Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20057
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 29 1.8
AF100656-2|AAF99970.1| 196|Caenorhabditis elegans Hypothetical ... 29 1.8
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 28 4.1
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 28 4.1
U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 27 7.2
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 27 7.2
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 27 7.2
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 27 9.5
U00054-1|AAA50716.1| 91|Caenorhabditis elegans Hypothetical pr... 27 9.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 27 9.5
AL132952-8|CAB61142.2| 186|Caenorhabditis elegans Hypothetical ... 27 9.5
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 27 9.5
AF038623-8|AAB94160.2| 631|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 288 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 449
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 288 ENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 449
E +RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 373 EQARYQRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>AF100656-2|AAF99970.1| 196|Caenorhabditis elegans Hypothetical
protein F49F1.3 protein.
Length = 196
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 242 ISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSLDKLSTTFKGLSSASGTLSGMAG 63
+S TL +S ++ F LL + + +LA ++ L F G+ G++ G+AG
Sbjct: 25 LSRKATLYPLSYSTKNFLTLLL-VFVALLAVTVVEAGDPDLGGIFSGIGGMLGSIGGLAG 83
Query: 62 CACG--EHEYS*QQGRV*F 12
G +HE ++GR+ F
Sbjct: 84 AGGGKKKHEARIEEGRIYF 102
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 QPAIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIK-DIDNSLRANKKEVID 213
+P+ P KVP A K + S+QEL ++ + D+ ++L +NKKE+ID
Sbjct: 489 KPSQPAKVPAAPIKAPRL-----SDQELESESQKLALDVISNLFSNKKEIID 535
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 288 ENEEIKRPLVDLRNPGPPQHQEHETQNPE 374
EN+ + V+ + P P QHQ+ + Q PE
Sbjct: 404 ENQRYEGNFVEYQPPPPQQHQQQQPQAPE 432
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 333 GPPQHQEHETQNPEHHEDAEKIVSSVKN 416
GPP HQ+H Q +H+ A SS N
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN 160
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 22 RPCC*LYSCSPHAQPAIPDKVPEAEDKPL 108
+PCC + P + A+P +P AED PL
Sbjct: 557 KPCCSQAALPPSSIVALPPAMPLAEDGPL 585
>U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical
protein C46A5.6 protein.
Length = 316
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 442 FVK-ASRKCQTVLENGTLVPSKLRAPGQLATFPRKFRRSDTKV 567
F+K A R+ TVLE T P+K QL+ RKF+R+DT+V
Sbjct: 66 FLKVAKRRSSTVLETAT--PAKTPKI-QLSERRRKFQRNDTEV 105
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 245 LISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSL 129
LI+ T+T G +T FL +R++ +L S CSL
Sbjct: 45 LINITLTNVGACVTGFLLDQRIIQSGKSMLYVSYGYCSL 83
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 61 QPAIPDKVPEAEDKPLNVVDNLSS-EQELIDQANTIKDIDNSLRANKKE 204
+ + +++ ED+ L + + L E+EL+D+ N K++D + +E
Sbjct: 1248 EKVLNNRILSLEDQNLELEERLQEMEEELLDEKNKKKEVDAKVEQKSEE 1296
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 330 PGPPQHQEHETQNPEHH 380
P PPQ Q + Q+P HH
Sbjct: 469 PPPPQQQHQQQQHPPHH 485
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 330 PGPPQHQEHETQNPEHH 380
P PPQ Q + Q+P HH
Sbjct: 794 PPPPQQQHQQQQHPPHH 810
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 330 PGPPQHQEHETQNPEHH 380
P PPQ Q + Q+P HH
Sbjct: 794 PPPPQQQHQQQQHPPHH 810
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +3
Query: 342 QHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQIKSSRP 521
+HQ+HE Q + E+AEK + +K D+ EI + V + + K R E +
Sbjct: 567 EHQKHEDQT-DKSEEAEKKM-KIKADLAAKEIWDKNMEHNVDEILMKRVNRVEMCRIQMA 624
Query: 522 ACNISKKI 545
N+ +K+
Sbjct: 625 LQNLDQKL 632
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 270 NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 407
NV E ++I P+ + P P + + + P H E + +V S
Sbjct: 474 NVSGGSEEDKIPEPVDAFKKPDPVELDDFDPLKPSHPEPSAPVVPS 519
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 270 NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSS 407
NV E ++I P+ + P P + + + P H E + +V S
Sbjct: 474 NVSGGSEEDKIPEPVDAFKKPDPVELDDFDPLKPSHPEPSAPVVPS 519
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 PDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD-IDNSLRANKKEVIDIPVKVIVEEI 243
P+K ED+ +++ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 PDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD-IDNSLRANKKEVIDIPVKVIVEEI 243
P+K ED+ +++ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>U00054-1|AAA50716.1| 91|Caenorhabditis elegans Hypothetical
protein K07E12.2 protein.
Length = 91
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 456 QEVSDGIGKWYARTEQIKSSRPACNISKKI 545
+++S+G GKW+ E KS++ SKKI
Sbjct: 18 KKLSEGRGKWFKGVETRKSNKEKKKNSKKI 47
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 PDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD-IDNSLRANKKEVIDIPVKVIVEEI 243
P+K ED+ +++ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>AL132952-8|CAB61142.2| 186|Caenorhabditis elegans Hypothetical
protein Y51H4A.8 protein.
Length = 186
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 27 LLLTIFVLAARAACHPGQGPRGRR*TF 107
LLL F ++ AC PG G G + TF
Sbjct: 5 LLLLCFFISTAGACAPGTGTLGSKGTF 31
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 73 PDKVPEAEDKPLNVVDNLSSEQELIDQANTIKD-IDNSLRANKKEVIDIPVKVIVEEI 243
P+K ED+ +++ S + +L Q TI++ +D+ +R K + D+ K ++ I
Sbjct: 626 PEKQKAQEDESQQEMEDTSIDPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLI 683
>AF038623-8|AAB94160.2| 631|Caenorhabditis elegans Hypothetical
protein T08B6.4 protein.
Length = 631
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/84 (20%), Positives = 35/84 (41%)
Frame = +3
Query: 270 NVEVPDENEEIKRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 449
N+ D N+++K V+ NP P+ + + P + + I+ + + R
Sbjct: 160 NMTGKDSNKDVKDVDVEAANPENPETNICKDKRPGYSQKTGAILFANEGKCLEMHKLGRD 219
Query: 450 GFQEVSDGIGKWYARTEQIKSSRP 521
+ E + +W E +K+ RP
Sbjct: 220 KYSEEYIQVPRWLQPGESVKNIRP 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,097,223
Number of Sequences: 27780
Number of extensions: 211885
Number of successful extensions: 1135
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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