Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20055
(759 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 155 5e-39
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 152 5e-38
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 140 3e-34
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 140 3e-34
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 132 7e-32
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 71 2e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 58 1e-09
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 29 0.54
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 29 0.54
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.95
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.9
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 155 bits (377), Expect = 5e-39
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTF
Sbjct: 144 VPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTF 203
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
DVS+LTIE+GIFEVK+TAGDTH G
Sbjct: 204 DVSLLTIEEGIFEVKATAGDTHLG 227
Score = 138 bits (333), Expect = 1e-33
Identities = 62/87 (71%), Positives = 74/87 (85%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 433
+NP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+S
Sbjct: 59 MNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEIS 118
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
SMVL KM+ETAEAYLG V +AV+T P
Sbjct: 119 SMVLMKMRETAEAYLGGKVTDAVVTVP 145
Score = 106 bits (254), Expect = 4e-24
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +3
Query: 90 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 263
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 152 bits (369), Expect = 5e-38
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTF
Sbjct: 144 VPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTF 203
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
DVS+LTIE+GIFEVK+TAGDTH G
Sbjct: 204 DVSLLTIEEGIFEVKATAGDTHLG 227
Score = 130 bits (314), Expect = 2e-31
Identities = 58/87 (66%), Positives = 72/87 (82%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 433
+NP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+S
Sbjct: 59 MNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEIS 118
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
SMVL KM+E+AEA+LG V +AV+T P
Sbjct: 119 SMVLLKMRESAEAFLGGKVTDAVVTVP 145
Score = 106 bits (254), Expect = 4e-24
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +3
Query: 90 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 263
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 61
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 140 bits (338), Expect = 3e-34
Identities = 62/84 (73%), Positives = 79/84 (94%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTF
Sbjct: 177 VPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTF 235
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
DVS+L+I++G+FEV +T+GDTH G
Sbjct: 236 DVSLLSIDNGVFEVLATSGDTHLG 259
Score = 111 bits (267), Expect = 1e-25
Identities = 49/86 (56%), Positives = 67/86 (77%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSS 436
NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+
Sbjct: 93 NPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISA 152
Query: 437 MVLTKMKETAEAYLGKTVQNAVITFP 514
M+L+KMK+TAEAYLGK V +AV+T P
Sbjct: 153 MILSKMKQTAEAYLGKPVTHAVVTVP 178
Score = 94.7 bits (225), Expect = 1e-20
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 263
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ P
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNP 94
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 140 bits (338), Expect = 3e-34
Identities = 66/84 (78%), Positives = 73/84 (86%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTF
Sbjct: 148 VPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTF 207
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
DVS+L I+ G+FEV +TAGDTH G
Sbjct: 208 DVSLLKIQGGVFEVLATAGDTHLG 231
Score = 116 bits (279), Expect = 4e-27
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 433
+NP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S
Sbjct: 63 MNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEIS 122
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
+MVLTKMKE +EA L K V+ AVIT P
Sbjct: 123 AMVLTKMKEISEAKLNKRVEKAVITVP 149
Score = 94.3 bits (224), Expect = 2e-20
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +3
Query: 90 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TP 263
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ A P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNP 65
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 132 bits (318), Expect = 7e-32
Identities = 61/84 (72%), Positives = 72/84 (85%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 687
VPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTF
Sbjct: 190 VPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTF 247
Query: 688 DVSILTIEDGIFEVKSTAGDTHFG 759
D+SIL + +G+FEV+ST GDTH G
Sbjct: 248 DISILELNNGVFEVRSTNGDTHLG 271
Score = 81.4 bits (192), Expect = 1e-16
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = +2
Query: 254 VNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 433
+NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 108 INPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIG 164
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
+L+KM+ETA YLGK V+NAV+T P
Sbjct: 165 GFILSKMRETASTYLGKDVKNAVVTVP 191
Score = 68.9 bits (161), Expect = 7e-13
Identities = 33/66 (50%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 81 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA* 257
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 258 TPTTQY 275
P +
Sbjct: 109 NPENTF 114
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 70.9 bits (166), Expect = 2e-13
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +1
Query: 508 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLG 675
+PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G
Sbjct: 148 IPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFG 207
Query: 676 GGTFDVSILTIEDGIFEVKSTAGDTHFG 759
+ VSI+ G F +KST D + G
Sbjct: 208 HSNYSVSIVEFSRGQFHIKSTVCDRNLG 235
Score = 49.2 bits (112), Expect = 6e-07
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +3
Query: 78 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 254
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEA 61
Score = 39.9 bits (89), Expect = 4e-04
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 433
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 434 SMVLTKMKETAEAYLGKTVQNAVITFP 514
+ TK+K AEA L +V + VI+ P
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVVISIP 149
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 58.0 bits (134), Expect = 1e-09
Identities = 25/88 (28%), Positives = 52/88 (59%)
Frame = +1
Query: 496 CSYHVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLG 675
C VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ + G
Sbjct: 166 CVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFG 225
Query: 676 GGTFDVSILTIEDGIFEVKSTAGDTHFG 759
+VS+++++ G+ + ++ D + G
Sbjct: 226 ATRSEVSVVSVKGGLMTILASVHDENLG 253
Score = 39.5 bits (88), Expect = 5e-04
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 251
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQL 79
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.5 bits (63), Expect = 0.54
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 93 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA*TPTT 269
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 270 QYSMPNV 290
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 29.5 bits (63), Expect = 0.54
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -1
Query: 171 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARLTLVP 1
G W SP S + H ++++ +F +RVL C+ L K +K+A L ++P
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCMI-----LIWKSFAKQALLAVLP 327
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.95
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 85 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 180
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.9
Identities = 28/126 (22%), Positives = 52/126 (41%)
Frame = -1
Query: 681 TAAEVKDKYISFSSTLFVKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEVRGNVI 502
+++ + + S SS L T S S+S I S + F S + I
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSASTSSPSSISSSI 618
Query: 501 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSAC 322
++ T+L + S + +S+ + S +LSS + + + SL+T S+
Sbjct: 619 SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSIST---IPISSSLSTYSSSVIPSSS 675
Query: 321 TVASSN 304
T+ SS+
Sbjct: 676 TLVSSS 681
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 263 WGSRHLVLGGISDETLGVCERNIRRSGPVALVVGD-DLHLPVLEDTNARVR 114
WGS +G + TLG+ + + + L+VGD LHL V ++ +A +R
Sbjct: 418 WGSIGWSVGAMFGATLGIKDSDAPHRRSI-LIVGDGSLHLTV-QEISATIR 466
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,369,594
Number of Sequences: 5004
Number of extensions: 73739
Number of successful extensions: 277
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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