Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20062
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 149 1e-36
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 149 1e-36
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 149 1e-36
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 149 1e-36
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 105 2e-23
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 105 2e-23
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 105 2e-23
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine r... 27 8.5
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 149 bits (362), Expect = 1e-36
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
QQI+ MI FI RE+CLILAVTPAN+DLA SDALKLAKEVDPQGLRTIGV+TKLDLMDEG
Sbjct: 156 QQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEG 215
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
TDAR++LENKL LRRGY+GVVNR +K +
Sbjct: 216 TDAREILENKLFTLRRGYVGVVNRGQKDI 244
Score = 135 bits (327), Expect = 2e-32
Identities = 64/81 (79%), Positives = 68/81 (83%)
Frame = +2
Query: 11 QLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLN 190
QLI EYAEFLH KG +F DF+ VR EIE ETDRVTG NKGISP PINLRV+SPNVLN
Sbjct: 74 QLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLN 133
Query: 191 LTLIDLPGLTKVPIGDQPIDI 253
LTLIDLPGLTKVP+GDQP DI
Sbjct: 134 LTLIDLPGLTKVPVGDQPADI 154
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
QKDI GRKDI AAL AERKFF+SHPSYRH+ADRLGT
Sbjct: 241 QKDIVGRKDIRAALDAERKFFISHPSYRHMADRLGT 276
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 149 bits (362), Expect = 1e-36
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
QQI+ MI FI RE+CLILAVTPAN+DLA SDALKLAKEVDPQGLRTIGV+TKLDLMDEG
Sbjct: 156 QQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEG 215
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
TDAR++LENKL LRRGY+GVVNR +K +
Sbjct: 216 TDAREILENKLFTLRRGYVGVVNRGQKDI 244
Score = 135 bits (327), Expect = 2e-32
Identities = 64/81 (79%), Positives = 68/81 (83%)
Frame = +2
Query: 11 QLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLN 190
QLI EYAEFLH KG +F DF+ VR EIE ETDRVTG NKGISP PINLRV+SPNVLN
Sbjct: 74 QLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLN 133
Query: 191 LTLIDLPGLTKVPIGDQPIDI 253
LTLIDLPGLTKVP+GDQP DI
Sbjct: 134 LTLIDLPGLTKVPVGDQPADI 154
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
QKDI GRKDI AAL AERKFF+SHPSYRH+ADRLGT
Sbjct: 241 QKDIVGRKDIRAALDAERKFFISHPSYRHMADRLGT 276
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 149 bits (362), Expect = 1e-36
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
QQI+ MI FI RE+CLILAVTPAN+DLA SDALKLAKEVDPQGLRTIGV+TKLDLMDEG
Sbjct: 156 QQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEG 215
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
TDAR++LENKL LRRGY+GVVNR +K +
Sbjct: 216 TDAREILENKLFTLRRGYVGVVNRGQKDI 244
Score = 135 bits (327), Expect = 2e-32
Identities = 64/81 (79%), Positives = 68/81 (83%)
Frame = +2
Query: 11 QLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLN 190
QLI EYAEFLH KG +F DF+ VR EIE ETDRVTG NKGISP PINLRV+SPNVLN
Sbjct: 74 QLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLN 133
Query: 191 LTLIDLPGLTKVPIGDQPIDI 253
LTLIDLPGLTKVP+GDQP DI
Sbjct: 134 LTLIDLPGLTKVPVGDQPADI 154
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
QKDI GRKDI AAL AERKFF+SHPSYRH+ADRLGT
Sbjct: 241 QKDIVGRKDIRAALDAERKFFISHPSYRHMADRLGT 276
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 149 bits (362), Expect = 1e-36
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
QQI+ MI FI RE+CLILAVTPAN+DLA SDALKLAKEVDPQGLRTIGV+TKLDLMDEG
Sbjct: 156 QQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEG 215
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
TDAR++LENKL LRRGY+GVVNR +K +
Sbjct: 216 TDAREILENKLFTLRRGYVGVVNRGQKDI 244
Score = 135 bits (327), Expect = 2e-32
Identities = 64/81 (79%), Positives = 68/81 (83%)
Frame = +2
Query: 11 QLINGNTEYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLN 190
QLI EYAEFLH KG +F DF+ VR EIE ETDRVTG NKGISP PINLRV+SPNVLN
Sbjct: 74 QLIQDRNEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLN 133
Query: 191 LTLIDLPGLTKVPIGDQPIDI 253
LTLIDLPGLTKVP+GDQP DI
Sbjct: 134 LTLIDLPGLTKVPVGDQPADI 154
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3
Query: 510 QKDIDGRKDIAAALAAERKFFLSHPSYRHLADRLGT 617
QKDI GRKDI AAL AERKFF+SHPSYRH+ADRLGT
Sbjct: 241 QKDIVGRKDIRAALDAERKFFISHPSYRHMADRLGT 276
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 105 bits (253), Expect = 2e-23
Identities = 50/89 (56%), Positives = 67/89 (75%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+QI+ MI +I S +ILAVTPAN D A S+ +KLA+EVD G RT+ V+TKLDLMD+G
Sbjct: 166 EQIREMILLYISNPSSIILAVTPANQDFATSEPIKLAREVDAGGQRTLAVLTKLDLMDQG 225
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
TDA DVL K++P++ G IGVVNR ++ +
Sbjct: 226 TDAMDVLMGKVIPVKLGIIGVVNRSQQNI 254
Score = 102 bits (244), Expect = 2e-22
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = +2
Query: 32 EYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLP 211
++A F H K FTDF+ VR EIE ETDRVTG NKGIS +PI+L++YS V++L+L+DLP
Sbjct: 91 DWAMFEHTGSKVFTDFDAVRKEIEDETDRVTGVNKGISLLPISLKIYSHRVVSLSLVDLP 150
Query: 212 GLTKVPIGDQPIDI 253
G+TK+P+GDQP++I
Sbjct: 151 GITKIPVGDQPVNI 164
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 105 bits (253), Expect = 2e-23
Identities = 50/89 (56%), Positives = 67/89 (75%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+QI+ MI +I S +ILAVTPAN D A S+ +KLA+EVD G RT+ V+TKLDLMD+G
Sbjct: 166 EQIREMILLYISNPSSIILAVTPANQDFATSEPIKLAREVDAGGQRTLAVLTKLDLMDQG 225
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
TDA DVL K++P++ G IGVVNR ++ +
Sbjct: 226 TDAMDVLMGKVIPVKLGIIGVVNRSQQNI 254
Score = 102 bits (244), Expect = 2e-22
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = +2
Query: 32 EYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLP 211
++A F H K FTDF+ VR EIE ETDRVTG NKGIS +PI+L++YS V++L+L+DLP
Sbjct: 91 DWAMFEHTGSKVFTDFDAVRKEIEDETDRVTGVNKGISLLPISLKIYSHRVVSLSLVDLP 150
Query: 212 GLTKVPIGDQPIDI 253
G+TK+P+GDQP++I
Sbjct: 151 GITKIPVGDQPVNI 164
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 105 bits (253), Expect = 2e-23
Identities = 50/89 (56%), Positives = 67/89 (75%)
Frame = +1
Query: 256 QQIKGMIFQFIRRESCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEG 435
+QI+ MI +I S +ILAVTPAN D A S+ +KLA+EVD G RT+ V+TKLDLMD+G
Sbjct: 166 EQIREMILLYISNPSSIILAVTPANQDFATSEPIKLAREVDAGGQRTLAVLTKLDLMDQG 225
Query: 436 TDARDVLENKLLPLRRGYIGVVNRCRKTL 522
TDA DVL K++P++ G IGVVNR ++ +
Sbjct: 226 TDAMDVLMGKVIPVKLGIIGVVNRSQQNI 254
Score = 102 bits (244), Expect = 2e-22
Identities = 45/74 (60%), Positives = 61/74 (82%)
Frame = +2
Query: 32 EYAEFLHCKGKKFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLP 211
++A F H K FTDF+ VR EIE ETDRVTG NKGIS +PI+L++YS V++L+L+DLP
Sbjct: 91 DWAMFEHTGSKVFTDFDAVRKEIEDETDRVTGVNKGISLLPISLKIYSHRVVSLSLVDLP 150
Query: 212 GLTKVPIGDQPIDI 253
G+TK+P+GDQP++I
Sbjct: 151 GITKIPVGDQPVNI 164
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = +1
Query: 298 SCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARD----VLENK 465
+ +IL + + D S+ L +DP G RTI V+TK+D+ ++ D +LE K
Sbjct: 429 NAIILCIQDGSVDAERSNVTDLVSSIDPSGKRTILVLTKVDMAEKNLANPDRIKKILEGK 488
Query: 466 LLPLRR-GYIGVV 501
L P++ GY GVV
Sbjct: 489 LFPMKALGYFGVV 501
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 65 KFTDFNEVRGEIEAETDRVTGSNKGISPVPINLRVYSPNVLNLTLIDLPGLTKVPIGD 238
K TD ++R E E K +S I+L V PN+ + L+DLPG+ D
Sbjct: 351 KETDLQQLRNETEVRMRNSVRDGKTVSNEVISLTVKGPNLPRMVLVDLPGVISTVTAD 408
>Z75549-1|CAA99917.1| 424|Caenorhabditis elegans Hypothetical
protein T19C4.1 protein.
Length = 424
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 401 PIVRNPCGSTSLASFRASLLA-KSVLAGVTARIRHDSRLMNWNIIPLICC 255
P + +P + + +F +L K VTA++ + +NWN+I ++CC
Sbjct: 216 PSMGHPVPLSQMGAFVPPMLEQKPSPRAVTAQLAIRTPYLNWNMISIVCC 265
>AF068709-17|AAC19257.2| 287|Caenorhabditis elegans Serpentine
receptor, class x protein24 protein.
Length = 287
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = -1
Query: 368 LASFRASLLAKSVLAGVTARIRHDSRLMNWNIIPLICCRYL 246
LA+++ L++++L + R WN + CC+ L
Sbjct: 189 LAAYKGRKLSRALLGAAGLEVSEVQRKREWNFVKQTCCQGL 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,150,814
Number of Sequences: 27780
Number of extensions: 278236
Number of successful extensions: 840
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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