Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20078
(633 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5... 87 4e-17
BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 p... 87 4e-17
BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein. 87 4e-17
BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein. 87 4e-17
AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 p... 87 4e-17
AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 p... 87 4e-17
U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein. 87 5e-17
AL356580-4|CAI13759.1| 126|Homo sapiens RAN binding protein 5 p... 80 6e-15
BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr... 64 4e-10
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p... 64 4e-10
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p... 64 4e-10
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein... 64 4e-10
AL356580-3|CAI13758.1| 76|Homo sapiens RAN binding protein 5 p... 31 2.6
BC132812-1|AAI32813.1| 1198|Homo sapiens FNDC3A protein protein. 30 5.9
BC070072-1|AAH70072.1| 853|Homo sapiens FNDC3A protein protein. 30 5.9
BC060816-1|AAH60816.1| 853|Homo sapiens FNDC3A protein protein. 30 5.9
AL137000-1|CAI39726.2| 1142|Homo sapiens fibronectin type III do... 30 5.9
AJ749707-1|CAG44603.1| 1134|Homo sapiens human gene expressed in... 30 5.9
AJ749706-1|CAG44602.1| 1198|Homo sapiens human gene expressed in... 30 5.9
AB023187-1|BAA76814.2| 1151|Homo sapiens KIAA0970 protein protein. 30 5.9
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.8
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.8
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.8
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 30 7.8
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 30 7.8
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 30 7.8
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 30 7.8
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 30 7.8
>Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5
protein.
Length = 1097
Score = 87.4 bits (207), Expect = 4e-17
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
I+N AE+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+K
Sbjct: 49 IRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKK 108
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
VCD+ +ELARN ID+DGNNQWP
Sbjct: 109 VCDIAAELARNLIDEDGNNQWP 130
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+F S+Q+ ++EA + +F + PG+FGN+Q LDVIK ML+ +Q E ++R
Sbjct: 131 EGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIR 190
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AFIL ++ + KHF
Sbjct: 191 TLSARATAAFILANEHNVALFKHF 214
>BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5
protein.
Length = 1115
Score = 87.4 bits (207), Expect = 4e-17
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
I+N AE+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+K
Sbjct: 67 IRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKK 126
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
VCD+ +ELARN ID+DGNNQWP
Sbjct: 127 VCDIAAELARNLIDEDGNNQWP 148
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+F S+Q+ ++EA + +F + PG+FGN+Q LDVIK ML+ +Q E ++R
Sbjct: 149 EGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIR 208
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AFIL ++ + KHF
Sbjct: 209 TLSARATAAFILANEHNVALFKHF 232
>BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 87.4 bits (207), Expect = 4e-17
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
I+N AE+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+K
Sbjct: 49 IRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKK 108
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
VCD+ +ELARN ID+DGNNQWP
Sbjct: 109 VCDIAAELARNLIDEDGNNQWP 130
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+F S+Q+ ++EA + +F + PG+FGN+Q LDVIK ML+ +Q E ++R
Sbjct: 131 EGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIR 190
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AFIL ++ + KHF
Sbjct: 191 TLSARATAAFILANEHNVALFKHF 214
>BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 87.4 bits (207), Expect = 4e-17
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
I+N AE+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+K
Sbjct: 49 IRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKK 108
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
VCD+ +ELARN ID+DGNNQWP
Sbjct: 109 VCDIAAELARNLIDEDGNNQWP 130
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+F S+Q+ ++EA + +F + PG+FGN+Q LDVIK ML+ +Q E ++R
Sbjct: 131 EGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIR 190
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AFIL ++ + KHF
Sbjct: 191 TLSARATAAFILANEHNVALFKHF 214
>AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 87.4 bits (207), Expect = 4e-17
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
I+N AE+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+K
Sbjct: 49 IRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKK 108
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
VCD+ +ELARN ID+DGNNQWP
Sbjct: 109 VCDIAAELARNLIDEDGNNQWP 130
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+F S+Q+ ++EA + +F + PG+FGN+Q LDVIK ML+ +Q E ++R
Sbjct: 131 EGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIR 190
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AFIL ++ + KHF
Sbjct: 191 TLSARATAAFILANEHNVALFKHF 214
>AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 87.4 bits (207), Expect = 4e-17
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
I+N AE+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+K
Sbjct: 49 IRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKK 108
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
VCD+ +ELARN ID+DGNNQWP
Sbjct: 109 VCDIAAELARNLIDEDGNNQWP 130
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+F S+Q+ ++EA + +F + PG+FGN+Q LDVIK ML+ +Q E ++R
Sbjct: 131 EGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIR 190
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AFIL ++ + KHF
Sbjct: 191 TLSARATAAFILANEHNVALFKHF 214
>U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein.
Length = 1097
Score = 87.0 bits (206), Expect = 5e-17
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
I+N AE+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+K
Sbjct: 49 IRNTTAAEEARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQXSMRKK 108
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
VCD+ +ELARN ID+DGNNQWP
Sbjct: 109 VCDIAAELARNLIDEDGNNQWP 130
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+F S+Q+ ++EA + +F + PG+FGN+Q LDVIK ML+ +Q E ++R
Sbjct: 131 EGLKFLFDSVSSQNVGLREAALHIFWNFPGIFGNQQQHYLDVIKRMLVQCMQDQEHPSIR 190
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AFIL ++ + KHF
Sbjct: 191 TLSARATAAFILANEHNVALFKHF 214
>AL356580-4|CAI13759.1| 126|Homo sapiens RAN binding protein 5
protein.
Length = 126
Score = 80.2 bits (189), Expect = 6e-15
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +1
Query: 34 DVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRKVCDVVSEL 213
+ RQ AAVLLRRL S+ QT ++ +LL+ +QM+ +R+KVCD+ +EL
Sbjct: 28 EARQMAAVLLRRLLSSAFDEVYPALPSDVQTAIKSELLMIIQMETQSSMRKKVCDIAAEL 87
Query: 214 ARNHIDDDGNNQWP 255
ARN ID+DGNNQWP
Sbjct: 88 ARNLIDEDGNNQWP 101
>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
protein.
Length = 1109
Score = 64.1 bits (149), Expect = 4e-10
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
++N +VRQ AA LLRRL S+ Q ++ +L+L ++++ +R+K
Sbjct: 61 VRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKK 120
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
+CD+ + LARN ID+DG N WP
Sbjct: 121 LCDIFAVLARNLIDEDGTNHWP 142
Score = 54.0 bits (124), Expect = 4e-07
Identities = 25/84 (29%), Positives = 47/84 (55%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+ +++ + E + +F PG+FG ++ +LD+IK +L +Q E A+R
Sbjct: 143 EGLKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIR 202
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AF+L ++ + K F
Sbjct: 203 TLSARAAAAFVLANENNIALFKDF 226
>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 64.1 bits (149), Expect = 4e-10
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
++N +VRQ AA LLRRL S+ Q ++ +L+L ++++ +R+K
Sbjct: 57 VRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKK 116
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
+CD+ + LARN ID+DG N WP
Sbjct: 117 LCDIFAVLARNLIDEDGTNHWP 138
Score = 54.0 bits (124), Expect = 4e-07
Identities = 25/84 (29%), Positives = 47/84 (55%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+ +++ + E + +F PG+FG ++ +LD+IK +L +Q E A+R
Sbjct: 139 EGLKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIR 198
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AF+L ++ + K F
Sbjct: 199 TLSARAAAAFVLANENNIALFKDF 222
>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 64.1 bits (149), Expect = 4e-10
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
++N +VRQ AA LLRRL S+ Q ++ +L+L ++++ +R+K
Sbjct: 57 VRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKK 116
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
+CD+ + LARN ID+DG N WP
Sbjct: 117 LCDIFAVLARNLIDEDGTNHWP 138
Score = 54.0 bits (124), Expect = 4e-07
Identities = 25/84 (29%), Positives = 47/84 (55%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+ +++ + E + +F PG+FG ++ +LD+IK +L +Q E A+R
Sbjct: 139 EGLKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIR 198
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AF+L ++ + K F
Sbjct: 199 TLSARAAAAFVLANENNIALFKDF 222
>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
protein.
Length = 1105
Score = 64.1 bits (149), Expect = 4e-10
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSAXXXXXXXXXXXXQQTVLREQLLLTLQMDLSQYLRRK 189
++N +VRQ AA LLRRL S+ Q ++ +L+L ++++ +R+K
Sbjct: 57 VRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKK 116
Query: 190 VCDVVSELARNHIDDDGNNQWP 255
+CD+ + LARN ID+DG N WP
Sbjct: 117 LCDIFAVLARNLIDEDGTNHWP 138
Score = 54.0 bits (124), Expect = 4e-07
Identities = 25/84 (29%), Positives = 47/84 (55%)
Frame = +3
Query: 255 EFLQFMFTCASAQDPNIKEAGIRMFTSVPGVFGNRQTENLDVIKGMLISALQPNESMALR 434
E L+F+ +++ + E + +F PG+FG ++ +LD+IK +L +Q E A+R
Sbjct: 139 EGLKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIR 198
Query: 435 TQAVKAVGAFILLHDKEPIIQKHF 506
T + +A AF+L ++ + K F
Sbjct: 199 TLSARAAAAFVLANENNIALFKDF 222
>AL356580-3|CAI13758.1| 76|Homo sapiens RAN binding protein 5
protein.
Length = 76
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 10 IQNADIAEDVRQTAAVLLRRLFSA 81
I+N AE+ RQ AAVLLRRL S+
Sbjct: 49 IRNTTAAEEARQMAAVLLRRLLSS 72
>BC132812-1|AAI32813.1| 1198|Homo sapiens FNDC3A protein protein.
Length = 1198
Score = 30.3 bits (65), Expect = 5.9
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 348 FGNRQTENLDVIKGMLISALQPNESMALRTQAVKAVGA 461
FG++Q+ + + +I+ LQP+ + +R QA+ ++GA
Sbjct: 899 FGDKQSLTVGKVTSYIINNLQPDTTYRIRIQALNSLGA 936
>BC070072-1|AAH70072.1| 853|Homo sapiens FNDC3A protein protein.
Length = 853
Score = 30.3 bits (65), Expect = 5.9
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 348 FGNRQTENLDVIKGMLISALQPNESMALRTQAVKAVGA 461
FG++Q+ + + +I+ LQP+ + +R QA+ ++GA
Sbjct: 554 FGDKQSLTVGKVTSYIINNLQPDTTYRIRIQALNSLGA 591
>BC060816-1|AAH60816.1| 853|Homo sapiens FNDC3A protein protein.
Length = 853
Score = 30.3 bits (65), Expect = 5.9
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 348 FGNRQTENLDVIKGMLISALQPNESMALRTQAVKAVGA 461
FG++Q+ + + +I+ LQP+ + +R QA+ ++GA
Sbjct: 554 FGDKQSLTVGKVTSYIINNLQPDTTYRIRIQALNSLGA 591
>AL137000-1|CAI39726.2| 1142|Homo sapiens fibronectin type III
domain containing 3A protein.
Length = 1142
Score = 30.3 bits (65), Expect = 5.9
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 348 FGNRQTENLDVIKGMLISALQPNESMALRTQAVKAVGA 461
FG++Q+ + + +I+ LQP+ + +R QA+ ++GA
Sbjct: 843 FGDKQSLTVGKVTSYIINNLQPDTTYRIRIQALNSLGA 880
>AJ749707-1|CAG44603.1| 1134|Homo sapiens human gene expressed in
odontoblast protein protein.
Length = 1134
Score = 30.3 bits (65), Expect = 5.9
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 348 FGNRQTENLDVIKGMLISALQPNESMALRTQAVKAVGA 461
FG++Q+ + + +I+ LQP+ + +R QA+ ++GA
Sbjct: 835 FGDKQSLTVGKVTSYIINNLQPDTTYRIRIQALNSLGA 872
>AJ749706-1|CAG44602.1| 1198|Homo sapiens human gene expressed in
odontoblast protein protein.
Length = 1198
Score = 30.3 bits (65), Expect = 5.9
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 348 FGNRQTENLDVIKGMLISALQPNESMALRTQAVKAVGA 461
FG++Q+ + + +I+ LQP+ + +R QA+ ++GA
Sbjct: 899 FGDKQSLTVGKVTSYIINNLQPDTTYRIRIQALNSLGA 936
>AB023187-1|BAA76814.2| 1151|Homo sapiens KIAA0970 protein protein.
Length = 1151
Score = 30.3 bits (65), Expect = 5.9
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 348 FGNRQTENLDVIKGMLISALQPNESMALRTQAVKAVGA 461
FG++Q+ + + +I+ LQP+ + +R QA+ ++GA
Sbjct: 852 FGDKQSLTVGKVTSYIINNLQPDTTYRIRIQALNSLGA 889
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 7.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF----CMMGS--LSCSSIKAPTALTA*VRKAIDSFGCKADI 395
C R+N Y H +N+ +CF C+ G+ LSC K T T + C +
Sbjct: 125 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE-KQNTVCTCHAGFFLRENECVSCS 183
Query: 394 N--MPFITSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
N +K + + N GT+ +L+P + FG C L+
Sbjct: 184 NCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 226
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 7.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF----CMMGS--LSCSSIKAPTALTA*VRKAIDSFGCKADI 395
C R+N Y H +N+ +CF C+ G+ LSC K T T + C +
Sbjct: 125 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE-KQNTVCTCHAGFFLRENECVSCS 183
Query: 394 N--MPFITSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
N +K + + N GT+ +L+P + FG C L+
Sbjct: 184 NCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 226
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 29.9 bits (64), Expect = 7.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF----CMMGS--LSCSSIKAPTALTA*VRKAIDSFGCKADI 395
C R+N Y H +N+ +CF C+ G+ LSC K T T + C +
Sbjct: 125 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE-KQNTVCTCHAGFFLRENECVSCS 183
Query: 394 N--MPFITSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
N +K + + N GT+ +L+P + FG C L+
Sbjct: 184 NCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 226
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 29.9 bits (64), Expect = 7.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF----CMMGS--LSCSSIKAPTALTA*VRKAIDSFGCKADI 395
C R+N Y H +N+ +CF C+ G+ LSC K T T + C +
Sbjct: 125 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE-KQNTVCTCHAGFFLRENECVSCS 183
Query: 394 N--MPFITSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
N +K + + N GT+ +L+P + FG C L+
Sbjct: 184 NCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 226
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 29.9 bits (64), Expect = 7.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF----CMMGS--LSCSSIKAPTALTA*VRKAIDSFGCKADI 395
C R+N Y H +N+ +CF C+ G+ LSC K T T + C +
Sbjct: 125 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE-KQNTVCTCHAGFFLRENECVSCS 183
Query: 394 N--MPFITSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
N +K + + N GT+ +L+P + FG C L+
Sbjct: 184 NCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 226
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 29.9 bits (64), Expect = 7.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF----CMMGS--LSCSSIKAPTALTA*VRKAIDSFGCKADI 395
C R+N Y H +N+ +CF C+ G+ LSC K T T + C +
Sbjct: 125 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE-KQNTVCTCHAGFFLRENECVSCS 183
Query: 394 N--MPFITSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
N +K + + N GT+ +L+P + FG C L+
Sbjct: 184 NCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 226
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 29.9 bits (64), Expect = 7.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF----CMMGS--LSCSSIKAPTALTA*VRKAIDSFGCKADI 395
C R+N Y H +N+ +CF C+ G+ LSC K T T + C +
Sbjct: 125 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE-KQNTVCTCHAGFFLRENECVSCS 183
Query: 394 N--MPFITSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
N +K + + N GT+ +L+P + FG C L+
Sbjct: 184 NCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 226
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 29.9 bits (64), Expect = 7.8
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -3
Query: 556 CFNRQNYYLHQR*KNILKCF----CMMGS--LSCSSIKAPTALTA*VRKAIDSFGCKADI 395
C R+N Y H +N+ +CF C+ G+ LSC K T T + C +
Sbjct: 125 CGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQE-KQNTVCTCHAGFFLRENECVSCS 183
Query: 394 N--MPFITSKFSV*RFPNTPGTD---VNILIPASLMFGSCALA 281
N +K + + N GT+ +L+P + FG C L+
Sbjct: 184 NCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLS 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,697,446
Number of Sequences: 237096
Number of extensions: 1909008
Number of successful extensions: 3342
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3334
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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