Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20069
(636 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 135 2e-32
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 135 2e-32
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 135 2e-32
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 132 2e-31
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 131 3e-31
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 130 6e-31
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 130 6e-31
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 130 6e-31
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 129 2e-30
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 128 2e-30
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 92 3e-19
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 88 4e-18
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 87 9e-18
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 85 5e-17
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 64 7e-11
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 64 7e-11
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 64 7e-11
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 57 9e-09
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 41 6e-04
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 41 6e-04
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 38 0.007
At1g22190.1 68414.m02775 AP2 domain-containing transcription fac... 31 0.64
At5g23520.1 68418.m02760 expressed protein 29 3.4
At5g01550.1 68418.m00070 lectin protein kinase, putative similar... 28 6.0
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 135 bits (327), Expect = 2e-32
Identities = 64/86 (74%), Positives = 73/86 (84%)
Frame = +2
Query: 251 EEKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAA 430
+E+ +G+VIGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+V FT D ERLIG+AA
Sbjct: 28 KEEATKLGSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFT-DSERLIGEAA 86
Query: 431 KNQLTTNPENTVFDAKRLIGREWSDQ 508
KNQ NPE TVFD KRLIGR++ D+
Sbjct: 87 KNQAAVNPERTVFDVKRLIGRKFEDK 112
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 VQHDVKFFPFKVVEKNSKPHVQVQTSQGD-KVFAPEEISAMVL 636
VQ D K P+++V K+ KP++QV+ G+ KVF+PEEISAM+L
Sbjct: 114 VQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMIL 156
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 135 bits (327), Expect = 2e-32
Identities = 64/86 (74%), Positives = 73/86 (84%)
Frame = +2
Query: 251 EEKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAA 430
+E+ +G+VIGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+V FT D ERLIG+AA
Sbjct: 28 KEEATKLGSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFT-DSERLIGEAA 86
Query: 431 KNQLTTNPENTVFDAKRLIGREWSDQ 508
KNQ NPE TVFD KRLIGR++ D+
Sbjct: 87 KNQAAVNPERTVFDVKRLIGRKFEDK 112
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 VQHDVKFFPFKVVEKNSKPHVQVQTSQGD-KVFAPEEISAMVL 636
VQ D K P+++V K+ KP++QV+ G+ KVF+PEEISAM+L
Sbjct: 114 VQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMIL 156
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 135 bits (327), Expect = 2e-32
Identities = 69/97 (71%), Positives = 76/97 (78%)
Frame = +2
Query: 218 FGGRGRLCRRQEEKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFT 397
FG L EE K +G+VIGIDLGTTYSCVGVYKNG VEIIANDQGNRITPS+V FT
Sbjct: 18 FGCLFALSSAIEEATK-LGSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFT 76
Query: 398 QDGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDQ 508
D ERLIG+AAKNQ NPE TVFD KRLIGR++ D+
Sbjct: 77 -DSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDK 112
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/43 (53%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 VQHDVKFFPFKVVEKNSKPHVQVQTSQGD-KVFAPEEISAMVL 636
VQ D K P+++V K+ KP++QV+ G+ KVF+PEEISAM+L
Sbjct: 114 VQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMIL 156
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 132 bits (318), Expect = 2e-31
Identities = 63/85 (74%), Positives = 72/85 (84%)
Frame = +2
Query: 251 EEKDKDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAA 430
E +++ +GTVIGIDLGTTYSCVGVY N VEIIANDQGNRITPS+VAFT D ERLIG+AA
Sbjct: 43 EGEEQKLGTVIGIDLGTTYSCVGVYHNKHVEIIANDQGNRITPSWVAFT-DTERLIGEAA 101
Query: 431 KNQLTTNPENTVFDAKRLIGREWSD 505
KNQ NPE T+FD KRLIGR++ D
Sbjct: 102 KNQAAKNPERTIFDPKRLIGRKFDD 126
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = +1
Query: 505 PTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
P VQ D+KF P+KVV K+ KP++QV+ +K+F+PEEISAM+L
Sbjct: 127 PDVQRDIKFLPYKVVNKDGKPYIQVKVKGEEKLFSPEEISAMIL 170
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 131 bits (317), Expect = 3e-31
Identities = 64/81 (79%), Positives = 69/81 (85%)
Frame = +2
Query: 263 KDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQL 442
K G IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+
Sbjct: 4 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQV 62
Query: 443 TTNPENTVFDAKRLIGREWSD 505
NP NTVFDAKRLIGR +SD
Sbjct: 63 AMNPTNTVFDAKRLIGRRYSD 83
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 505 PTVQHDVKFFPFKVVE-KNSKPHVQVQTSQGDKVFAPEEISAMVL 636
P+VQ D +PFKVV KP + V +K F+ EEIS+MVL
Sbjct: 84 PSVQADKSHWPFKVVSGPGEKPMIVVNHKGEEKQFSAEEISSMVL 128
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 130 bits (315), Expect = 6e-31
Identities = 64/81 (79%), Positives = 69/81 (85%)
Frame = +2
Query: 263 KDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQL 442
K G IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+
Sbjct: 4 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQV 62
Query: 443 TTNPENTVFDAKRLIGREWSD 505
NP NTVFDAKRLIGR +SD
Sbjct: 63 AMNPVNTVFDAKRLIGRRFSD 83
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 TVQHDVKFFPFKV-VEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
+VQ D+K +PFK+ KP + V+ +K FA EEIS+MVL
Sbjct: 85 SVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISSMVL 128
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 130 bits (315), Expect = 6e-31
Identities = 64/81 (79%), Positives = 69/81 (85%)
Frame = +2
Query: 263 KDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQL 442
K G IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+
Sbjct: 4 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQV 62
Query: 443 TTNPENTVFDAKRLIGREWSD 505
NP NTVFDAKRLIGR +SD
Sbjct: 63 AMNPVNTVFDAKRLIGRRFSD 83
Score = 35.1 bits (77), Expect = 0.039
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNS-KPHVQVQTSQGDKVFAPEEISAMVL 636
+VQ D + +PF ++ + KP + V+ +K FA EEIS+MVL
Sbjct: 85 SVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISSMVL 128
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 130 bits (315), Expect = 6e-31
Identities = 64/81 (79%), Positives = 69/81 (85%)
Frame = +2
Query: 263 KDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQL 442
K G IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+
Sbjct: 4 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQV 62
Query: 443 TTNPENTVFDAKRLIGREWSD 505
NP NTVFDAKRLIGR +SD
Sbjct: 63 AMNPVNTVFDAKRLIGRRFSD 83
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNS-KPHVQVQTSQGDKVFAPEEISAMVL 636
+VQ D+KF+PFKV + KP + V +K FA EEIS+MVL
Sbjct: 85 SVQSDMKFWPFKVTPGQADKPMIFVNYKGEEKQFAAEEISSMVL 128
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 129 bits (311), Expect = 2e-30
Identities = 63/81 (77%), Positives = 69/81 (85%)
Frame = +2
Query: 263 KDIGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQL 442
K G IGIDLGTTYSCVGV+++ RVEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+
Sbjct: 4 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQV 62
Query: 443 TTNPENTVFDAKRLIGREWSD 505
NP NTVFDAKRLIGR ++D
Sbjct: 63 AMNPINTVFDAKRLIGRRFTD 83
Score = 34.7 bits (76), Expect = 0.052
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 TVQHDVKFFPFKVVEKNS-KPHVQVQTSQGDKVFAPEEISAMVL 636
+VQ D+K +PF + + KP + V DK F+ EEIS+M+L
Sbjct: 85 SVQSDIKLWPFTLKSGPAEKPMIVVNYKGEDKEFSAEEISSMIL 128
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 128 bits (310), Expect = 2e-30
Identities = 62/75 (82%), Positives = 67/75 (89%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 460
IGIDLGTTYSCVGV+ N RVEII NDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP+N
Sbjct: 9 IGIDLGTTYSCVGVWMNDRVEIIPNDQGNRTTPSYVAFT-DTERLIGDAAKNQVALNPQN 67
Query: 461 TVFDAKRLIGREWSD 505
TVFDAKRLIGR++SD
Sbjct: 68 TVFDAKRLIGRKFSD 82
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 505 PTVQHDVKFFPFKVVE-KNSKPHVQVQTSQGDKVFAPEEISAMVL 636
P+VQ D+ +PFKVV KP + V +K F+PEEIS+MVL
Sbjct: 83 PSVQSDILHWPFKVVSGPGEKPMIVVSYKNEEKQFSPEEISSMVL 127
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 91.9 bits (218), Expect = 3e-19
Identities = 45/92 (48%), Positives = 56/92 (60%)
Frame = +2
Query: 278 VIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE 457
VIGIDLGTT SCV V + +I N +G+R TPS VA Q GE L+G AK Q TNP
Sbjct: 54 VIGIDLGTTNSCVSVMEGKTARVIENAEGSRTTPSVVAMNQKGELLVGTPAKRQAVTNPT 113
Query: 458 NTVFDAKRLIGREWSDQLYNMMLSSSPSRSLK 553
NT+F +KRLIGR + D + P + +K
Sbjct: 114 NTIFGSKRLIGRRFDDPQTQKEMKMVPYKIVK 145
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +2
Query: 278 VIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE 457
V+GIDLGTT S V + G+ I+ N +G R TPS VA+T+ G+RL+G AK Q NPE
Sbjct: 80 VVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSGDRLVGQIAKRQAVVNPE 139
Query: 458 NTVFDAKRLIGREWSD 505
NT F KR IGR+ ++
Sbjct: 140 NTFFSVKRFIGRKMNE 155
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 87.0 bits (206), Expect = 9e-18
Identities = 43/76 (56%), Positives = 50/76 (65%)
Frame = +2
Query: 278 VIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE 457
VIGIDLGTT SCV V + ++I N +G R TPS VAF GE L+G AK Q TNP
Sbjct: 59 VIGIDLGTTNSCVAVMEGKNPKVIENAEGARTTPSVVAFNTKGELLVGTPAKRQAVTNPT 118
Query: 458 NTVFDAKRLIGREWSD 505
NTV KRLIGR++ D
Sbjct: 119 NTVSGTKRLIGRKFDD 134
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 84.6 bits (200), Expect = 5e-17
Identities = 38/76 (50%), Positives = 49/76 (64%)
Frame = +2
Query: 278 VIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE 457
V+GIDLGTT S V + G+ I+ N +G R TPS VA+T+ +RL+G AK Q NPE
Sbjct: 80 VVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSKDRLVGQIAKRQAVVNPE 139
Query: 458 NTVFDAKRLIGREWSD 505
NT F KR IGR ++
Sbjct: 140 NTFFSVKRFIGRRMNE 155
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 64.1 bits (149), Expect = 7e-11
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = +2
Query: 275 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 454
+V+G D G V V + ++++ ND+ NR TP+ V F D +R IG A NP
Sbjct: 2 SVVGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFG-DKQRFIGTAGAASTMMNP 60
Query: 455 ENTVFDAKRLIGREWSDQLYNMMLSSSP 538
+N++ KRLIGR++SD + S P
Sbjct: 61 KNSISQIKRLIGRQFSDPELQRDIKSLP 88
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 505 PTVQHDVKFFPFKVVE-KNSKPHVQVQTSQGDKVFAPEEISAMVL 636
P +Q D+K PF V E + P + + F P ++ M+L
Sbjct: 78 PELQRDIKSLPFSVTEGPDGYPLIHANYLGEKRAFTPTQVMGMML 122
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 64.1 bits (149), Expect = 7e-11
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = +2
Query: 275 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 454
+V+G D G V V + ++++ ND+ NR TP+ V F D +R IG A NP
Sbjct: 2 SVVGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFG-DKQRFIGTAGAASTMMNP 60
Query: 455 ENTVFDAKRLIGREWSDQLYNMMLSSSP 538
+N++ KRLIGR++SD + S P
Sbjct: 61 KNSISQIKRLIGRQFSDPELQRDIKSLP 88
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 64.1 bits (149), Expect = 7e-11
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = +2
Query: 275 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 454
+V+G D G V V + ++++ ND+ NR TP+ V F D +R IG A NP
Sbjct: 2 SVVGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFG-DKQRFIGTAGAASTMMNP 60
Query: 455 ENTVFDAKRLIGREWSDQLYNMMLSSSP 538
+N++ KRLIGR++SD + S P
Sbjct: 61 KNSISQIKRLIGRQFSDPELQRDIKSLP 88
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Frame = +2
Query: 275 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 454
+V+G D+G + V K ++++ ND+ NR P+ V+F + +R +G AA T +P
Sbjct: 2 SVVGFDVGNENCVIAVAKQRGIDVLLNDESNRENPAMVSFGEK-QRFMGAAAAASATMHP 60
Query: 455 ENTVFDAKRLIGREWSD 505
++T+ KRLIGR++ +
Sbjct: 61 KSTISQLKRLIGRKFRE 77
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +1
Query: 505 PTVQHDVKFFPFKVVEKNSKPHVQVQTSQGDKV--FAPEEISAMVL 636
P VQ+D++ FPF+ E +S +Q++ ++ F+P +I M+L
Sbjct: 78 PDVQNDLRLFPFETSE-DSDGGIQIRLRYMGEIQSFSPVQILGMLL 122
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE- 457
+GID+GT+ + V+ +V I+ N + ++ S+V F + + NQL E
Sbjct: 31 LGIDIGTSQCSIAVWNGSQVHILRNTRNQKLIKSFVTFK---DEVPAGGVSNQLAHEQEM 87
Query: 458 ---NTVFDAKRLIGREWSD 505
+F+ KRL+GR +D
Sbjct: 88 LTGAAIFNMKRLVGRVDTD 106
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 281 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPE- 457
+GID+GT+ + V+ +V I+ N + ++ S+V F + + NQL E
Sbjct: 31 LGIDIGTSQCSIAVWNGSQVHILRNTRNQKLIKSFVTFK---DEVPAGGVSNQLAHEQEM 87
Query: 458 ---NTVFDAKRLIGREWSD 505
+F+ KRL+GR +D
Sbjct: 88 LTGAAIFNMKRLVGRVDTD 106
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 278 VIGIDLGTTYSCVGVY--KNGR--VEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLT 445
V+ +DLG+ + V V K G+ + + N+ R +P+ VAF Q G+RL+G+ A
Sbjct: 26 VLSVDLGSEWVKVAVVNLKRGQSPISVAINEMSKRKSPALVAF-QSGDRLLGEEAAGITA 84
Query: 446 TNPENTVFDAKRLIGR 493
P + ++G+
Sbjct: 85 RYPNKVYSQLRDMVGK 100
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 520 DVKFFPFKVVEKNSKPHVQVQTSQGDKVFAPEEISAMVL 636
D + PF +VE +S+ V ++ G V++ EE+ AM+L
Sbjct: 110 DSVYLPFDIVE-DSRGAVGIKIDDGSTVYSVEELLAMIL 147
>At1g22190.1 68414.m02775 AP2 domain-containing transcription
factor, putative similar to AP2 domain containing
protein RAP2.4 GI:2281633 from [Arabidopsis thaliana]
Length = 261
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 333 PFL*TPTHE*-VVPKSIPITVPMSLSFSSCRRHKRPRPPKLARTNSTAS*PCKIYR 169
PF+ +P+++ S+P + S H P+P + +T ++A+ P K+YR
Sbjct: 29 PFIKSPSNDSSAFAFSLPAPISYGSDLHSFSHHLSPKPVSMKQTGTSAAKPTKLYR 84
>At5g23520.1 68418.m02760 expressed protein
Length = 435
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 206 VRASFGGRGRLCRRQEEKDKDIGTVI 283
V ASFG RGRL R E +K +V+
Sbjct: 40 VNASFGVRGRLRRNHEPSEKSFSSVL 65
>At5g01550.1 68418.m00070 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733; contains protein kinase domain,
Pfam:PF00069; contains legume lectins alpha and beta
domains, Pfam:PF00138 and Pfam:PF00139
Length = 688
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 561 AVLFNDLEGEELNIMLYSWSLHSRPIRRLASKTV 460
A+L D + LN+ +Y +L SRP+R L S+ V
Sbjct: 203 AILDYDGPTQTLNLTVYPANLKSRPVRPLISRPV 236
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,698
Number of Sequences: 28952
Number of extensions: 296978
Number of successful extensions: 840
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -