Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20062
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0684 - 18670697-18670933,18671003-18671102,18671214-186712... 123 1e-28
01_06_1828 - 40174446-40174543,40175031-40175171,40176518-401767... 116 2e-26
05_07_0063 - 27428056-27428184,27428321-27428460,27428698-274289... 109 1e-24
01_06_0270 + 28048449-28048577,28048915-28048978,28049537-280496... 104 5e-23
10_08_0977 - 21985149-21985277,21985348-21985722,21985824-219858... 103 9e-23
09_06_0370 - 22610441-22610569,22610659-22611060,22611141-226111... 103 9e-23
03_05_0902 + 28643395-28643708,28643830-28643921,28644342-286444... 100 8e-22
03_02_0434 + 8403630-8405666 58 4e-09
04_01_0166 - 1861750-1862181,1862317-1863873 58 6e-09
08_02_0721 + 20401217-20401360,20401689-20401809,20401969-204020... 51 7e-07
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 48 5e-06
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 48 8e-06
09_02_0586 + 10948079-10948283,10948506-10948615 31 0.77
12_02_0351 - 17829874-17830005,17830250-17830267,17830544-178306... 31 1.0
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 31 1.0
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850... 31 1.0
07_01_0543 + 4008439-4008808,4009209-4009274,4009409-4009584 30 1.8
01_05_0691 + 24330491-24332269 28 5.4
02_05_0840 - 32118332-32118376,32118420-32118531,32119074-321191... 28 7.1
01_05_0597 - 23526705-23526749,23526794-23526905,23527068-235271... 28 7.1
06_01_0094 + 779097-779155,779882-781019,781732-782115,782842-78... 27 9.4
>04_03_0684 -
18670697-18670933,18671003-18671102,18671214-18671266,
18671664-18671810,18671901-18672031,18673064-18673088,
18673201-18673305,18673941-18674054,18674900-18674992,
18675101-18675193,18675951-18676057,18676442-18676490,
18677140-18677253,18677728-18677787,18677887-18677955,
18679154-18679255,18679338-18679366,18679450-18679732,
18680399-18680752
Length = 754
Score = 123 bits (297), Expect = 1e-28
Identities = 57/93 (61%), Positives = 73/93 (78%)
Frame = +1
Query: 259 QIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGT 438
+I+ MI Q+I+ SC+ILAVTPAN DLANSDAL+LAK DP G RTIGVITKLD+MD GT
Sbjct: 171 RIRSMIMQYIKHPSCIILAVTPANADLANSDALQLAKLADPDGSRTIGVITKLDIMDRGT 230
Query: 439 DARDVLENKLLPLRRGYIGVVNRCRKTLTVART 537
DAR+ L ++PL+ GY+GVVNR ++ + R+
Sbjct: 231 DARNFLLGNVIPLKLGYVGVVNRSQEDINFKRS 263
Score = 101 bits (241), Expect = 6e-22
Identities = 40/74 (54%), Positives = 59/74 (79%)
Frame = +2
Query: 32 EYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLP 211
E+ EFLH ++F DF++++ EI+ ETD+ G NKG+S I L+++SPNVL++TL+DLP
Sbjct: 95 EWGEFLHAPARRFHDFDQIKREIQLETDKEAGGNKGVSEKQIRLKIFSPNVLDITLVDLP 154
Query: 212 GLTKVPIGDQPIDI 253
G+T+VP+GDQP DI
Sbjct: 155 GITRVPVGDQPSDI 168
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLG 614
Q+DI+ ++ + ALA E KFF + P+Y L G
Sbjct: 255 QEDINFKRSVKDALAFEEKFFSTLPAYHGLTHCCG 289
>01_06_1828 -
40174446-40174543,40175031-40175171,40176518-40176719,
40176815-40176914,40177029-40177081,40177951-40178097,
40178184-40178341,40178509-40178599,40179415-40179522,
40179815-40179952,40180154-40180246,40180342-40180434,
40180528-40180637,40181087-40181135,40181324-40181437,
40181530-40181589,40181674-40181742,40182034-40182135,
40182235-40182263,40182348-40182630,40183574-40183960
Length = 874
Score = 116 bits (279), Expect = 2e-26
Identities = 51/88 (57%), Positives = 71/88 (80%)
Frame = +1
Query: 259 QIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGT 438
+I+ MI +I+ ++C+ILAV+PAN DL+NSDAL++A+ DP G RTIGVITKLD+MD GT
Sbjct: 182 RIRTMILSYIKHKTCIILAVSPANADLSNSDALQIARNADPDGSRTIGVITKLDIMDRGT 241
Query: 439 DARDVLENKLLPLRRGYIGVVNRCRKTL 522
DAR+ L ++PLR GY+GVVNR ++ +
Sbjct: 242 DARNFLLGNVIPLRLGYVGVVNRSQQDI 269
Score = 113 bits (272), Expect = 1e-25
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +2
Query: 32 EYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLP 211
E+ EFLH G++F DF E+R EI+AETDR G NKG+S I L++YSPNVLN+TL+DLP
Sbjct: 106 EWGEFLHLPGRRFYDFREIRREIQAETDREAGGNKGVSDKQIRLKIYSPNVLNITLVDLP 165
Query: 212 GLTKVPIGDQPIDI 253
G+TKVP+GDQP DI
Sbjct: 166 GITKVPVGDQPTDI 179
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLG 614
Q+DI I ALA E FF +HP+Y LA G
Sbjct: 266 QQDIKSDLSIKEALAREESFFRNHPAYNGLAQYCG 300
>05_07_0063 -
27428056-27428184,27428321-27428460,27428698-27428926,
27429231-27429281,27429411-27429636,27430230-27430300,
27430466-27430585,27430671-27430865,27431088-27431152,
27431232-27431322,27431607-27431707,27431767-27431817,
27432076-27432177,27432406-27432510,27432600-27432663,
27433023-27433151
Length = 622
Score = 109 bits (263), Expect = 1e-24
Identities = 49/89 (55%), Positives = 71/89 (79%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
Q I+ M+ FI + +C+ILAV+PAN DLA SDA+K+++EVDP+G RT GV+TK+DLMD+G
Sbjct: 172 QDIENMVRSFIEKPNCIILAVSPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKG 231
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
TDA D+LE + L++ +IGVVNR ++ +
Sbjct: 232 TDAVDILEGRSYRLQQQWIGVVNRSQQDI 260
Score = 103 bits (248), Expect = 9e-23
Identities = 50/76 (65%), Positives = 59/76 (77%)
Frame = +2
Query: 17 INGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLT 196
I+G+ EYAEF+H K+FTDF VR EI ETDR TG +K IS VPI+L +YSPNV+NLT
Sbjct: 79 IDGDREYAEFMHLPRKRFTDFALVRKEIADETDRETGRSKQISSVPIHLSIYSPNVVNLT 138
Query: 197 LIDLPGLTKVPIGDQP 244
LIDLPGLTKV +G P
Sbjct: 139 LIDLPGLTKVAVGPFP 154
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q+DI+ D+ AA ER++F + P Y+HLA R+G+
Sbjct: 257 QQDINKNVDMIAARRREREYFSTTPEYKHLAHRMGS 292
>01_06_0270 +
28048449-28048577,28048915-28048978,28049537-28049638,
28049971-28050021,28050075-28050172,28050395-28050485,
28050718-28050782,28050913-28051107,28051207-28051326,
28051592-28051662,28051787-28052012,28052330-28052407,
28052507-28052735,28052958-28053097,28053571-28053699
Length = 595
Score = 104 bits (250), Expect = 5e-23
Identities = 47/89 (52%), Positives = 70/89 (78%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
Q I+ M+ FI + +C+ILA++PAN DLA SDA+K+++EVDP+G RT GV+TK+DLMD+G
Sbjct: 136 QDIETMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPKGERTFGVLTKIDLMDKG 195
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
T+A D+LE + L+ +IGVVNR ++ +
Sbjct: 196 TNAVDMLEGRSYRLQYPWIGVVNRSQQDI 224
Score = 71.3 bits (167), Expect = 6e-13
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +2
Query: 86 VRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPI 232
VR EI ET+R TG K ISPVPI L +YSPNV++LTLIDLPGLTKV +
Sbjct: 67 VRKEIADETERATGHKKQISPVPIYLSIYSPNVVDLTLIDLPGLTKVAV 115
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q+DI+ D+ AA ER++F + Y++LA R+G+
Sbjct: 221 QQDINKSVDMIAARHIEREYFANTTEYKYLAHRMGS 256
>10_08_0977 -
21985149-21985277,21985348-21985722,21985824-21985874,
21985964-21986189,21986289-21986359,21986430-21986549,
21986641-21986835,21986921-21986985,21987894-21987984,
21988700-21988761,21988854-21988904,21989172-21989273,
21989873-21989980,21990071-21990134,21990246-21990392
Length = 618
Score = 103 bits (248), Expect = 9e-23
Identities = 45/84 (53%), Positives = 66/84 (78%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
Q I+ M+ ++ + +C+ILA++PAN D+A SDA+KLA++VDP G RT GV+TKLDLMD+G
Sbjct: 166 QDIENMVRSYVDKPNCIILAISPANQDIATSDAIKLARDVDPTGERTFGVLTKLDLMDKG 225
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
T+A DVLE + L+ ++G+VNR
Sbjct: 226 TNALDVLEGRSYRLQHPWVGIVNR 249
Score = 102 bits (244), Expect = 3e-22
Identities = 49/78 (62%), Positives = 59/78 (75%)
Frame = +2
Query: 20 NGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTL 199
+G EYAEFLH ++F DF VR EI+ ETDR+TG K ISPVPI+L +YSP+V+NLTL
Sbjct: 87 DGVQEYAEFLHMPKRRFNDFALVRKEIQDETDRLTGKTKQISPVPIHLSIYSPHVVNLTL 146
Query: 200 IDLPGLTKVPIGDQPIDI 253
IDLPGLTKV + QP I
Sbjct: 147 IDLPGLTKVAVEGQPESI 164
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
Q DI+ D+ A E++FF S P Y HL+ R+G+
Sbjct: 251 QADINKNIDMIIARRKEQEFFASSPEYSHLSSRMGS 286
>09_06_0370 -
22610441-22610569,22610659-22611060,22611141-22611191,
22611475-22611700,22612219-22612289,22612411-22612530,
22612618-22612812,22612995-22613059,22613306-22613396,
22613611-22613672,22613796-22613846,22614326-22614427,
22614876-22614939,22615104-22615247
Length = 590
Score = 103 bits (248), Expect = 9e-23
Identities = 45/82 (54%), Positives = 65/82 (79%)
Frame = +1
Query: 262 IKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTD 441
I+ M+ ++ + +C+ILA++PAN D+A SDA+KL+KEVDP G RT GV+TKLDLMD+GT+
Sbjct: 131 IENMVRSYVEKPNCIILAISPANQDIATSDAIKLSKEVDPSGERTFGVLTKLDLMDKGTN 190
Query: 442 ARDVLENKLLPLRRGYIGVVNR 507
A DVLE + L+ ++G+VNR
Sbjct: 191 ALDVLEGRAYRLQYPWVGIVNR 212
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/53 (73%), Positives = 43/53 (81%)
Frame = +2
Query: 86 VRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQP 244
VR EI ETDRVTG K ISPVPI+L +YSPNV+NLTLIDLPGLTKV + QP
Sbjct: 72 VRQEIADETDRVTGKTKQISPVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQP 124
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGTLTTASV 635
Q DI+ + D+ A ER++F + P Y HLA ++G++ A +
Sbjct: 214 QADINRKVDMIVAREKEREYFENSPDYAHLASKMGSVYLAKL 255
>03_05_0902 +
28643395-28643708,28643830-28643921,28644342-28644443,
28645135-28645185,28645267-28645328,28645664-28645754,
28645911-28645975,28646053-28646247,28646346-28646465,
28646630-28646700,28646839-28647064,28647474-28647524,
28647629-28647857,28648140-28648279,28648527-28648652
Length = 644
Score = 100 bits (240), Expect = 8e-22
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = +2
Query: 23 GNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLI 202
G EYAEFLH K+FTDF VR EI ETDR+TG K IS +PI+L +YSP+V+NLTLI
Sbjct: 117 GGQEYAEFLHAPRKRFTDFAAVRKEIADETDRITGKTKAISNIPIHLSIYSPHVVNLTLI 176
Query: 203 DLPGLTKVPIGDQ 241
DLPGLTKV + Q
Sbjct: 177 DLPGLTKVAVEGQ 189
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/84 (52%), Positives = 65/84 (77%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
Q I+ M+ ++ + + +ILA++PAN D+A SDA+KLA++VDP G RT GV+TKLDLMD+G
Sbjct: 195 QDIENMVRSYVDKPNSIILAISPANQDIATSDAIKLARDVDPSGDRTFGVLTKLDLMDKG 254
Query: 436 TDARDVLENKLLPLRRGYIGVVNR 507
T+A DVLE + L+ ++G+VNR
Sbjct: 255 TNAVDVLEGRQYRLQHPWVGIVNR 278
Score = 34.3 bits (75), Expect = 0.082
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLG 614
Q DI+ D+ AA E+++F S P Y HLA ++G
Sbjct: 280 QADINRNVDMLAARRKEKEYFESSPDYGHLAHKMG 314
>03_02_0434 + 8403630-8405666
Length = 678
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = +2
Query: 83 EVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQPIDI 253
+V I A T + GS KGIS PI L V V +LTL+DLPG+T+VP+ QP DI
Sbjct: 134 KVADAINAATAEIAGSGKGISDAPITLVVRKRGVPDLTLVDLPGITRVPVQGQPDDI 190
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/83 (31%), Positives = 47/83 (56%)
Frame = +1
Query: 259 QIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGT 438
QI +I ++I + +IL V A D ++++++++VD G RT+ V+TK D EG
Sbjct: 193 QIAKIIKEYIAPKESIILNVLSATVDFPTCESIRMSQQVDRTGERTLAVVTKADKAPEGL 252
Query: 439 DARDVLENKLLPLRRGYIGVVNR 507
+ +++ + L GY+ V NR
Sbjct: 253 LEKVTMDDVNIGL--GYVCVRNR 273
>04_01_0166 - 1861750-1862181,1862317-1863873
Length = 662
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/57 (50%), Positives = 35/57 (61%)
Frame = +2
Query: 83 EVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGDQPIDI 253
EV I A T + G KGIS PI L V V +LTL+DLPG+T+VP+ QP DI
Sbjct: 99 EVADAINAATAEIAGCGKGISNAPITLVVRKKGVPDLTLVDLPGITRVPVKGQPEDI 155
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +1
Query: 259 QIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGT 438
QI G+I +I +IL V A D ++++++++VD G RT+ V+TK D EG
Sbjct: 158 QIAGIIKAYIAPRESIILNVLSATVDFPTCESIRMSQQVDRTGNRTLAVVTKSDKAPEGL 217
Query: 439 DARDVLENKLLPLRRGYIGVVNR 507
+ +++ + L GY+ V NR
Sbjct: 218 LEKVTVDDVRIGL--GYVCVRNR 238
>08_02_0721 +
20401217-20401360,20401689-20401809,20401969-20402067,
20402790-20402851,20403680-20403797,20404004-20404343,
20404435-20404582,20405043-20405144,20405240-20405359,
20405812-20405895,20405974-20406101,20408314-20408389,
20408556-20408631,20408800-20408876,20408975-20409031,
20409411-20409555,20409634-20409806,20409928-20410054,
20410090-20410192,20410492-20410688,20410946-20411097
Length = 882
Score = 51.2 bits (117), Expect = 7e-07
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +1
Query: 253 RQQIKGMIFQFIRRESCLILAVTPA--NTDLANSDALKLAKEVDPQGLRTIGVITKLDLM 426
R + MI + R ++L + PA D+A+S AL++A+E+D +G RTIGV++K+D +
Sbjct: 136 RSMDESMIGNYAARNDAILLVIVPALQAPDVASSRALRIARELDSEGSRTIGVVSKVDQV 195
Query: 427 DEGTDARDVLENKLLPLRRG 486
E D R +L + L + +G
Sbjct: 196 AE--DQRALLAVQALLVNQG 213
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +1
Query: 274 IFQFIRRESCLILAVTPAN--TDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDAR 447
I ++ +++ V PA D+A+S AL+LAK++DP G RTIGV++K+D DA+
Sbjct: 176 ISEYAGHNDAILIVVIPAMQAADVASSRALRLAKDIDPDGTRTIGVLSKID--QASADAK 233
Query: 448 DV 453
V
Sbjct: 234 TV 235
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +1
Query: 271 MIFQFIRRESCLILAVTPAN--TDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDA 444
MI ++ ++L V PA D+A+S AL+LAK++D G RT+GVI+K+D EG DA
Sbjct: 160 MINEYAGHNDAILLVVIPAMQAADVASSRALRLAKDIDADGTRTVGVISKVD-QAEG-DA 217
Query: 445 RDV 453
+ +
Sbjct: 218 KTI 220
>09_02_0586 + 10948079-10948283,10948506-10948615
Length = 104
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 267 RDDIPVHQTRIMPYPGSYSGQHGFGQQRCSEACQRSRPTRIAYY 398
+DD + ++PYPG Q G ++C + C R+ P + YY
Sbjct: 50 KDDSTACRVDVVPYPGH---QQGLALRQCGQ-CDRTGPPKYVYY 89
>12_02_0351 -
17829874-17830005,17830250-17830267,17830544-17830672,
17831037-17831336,17831447-17831675,17831762-17831989,
17832380-17832645
Length = 433
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 32 EYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNK----GISPVPINLRVY 172
+Y + LHC +FTD +++ E ++ S K GI+ +P+++ Y
Sbjct: 224 DYVDILHCHDIEFTDLDQIVNETIPVLQKIKESGKARFIGITGLPLSIYTY 274
>12_01_0503 -
3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 83 EVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGL 217
+++ IEAE R+ S I +R+ + NLT+ID PGL
Sbjct: 127 DIQAYIEAENMRLENDPSQFSEKEIIIRIEYKHCPNLTIIDTPGL 171
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 286 IRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLD 420
I+ + +IL + + D +N+ ++ +VDP RT+ V TKLD
Sbjct: 198 IKHKETIILCLEDCS-DWSNATTRRVVMQVDPDLARTVLVSTKLD 241
>07_03_1591 +
27967065-27967090,27967236-27968054,27984940-27985022,
27985590-27985744,27985956-27986461,27986551-27986703,
27987146-27987485,27987558-27987822,27987897-27988634,
27989734-27989779,27989849-27990223,27991511-27991567,
27991640-27992438
Length = 1453
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 309 PGSYSGQH-GFGQQRCSEACQRSRPTRIAYYRRNNKIR 419
P + SG H G + C +AC+ + P + YR ++K+R
Sbjct: 329 PSTPSGSHEGVDRPPCVQACEMNTPEKDRVYRHDSKLR 366
>07_01_0543 + 4008439-4008808,4009209-4009274,4009409-4009584
Length = 203
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = -3
Query: 159 LIGTGDIPLLEPVTRSVSASISPRTSLKSVNFFPLQCKNSAYSV 28
L+ TG++PL P+ R+++ ++ + SV PLQCK+++ +
Sbjct: 89 LVLTGNVPLGIPINRTLAVTLPKACNSMSV---PLQCKDTSAQI 129
>01_05_0691 + 24330491-24332269
Length = 592
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 184 HIRGINTQVNRYRRYTLVGTSNTICLRLDL 95
H G+ + YRR T+V T + IC+ L L
Sbjct: 458 HFAGLPYLIGMYRRATMVATGSGICVFLSL 487
>02_05_0840 -
32118332-32118376,32118420-32118531,32119074-32119196,
32119267-32119379,32119460-32119605,32120048-32120162,
32120360-32120473
Length = 255
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 382 QGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRC 510
Q L + K+D + G +A D+ E LL + RG I ++RC
Sbjct: 125 QALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARLSRC 167
>01_05_0597 -
23526705-23526749,23526794-23526905,23527068-23527134,
23527439-23527566,23527638-23527750,23527827-23527972,
23528419-23528525,23528667-23528873,23530878-23531129,
23531324-23531406
Length = 419
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 382 QGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRC 510
Q L + K+D + G +A D+ E LL + RG I ++RC
Sbjct: 265 QALDRGAALLKVDKIVTGHNADDIAETVLLNILRGDIARLSRC 307
>06_01_0094 +
779097-779155,779882-781019,781732-782115,782842-783060
Length = 599
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 159 LIGTGDIPLLEPVTRSVSASISPRTSLK 76
LI +GD+PL+ R ++S +P T +K
Sbjct: 423 LISSGDLPLISSAVRWTASSRTPSTPIK 450
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,762,119
Number of Sequences: 37544
Number of extensions: 332796
Number of successful extensions: 824
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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