Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20078
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.49 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.5  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   4.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.1 bits (57), Expect = 0.49
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 131  SENNCYSPFKWIFPSTYEERFVM*SLNWLGIILMTMATTSGRVP 262
            S NNC++P KW + S         S  W+G  L+T A T   +P
Sbjct: 2756 SANNCWNPLKWDWRS---------SSTWIG--LLTGAVTGASIP 2788


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 310 SLMFGSCALAQVNMNCRNSAT 248
           +++ GSC +A +N+N  +SAT
Sbjct: 10  TIVNGSCNIASININTISSAT 30


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 325 ILIPASLMFGSCALAQVNM 269
           + +P +L+FGS  L Q+N+
Sbjct: 341 VSLPGTLLFGSANLTQLNL 359


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,800
Number of Sequences: 2352
Number of extensions: 14834
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)