Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20078
(633 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopheri... 87 3e-16
UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9; Euteleostom... 80 4e-14
UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN bindin... 65 2e-09
UniRef50_O60518 Cluster: Ran-binding protein 6; n=68; Eumetazoa|... 64 3e-09
UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma j... 55 1e-06
UniRef50_Q00WP4 Cluster: Karyopherin (Importin) beta 3; n=1; Ost... 44 0.002
UniRef50_A7PYL2 Cluster: Chromosome chr12 scaffold_38, whole gen... 41 0.022
UniRef50_A5AVQ9 Cluster: Putative uncharacterized protein; n=2; ... 41 0.022
UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole geno... 40 0.066
UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2; Ca... 39 0.087
UniRef50_A5ZSJ8 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9
UniRef50_Q11QW5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_A0CES7 Cluster: Chromosome undetermined scaffold_172, w... 34 3.3
UniRef50_A4S6V4 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 4.3
UniRef50_UPI0000E22FCB Cluster: PREDICTED: tumor necrosis factor... 33 5.7
UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, ... 33 5.7
UniRef50_A4N750 Cluster: Putative Type I restriction enzyme EcoR... 33 7.5
UniRef50_A4LZG4 Cluster: Putative uncharacterized protein precur... 33 7.5
UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep: ... 33 7.5
UniRef50_Q89JE6 Cluster: Bll5337 protein; n=1; Bradyrhizobium ja... 32 10.0
>UniRef50_UPI0000DB70D1 Cluster: PREDICTED: similar to Karyopherin
3 CG1059-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Karyopherin 3 CG1059-PA - Apis mellifera
Length = 1040
Score = 87.0 bits (206), Expect = 3e-16
Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +1
Query: 16 NADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVC 195
NA + E++R AAVLLRRLFS+ Q L+EQ+LL++Q + ++ +RRKVC
Sbjct: 65 NATLTEEMRAMAAVLLRRLFSSEFMDFYPKIPPEAQAQLKEQILLSVQNEQTETIRRKVC 124
Query: 196 DVVSELARNHIDDDGNNQWPSSYS---SCL--PVPVRKIQTSKKLVLECLRLYQVYL 351
+V +E+ARN ID+DGNNQWP C PVP K + + +R ++
Sbjct: 125 EVAAEVARNLIDEDGNNQWPEFLQFLFQCANSPVPALKENALRMFTFQAVRAIGAFI 181
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 396 ISALQPNESMALRTQAVKAVGAFILLHDKEPIIQKHF 506
+ AL+ N QAV+A+GAFI+LHDKE IQKHF
Sbjct: 158 VPALKENALRMFTFQAVRAIGAFIILHDKEENIQKHF 194
Score = 36.7 bits (81), Expect = 0.46
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 497 KAFQDVLLPLMQVIVLSIEAADDDSALKVLIELADQHLNF 616
K F ++L ++QVI S+E DD+ LKVLI+LA+ F
Sbjct: 192 KHFSELLPAIVQVIAQSVEKQGDDALLKVLIDLAESTPKF 231
>UniRef50_Q5T576 Cluster: RAN binding protein 5; n=9;
Euteleostomi|Rep: RAN binding protein 5 - Homo sapiens
(Human)
Length = 126
Score = 80.2 bits (189), Expect = 4e-14
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +1
Query: 34 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSEL 213
+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+KVCD+ +EL
Sbjct: 28 EARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAEL 87
Query: 214 ARNHIDDDGNNQWP 255
ARN ID+DGNNQWP
Sbjct: 88 ARNLIDEDGNNQWP 101
>UniRef50_UPI0000DA3D66 Cluster: PREDICTED: similar to RAN binding
protein 5; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to RAN binding protein 5 - Rattus norvegicus
Length = 1056
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
I+N AE+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+K
Sbjct: 173 IRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKK 232
Query: 190 VCDVVSELARNHI 228
+CD+ +ELARN I
Sbjct: 233 ICDIAAELARNLI 245
>UniRef50_O60518 Cluster: Ran-binding protein 6; n=68;
Eumetazoa|Rep: Ran-binding protein 6 - Homo sapiens
(Human)
Length = 1105
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
++N +VRQ AA LLRRL S+ Q ++ +L+L ++++ +R+K
Sbjct: 57 VRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKK 116
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
+CD+ + LARN ID+DG N WP
Sbjct: 117 LCDIFAVLARNLIDEDGTNHWP 138
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/84 (29%), Positives = 47/84 (55%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+ +++ + E + +F PG+FG ++ +LD+IK +L +Q E A+R
Sbjct: 139 EGLKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIR 198
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AF+L ++ + K F
Sbjct: 199 TLSARAAAAFVLANENNIALFKDF 222
>UniRef50_Q5C159 Cluster: SJCHGC08761 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08761 protein - Schistosoma
japonicum (Blood fluke)
Length = 183
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
+ + + R AA+L RRL + ++QL+L + + Q +RRK
Sbjct: 63 LNDKSVVSQSRHMAAILGRRLLVNDYGSAFEPLPDETKNSAKQQLVLIVVHENEQLMRRK 122
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
V D++SEL R DDDGN++WP
Sbjct: 123 VADLISELVRMEFDDDGNSRWP 144
Score = 32.3 bits (70), Expect = 10.0
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTEN 371
EF + +++ D ++E +F SVP +FGN+Q ++
Sbjct: 145 EFTPILLDWSTSPDSGLREIACHIFGSVPSLFGNQQAQS 183
>UniRef50_Q00WP4 Cluster: Karyopherin (Importin) beta 3; n=1;
Ostreococcus tauri|Rep: Karyopherin (Importin) beta 3 -
Ostreococcus tauri
Length = 1024
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 234 RWQQPVAEF---LQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISA 404
RW P E+ L+FM CA++ + + R+F S+ + +E+ + G+ +A
Sbjct: 57 RWCVPTNEWPELLEFMGQCANSPETAHRALAFRLFESLTETIASALSEHFGTLAGLFANA 116
Query: 405 LQPNESMALRTQAVKAVGAFILLHDKEP 488
L+ +E +RT A++AVGA + EP
Sbjct: 117 LR-DECDEVRTSALRAVGALVANSSGEP 143
>UniRef50_A7PYL2 Cluster: Chromosome chr12 scaffold_38, whole genome
shotgun sequence; n=9; Magnoliophyta|Rep: Chromosome
chr12 scaffold_38, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1048
Score = 41.1 bits (92), Expect = 0.022
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
+ L F+F C+ + + +E + +F+S+ G + ++ +L+ LQ S +R
Sbjct: 118 DLLPFLFQCSQSAQEDHREVALILFSSLTETIGIAFRPHFADLQALLLKCLQDETSNRVR 177
Query: 435 TQAVKAVGAFI 467
A+KAVG+F+
Sbjct: 178 VAALKAVGSFL 188
>UniRef50_A5AVQ9 Cluster: Putative uncharacterized protein; n=2;
Magnoliophyta|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1028
Score = 41.1 bits (92), Expect = 0.022
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
+ L F+F C+ + + +E + +F+S+ G + ++ +L+ LQ S +R
Sbjct: 118 DLLPFLFQCSQSAQEDHREVALILFSSLTETIGIAFRPHFADLQALLLKCLQDETSNRVR 177
Query: 435 TQAVKAVGAFI 467
A+KAVG+F+
Sbjct: 178 VAALKAVGSFL 188
>UniRef50_A7PW36 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=15; Magnoliophyta|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1116
Score = 39.5 bits (88), Expect = 0.066
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = +1
Query: 34 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSEL 213
+ R AA+LLR+ + Q L+ LL +Q + ++ + +K+CD VSEL
Sbjct: 72 EARAMAAILLRKQLTRDDSYLWPNLSATTQANLKSILLDCVQRETAKTISKKLCDTVSEL 131
Query: 214 ARNHIDDDGNNQWPSSYSSCLPVPVRKIQTSKKLVLECLRLY 339
A + D G + C+ K+Q + L+ L Y
Sbjct: 132 ASGILPDGGWPELLPFMFQCVTSSNFKLQEAALLIFAQLSQY 173
>UniRef50_Q9N5V3 Cluster: Importin beta family protein 3; n=2;
Caenorhabditis|Rep: Importin beta family protein 3 -
Caenorhabditis elegans
Length = 1092
Score = 39.1 bits (87), Expect = 0.087
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 34 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSEL 213
D R T V LRR+ + + + ++L + + +++K+ D++SE+
Sbjct: 52 DARSTVLVFLRRVLARDWDAIWETLNEENKQRILAKVLEMIVHETELSIKKKIADLISEI 111
Query: 214 ARNHIDDDGNNQW 252
A N IDD G+ W
Sbjct: 112 ASNLIDDSGDMTW 124
>UniRef50_A5ZSJ8 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 732
Score = 34.7 bits (76), Expect = 1.9
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 133 REQLLLTLQM-DLSQYLRRKVCDVVSELARNHIDDDGNNQWPSSYSSCLP 279
R QL+L + D++ YL ++CD+V + +I D N ++YS+ LP
Sbjct: 443 RSQLVLDMSREDVTDYLTERICDIVEKADIQYIKWDMNRSLMAAYSAKLP 492
>UniRef50_Q11QW5 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 1888
Score = 34.3 bits (75), Expect = 2.5
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 118 QQTVLREQLLLTLQMDLSQYLRRKVCDVVSEL-ARNHIDDD--GNNQWPSSY 264
Q L E +L L DL ++L K+CD++ L ARN +D N W S Y
Sbjct: 1782 QHDPLEEYKILWLSEDLFEFLELKICDIIEGLFARNSTNDVVLKYNYWSSDY 1833
>UniRef50_A0CES7 Cluster: Chromosome undetermined scaffold_172,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_172,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1081
Score = 33.9 bits (74), Expect = 3.3
Identities = 9/33 (27%), Positives = 23/33 (69%)
Frame = +1
Query: 154 LQMDLSQYLRRKVCDVVSELARNHIDDDGNNQW 252
+++++S +R ++CD + E+ + +DD +N+W
Sbjct: 98 IEVEMSHIVRNQLCDTIGEIGGSLYEDDSHNEW 130
>UniRef50_A4S6V4 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 979
Score = 33.5 bits (73), Expect = 4.3
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +3
Query: 234 RWQQPVAEF---LQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISA 404
RW P E+ L+F+ CAS+ + + ++F S+ + + + + G+ +
Sbjct: 67 RWTVPQGEWNELLEFLGQCASSPETAHRALAFKLFESLTETIVSSLSHHFKTLAGLFANG 126
Query: 405 LQPNESMALRTQAVKAVGAFILLHDKEP 488
L +R A++AVGA + EP
Sbjct: 127 LVDAHD-EVRVSALRAVGALVANASGEP 153
>UniRef50_UPI0000E22FCB Cluster: PREDICTED: tumor necrosis factor
receptor 1; n=1; Pan troglodytes|Rep: PREDICTED: tumor
necrosis factor receptor 1 - Pan troglodytes
Length = 496
Score = 33.1 bits (72), Expect = 5.7
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF-CMMGSLSCSSIKAPTALTA*VRKAIDSFGCKADINMPFI 380
C R+N Y H +N+ +CF C + + P A+ SF CK +
Sbjct: 168 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSWPL-----FTSAVSSFSCKKSLE---- 218
Query: 379 TSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
+K + + N GT+ +L+P + FG C L+
Sbjct: 219 CTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 254
>UniRef50_A7R7P4 Cluster: Chromosome undetermined scaffold_1922, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1922, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 1180
Score = 33.1 bits (72), Expect = 5.7
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +1
Query: 121 QTVLREQLLLTLQMDLSQYLRRKVCDVVSELARNHIDDDGNNQWPSSYS---SCLPVPVR 291
Q L+ LL +Q ++ + +K+CD VSELA + + ++G WP+ S C+
Sbjct: 838 QLSLKSILLGCIQRKNAKSISKKLCDTVSELASSILLENG---WPNLLSFMFQCMTFDST 894
Query: 292 KIQTSKKLVLECLRLY 339
K+Q + L+ L Y
Sbjct: 895 KLQEAVFLIFAQLAQY 910
>UniRef50_A4N750 Cluster: Putative Type I restriction enzyme
EcoR124II specificity protein; n=1; Haemophilus
influenzae R3021|Rep: Putative Type I restriction enzyme
EcoR124II specificity protein - Haemophilus influenzae
R3021
Length = 259
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 202 VSELARNHIDDDGNNQWPSSYSS-CLPVPVRKIQTSKKLVLECL 330
++ L N +D D QW S+Y++ +P+P +QT +L+ L
Sbjct: 119 LNTLPNNQLDSDHKRQWISNYANKLIPIPPLSVQTEIVKILDAL 162
>UniRef50_A4LZG4 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter bemidjiensis Bem|Rep: Putative
uncharacterized protein precursor - Geobacter
bemidjiensis Bem
Length = 229
Score = 32.7 bits (71), Expect = 7.5
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -3
Query: 376 SKFSV*RFPNTPGTDVNILIPASLMFGSCALAQVNMNCRNSAT 248
S F+V R G+ ++L+ A+L+FG C LA+V++N + T
Sbjct: 23 STFNVQRSGVRVGSGASLLLLAALLFGGCTLAKVDVNVVSERT 65
>UniRef50_Q2UN71 Cluster: Karyopherin; n=14; Pezizomycotina|Rep:
Karyopherin - Aspergillus oryzae
Length = 1095
Score = 32.7 bits (71), Expect = 7.5
Identities = 16/70 (22%), Positives = 39/70 (55%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L +F + + D ++EA R+F++ PG+ + + D ++G+ + ++ +++R
Sbjct: 141 ELLGVLFQASQSPDAGLREAAFRIFSTTPGII---EKPHEDAVQGVFGKGFK-DDVVSVR 196
Query: 435 TQAVKAVGAF 464
A++A +F
Sbjct: 197 IAAMEAFASF 206
>UniRef50_Q89JE6 Cluster: Bll5337 protein; n=1; Bradyrhizobium
japonicum|Rep: Bll5337 protein - Bradyrhizobium
japonicum
Length = 345
Score = 32.3 bits (70), Expect = 10.0
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 527 MQVIVLSIEAADDDSALKVLIELADQHLN 613
++++ + I+A DDDS+L V++E D HL+
Sbjct: 111 LKLLTVPIQAVDDDSSLPVIVEDIDDHLS 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,290,659
Number of Sequences: 1657284
Number of extensions: 12331026
Number of successful extensions: 27042
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 26264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27036
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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