Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20074
(622 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 23 3.2
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 5.5
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 5.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 7.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.7
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.7
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 9.7
>AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein.
Length = 148
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +3
Query: 18 GTMSASNGKIIVQIGPVVSEPIRNRQTNKSFLFII 122
G+ G + + V +P+ N T FLF++
Sbjct: 38 GSYGPEAGNVSCSVSWEVHDPVTNSDTYIGFLFVL 72
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = +2
Query: 347 SKFC*VQLYIYMFVSLLCLSYASGRGLVHSTKVLQKCMTVA 469
SKF +Y + L + G G H T++ C+ ++
Sbjct: 705 SKFIGFTMYTTCIIWLAFVPIYFGTGNAHETQITTLCVAIS 745
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 5.5
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = +2
Query: 347 SKFC*VQLYIYMFVSLLCLSYASGRGLVHSTKVLQKCMTVA 469
SKF +Y + L + G G H T++ C+ ++
Sbjct: 795 SKFIGFTMYTTCIIWLAFVPIYFGTGNAHETQITTLCVAIS 835
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 351 NFVKFNYTYTCLSVYY 398
N K+NY C +YY
Sbjct: 94 NNYKYNYNNNCKKLYY 109
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 375 YTCLSVYYVYLMRVDEDLCTV 437
++CL + + L+ +D CTV
Sbjct: 376 WSCLFFFMLILIGLDSQFCTV 396
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 375 YTCLSVYYVYLMRVDEDLCTV 437
++CL + + L+ +D CTV
Sbjct: 429 WSCLFFFMLILIGLDSQFCTV 449
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +3
Query: 327 HFKNECVQNFVKFNYTYTCLSVYY 398
H N N+ NY C +YY
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +3
Query: 327 HFKNECVQNFVKFNYTYTCLSVYY 398
H N N+ NY C +YY
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +3
Query: 327 HFKNECVQNFVKFNYTYTCLSVYY 398
H N N+ NY C +YY
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 9.7
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = +3
Query: 327 HFKNECVQNFVKFNYTYTCLSVYY 398
H N N+ NY C +YY
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYY 114
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 508 YINTDSFVYYQYR 470
Y+NT+ FV QY+
Sbjct: 275 YVNTEQFVKSQYQ 287
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,107
Number of Sequences: 438
Number of extensions: 3356
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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