Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20069
(636 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 154 6e-38
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 153 1e-37
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 151 5e-37
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 128 4e-30
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 128 4e-30
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 124 5e-29
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 123 9e-29
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 123 9e-29
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 97 7e-21
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 97 7e-21
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 85 3e-17
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 85 3e-17
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 74 1e-13
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 31 0.91
AF100655-8|ABO16452.1| 470|Caenorhabditis elegans Hypothetical ... 30 1.2
AF100655-6|ABO16453.1| 470|Caenorhabditis elegans Hypothetical ... 30 1.2
AF100655-4|ABO16447.1| 470|Caenorhabditis elegans Hypothetical ... 30 1.2
AF045643-2|AAC02596.2| 663|Caenorhabditis elegans Hypothetical ... 30 1.2
Z73974-1|CAA98270.2| 349|Caenorhabditis elegans Hypothetical pr... 29 2.1
M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical pr... 28 6.4
M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF047663-8|AAK84581.1| 114|Caenorhabditis elegans Hypothetical ... 28 6.4
U21324-16|AAK93841.1| 169|Caenorhabditis elegans Arp2/3 complex... 27 8.5
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 154 bits (373), Expect = 6e-38
Identities = 72/106 (67%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 RQEEKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQD-GERLIG 421
+ E+K+ GT+IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAF+ D G+RLIG
Sbjct: 24 KTEKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIG 83
Query: 422 DAAKNQLTTNPENTVFDAKRLIGREWSDQLYNMMLSSSPSRSLKRT 559
DAAKNQLT NPENT+FDAKRLIGR+++D+ + P + + ++
Sbjct: 84 DAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKS 129
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
TVQ D+K +PFKV++K++KP V+V+ +K F PEE+SAMVL
Sbjct: 113 TVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 153 bits (370), Expect = 1e-37
Identities = 74/117 (63%), Positives = 92/117 (78%), Gaps = 1/117 (0%)
Frame = +2
Query: 254 EKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQD-GERLIGDAA 430
EK++ +GT+IGIDLGTTYSCVGV+KNGRVEIIANDQGNRITPSYVAF+ D GERLIGDAA
Sbjct: 24 EKEEKMGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAA 83
Query: 431 KNQLTTNPENTVFDAKRLIGREWSDQLYNMMLSSSPSRSLKRTANLMFKYKLHKATK 601
KNQLT NPENT+FDAKRLIGR ++++ + P + + ++ + K+ TK
Sbjct: 84 KNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETK 140
Score = 57.6 bits (133), Expect = 7e-09
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
TVQ D+K +PFK+V+K++KP+V+V+ K F PEE+SAMVL
Sbjct: 110 TVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 151 bits (365), Expect = 5e-37
Identities = 71/106 (66%), Positives = 87/106 (82%), Gaps = 1/106 (0%)
Frame = +2
Query: 245 RQEEKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQD-GERLIG 421
+ E+K+ T+IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAF+ D G+RLIG
Sbjct: 24 KTEKKETKYETIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIG 83
Query: 422 DAAKNQLTTNPENTVFDAKRLIGREWSDQLYNMMLSSSPSRSLKRT 559
DAAKNQLT NPENT+FDAKRLIGR+++D+ + P + + ++
Sbjct: 84 DAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKS 129
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
TVQ D+K +PFKV++K++KP V+V+ +K F PEE+SAMVL
Sbjct: 113 TVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVL 155
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 128 bits (308), Expect = 4e-30
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 460
+GIDLGTTYSCVGV+ +G+VEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 65
Query: 461 TVFDAKRLIGREWSD 505
TVFDAKRLIGR++ D
Sbjct: 66 TVFDAKRLIGRKFDD 80
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +1
Query: 505 PTVQHDVKFFPFKVVE-KNSKPHVQVQTSQGDKVFAPEEISAMVL 636
P VQ D+K +PFKV+ + +KP VQV+ +K+F PEEIS+MVL
Sbjct: 81 PAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVL 125
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 128 bits (308), Expect = 4e-30
Identities = 60/75 (80%), Positives = 67/75 (89%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 460
+GIDLGTTYSCVGV+ +G+VEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 65
Query: 461 TVFDAKRLIGREWSD 505
TVFDAKRLIGR++ D
Sbjct: 66 TVFDAKRLIGRKFDD 80
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +1
Query: 505 PTVQHDVKFFPFKVVE-KNSKPHVQVQTSQGDKVFAPEEISAMVL 636
P VQ D+K +PFKV+ + +KP VQV+ +K+F PEEIS+MVL
Sbjct: 81 PAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVL 125
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 124 bits (299), Expect = 5e-29
Identities = 56/76 (73%), Positives = 67/76 (88%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 460
IGIDLGTTYSCVG+Y+NG+VEI+AN +GN+ TPSYVAFT D ERL+GDAAK+Q NPEN
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 461 TVFDAKRLIGREWSDQ 508
TVFDAKRLIGR + ++
Sbjct: 66 TVFDAKRLIGRRFDEE 81
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
TVQ D+K +PF V K KP V+V+ + F EEISAMVL
Sbjct: 82 TVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAMVL 124
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 123 bits (297), Expect = 9e-29
Identities = 56/75 (74%), Positives = 66/75 (88%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 460
IGIDLGTTYSCVG+Y+NG+VEI+AN +GN+ TPSYVAFT D ERL+GDAAK+Q NPEN
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 461 TVFDAKRLIGREWSD 505
TVFDAKRLIGR + +
Sbjct: 66 TVFDAKRLIGRRFDE 80
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
TVQ D K +PF V K KP ++V+ + F PEEISAMVL
Sbjct: 82 TVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAMVL 124
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 123 bits (297), Expect = 9e-29
Identities = 56/75 (74%), Positives = 66/75 (88%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 460
IGIDLGTTYSCVG+Y+NG+VEI+AN +GN+ TPSYVAFT D ERL+GDAAK+Q NPEN
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 461 TVFDAKRLIGREWSD 505
TVFDAKRLIGR + +
Sbjct: 66 TVFDAKRLIGRRFDE 80
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
TVQ D K +PF V K KP ++V+ + F PEEISAMVL
Sbjct: 82 TVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAMVL 124
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 97.5 bits (232), Expect = 7e-21
Identities = 52/109 (47%), Positives = 63/109 (57%)
Frame = +2
Query: 227 RGRLCRRQEEKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDG 406
R L + DK G VIGIDLGTT SCV + + ++I N +G R TPS VAFT DG
Sbjct: 16 RSSLMSARSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADG 75
Query: 407 ERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQLYNMMLSSSPSRSLK 553
ERL+G AK Q TN NT+F KRLIGR + D L P + +K
Sbjct: 76 ERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVK 124
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 499 E*PTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
E P VQ D+K P+K+V K S V+ +QG K + P ++ A VL
Sbjct: 107 EDPEVQKDLKVVPYKIV-KASNGDAWVE-AQG-KEYPPSQVGAFVL 149
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 97.5 bits (232), Expect = 7e-21
Identities = 52/109 (47%), Positives = 63/109 (57%)
Frame = +2
Query: 227 RGRLCRRQEEKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDG 406
R L + DK G VIGIDLGTT SCV + + ++I N +G R TPS VAFT DG
Sbjct: 16 RSSLMSARSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADG 75
Query: 407 ERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQLYNMMLSSSPSRSLK 553
ERL+G AK Q TN NT+F KRLIGR + D L P + +K
Sbjct: 76 ERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVK 124
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 499 E*PTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
E P VQ D+K P+K+V K S V+ +QG KV++P ++ A VL
Sbjct: 107 EDPEVQKDLKVVPYKIV-KASNGDAWVE-AQG-KVYSPSQVGAFVL 149
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 85.4 bits (202), Expect = 3e-17
Identities = 46/109 (42%), Positives = 68/109 (62%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 460
IGIDLGTT+SCV Y+NG+V I+ N+ G R TPS +A +DG+ LIG AK+ + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKD-VIGKATN 61
Query: 461 TVFDAKRLIGREWSDQLYNMMLSSSPSRSLKRTANLMFKYKLHKATKYL 607
++FD KR+IGR + D L + P + +++ N + ++HK K L
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFK-VEKDDNGIPYLEIHKNEKPL 109
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 85.4 bits (202), Expect = 3e-17
Identities = 46/109 (42%), Positives = 68/109 (62%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 460
IGIDLGTT+SCV Y+NG+V I+ N+ G R TPS +A +DG+ LIG AK+ + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKD-VIGKATN 61
Query: 461 TVFDAKRLIGREWSDQLYNMMLSSSPSRSLKRTANLMFKYKLHKATKYL 607
++FD KR+IGR + D L + P + +++ N + ++HK K L
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFK-VEKDDNGIPYLEIHKNEKPL 109
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +2
Query: 278 VIGIDLGTTYSCVGVYK--NGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 451
+ GIDLGTTYS +G+Y G I+ +D G + PS VAF +G LIG A Q N
Sbjct: 35 IAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHN 94
Query: 452 PENTVFDAKRLIGREW 499
P+ T++DAKR IGR +
Sbjct: 95 PKRTIYDAKRFIGRNF 110
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/93 (36%), Positives = 55/93 (59%)
Frame = +2
Query: 275 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 454
+V+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ +TTN
Sbjct: 2 SVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPK-DRSMGVAARQAVTTNI 60
Query: 455 ENTVFDAKRLIGREWSDQLYNMMLSSSPSRSLK 553
+NTV + K LIGR++SD + + P + +K
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVK 93
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 287 IDLGTTYSCVGVYKNG-RVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPENT 463
IDLGT + +G+ K G ++I N + R TP+ V QDG R DAA P
Sbjct: 29 IDLGTQFLKIGIVKPGIPMDIALNTESRRKTPN-VVMIQDGHRTFADAAIGMQVRYPHLV 87
Query: 464 VFDAKRLIGR 493
L+G+
Sbjct: 88 HGQLNDLVGK 97
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 30.7 bits (66), Expect = 0.91
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 296 GTTYSCVGVYKNGRVEIIANDQGNRITPSYVAF---TQDGE-RLIGDAAKNQLT 445
G +G Y + +I +DQ + +T + AF T DG+ ++ GD AKN+ T
Sbjct: 40 GCNKRIIGYYFATQTSVITSDQVSNLTHAVFAFVNITSDGQLQIDGDLAKNRFT 93
>AF100655-8|ABO16452.1| 470|Caenorhabditis elegans Hypothetical
protein C44C8.8 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 332 GRVEIIANDQGNRITPSYVAFTQDGERLIG-DAAKNQLTTNPENTVFDAKRLIGREWSD- 505
GRVE+ D+ Y+ G R + + +L +P+ + K + +
Sbjct: 175 GRVEVFNYDRKMHEALKYLLGKLFGGRTVKVNRFAIELDEDPDEIFVNLKEFKDIDRPEL 234
Query: 506 QLYNMMLSSSPSRSLKRTANLMFKYKLHKATKYLLLK 616
Y+++L++ PSR +L + KLH+ATKYLL K
Sbjct: 235 SSYHILLTARPSRE-----DLSNERKLHEATKYLLKK 266
>AF100655-6|ABO16453.1| 470|Caenorhabditis elegans Hypothetical
protein C44C8.9 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 332 GRVEIIANDQGNRITPSYVAFTQDGERLIG-DAAKNQLTTNPENTVFDAKRLIGREWSD- 505
GRVE+ D+ Y+ G R + + +L +P+ + K + +
Sbjct: 175 GRVEVFNYDRKMHEALKYLLGKLFGGRTVKVNRFAIELDEDPDEIFVNLKEFKDIDRPEL 234
Query: 506 QLYNMMLSSSPSRSLKRTANLMFKYKLHKATKYLLLK 616
Y+++L++ PSR +L + KLH+ATKYLL K
Sbjct: 235 SSYHILLTARPSRE-----DLSNERKLHEATKYLLKK 266
>AF100655-4|ABO16447.1| 470|Caenorhabditis elegans Hypothetical
protein C44C8.10 protein.
Length = 470
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 332 GRVEIIANDQGNRITPSYVAFTQDGERLIG-DAAKNQLTTNPENTVFDAKRLIGREWSD- 505
GRVE+ D+ Y+ G R + + +L +P+ + K + +
Sbjct: 175 GRVEVFNYDRKMHEALKYLLGKLFGGRTVKVNRFAIELDEDPDEIFVNLKEFKDIDRPEL 234
Query: 506 QLYNMMLSSSPSRSLKRTANLMFKYKLHKATKYLLLK 616
Y+++L++ PSR +L + KLH+ATKYLL K
Sbjct: 235 SSYHILLTARPSRE-----DLSNERKLHEATKYLLKK 266
>AF045643-2|AAC02596.2| 663|Caenorhabditis elegans Hypothetical
protein F58H7.7 protein.
Length = 663
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +2
Query: 332 GRVEIIANDQGNRITPSYVAFTQDGERLIG-DAAKNQLTTNPENTVFDAKRLIGREWSD- 505
GRVE+ D+ Y+ G R + + +L +P+ + K + +
Sbjct: 175 GRVEVFNYDRKMHEALKYLLGKLFGGRTVKVNRFAIELDEDPDEIFVNLKEFKDIDRPEL 234
Query: 506 QLYNMMLSSSPSRSLKRTANLMFKYKLHKATKYLLLK 616
Y+++L++ PSR +L + KLH+ATKYLL K
Sbjct: 235 SSYHILLTARPSRE-----DLSNERKLHEATKYLLKK 266
>Z73974-1|CAA98270.2| 349|Caenorhabditis elegans Hypothetical
protein F29F11.3 protein.
Length = 349
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 5 TRRRELSRVFLEQLNEKYRCTV*IRKCLIKAF*SDL 112
T R+EL RV E+ +K C++ I KC++ DL
Sbjct: 173 TYRKELERVLKEKCLQKIACSMGILKCMVPDHADDL 208
>M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical
protein ZK370.4b protein.
Length = 1353
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 434 NQLTTNPENTVFDAKRLIGREWSDQLYNMMLSSSPSRS 547
N + + + + A+R+ R+W+ +LY ++ SP R+
Sbjct: 112 NMVNSASGSNLSGARRMRKRDWAKKLYKSLVQDSPGRT 149
>M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical
protein ZK370.4a protein.
Length = 1342
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 434 NQLTTNPENTVFDAKRLIGREWSDQLYNMMLSSSPSRS 547
N + + + + A+R+ R+W+ +LY ++ SP R+
Sbjct: 112 NMVNSASGSNLSGARRMRKRDWAKKLYKSLVQDSPGRT 149
>AF047663-8|AAK84581.1| 114|Caenorhabditis elegans Hypothetical
protein W09G12.5 protein.
Length = 114
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 398 QDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQL--YNMMLSSSPSRSLK 553
QD E L+ + AK P+ +F + L+G E DQL +N L++ S K
Sbjct: 2 QDNEPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHASPGQK 55
>U21324-16|AAK93841.1| 169|Caenorhabditis elegans Arp2/3 complex
component protein 6 protein.
Length = 169
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 532 FPFKVVEKNSKPHVQVQTSQ 591
F +VVE+++KP V+VQTS+
Sbjct: 25 FSSQVVERHNKPEVEVQTSK 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,932,021
Number of Sequences: 27780
Number of extensions: 321900
Number of successful extensions: 756
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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