Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20079
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein. 81 5e-15
BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation ... 81 5e-15
AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1... 81 5e-15
AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eI... 81 5e-15
AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein. 81 5e-15
L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein. 79 2e-14
CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein. 79 2e-14
BT006645-1|AAP35291.1| 113|Homo sapiens putative translation in... 79 2e-14
BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation ... 79 2e-14
BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation ... 79 2e-14
AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein. 79 2e-14
AF100737-1|AAD19900.1| 113|Homo sapiens putative translation in... 79 2e-14
AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein. 79 2e-14
AF490966-1|AAO11890.1| 138|Homo sapiens immunoglobulin lambda l... 30 6.9
>CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL +FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation
initiation factor 1B protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL +FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1
homolog protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL +FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 42.7 bits (96), Expect = 0.001
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD +K+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKEKLVKAFKKKFAC 69
>AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eIF-1
protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL +FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 TIQNLQSFDPFADATKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein.
Length = 113
Score = 80.6 bits (190), Expect = 5e-15
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/39 (58%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSEDDVQDGL---VHVRIQQRNG 250
+IQNL +FDPFADA K +D + GL +H+RIQQRNG
Sbjct: 3 TIQNLQSFDPFADATK-GDDLLPAGLEDYIHIRIQQRNG 40
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>BT006645-1|AAP35291.1| 113|Homo sapiens putative translation
initiation factor protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>AF100737-1|AAD19900.1| 113|Homo sapiens putative translation
initiation factor A121/Sui1 protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 46.0 bits (104), Expect = 1e-04
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + VH+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYVHIRIQQRNGRK 42
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+ KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKPFKKKFAC 69
>AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein.
Length = 113
Score = 79.0 bits (186), Expect = 2e-14
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +3
Query: 339 GTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 467
GTV+EHPEYGEV+QLQGDQR+NICQ+L + GL K +QLKVHGF
Sbjct: 71 GTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +2
Query: 143 SIQNLNTFDPFADAIKSSE--DDVQDGLVHVRIQQRNGRR 256
+IQNL++FDPFADA K + + +H+RIQQRNGR+
Sbjct: 3 AIQNLHSFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRK 42
Score = 44.4 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +1
Query: 256 TLTTVQGLSSEYDLKKIVRACKKEFAC 336
TLTTVQG++ +YD KK+V+A KK+FAC
Sbjct: 43 TLTTVQGIADDYDKKKLVKAFKKKFAC 69
>AF490966-1|AAO11890.1| 138|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 138
Score = 30.3 bits (65), Expect = 6.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 412 WQIFSRWSP*SCSTSPYSGCSTTVPCTRTPSCMPARSSSGHIPRKGLAP 266
W F P S S SP G + T+PCTR+ + + + R G AP
Sbjct: 11 WASFMLTQPHSVSESP--GKTVTIPCTRSSGSIASNFVQWYQQRPGSAP 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,572,815
Number of Sequences: 237096
Number of extensions: 1936961
Number of successful extensions: 4850
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4827
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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