
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 101 SVSLKQRDPTFNRMSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRRR 259
SV + P+F + I+ N F PF+ E+ + L H R +RN RR+
Sbjct: 64 SVFYLRNHPSFKLLHIKTDNWFSPFSQKRSEEEETRKADLKHQRSVRRNARRK 116
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,635,022
Number of Sequences: 1657284
Number of extensions: 13138699
Number of successful extensions: 36194
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 34499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36156
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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