BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20053 (739 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 29 0.69 SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 26 4.9 >SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Schizosaccharomyces pombe|chr 3|||Manual Length = 830 Score = 29.1 bits (62), Expect = 0.69 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +2 Query: 35 KRRWTKLYEDIRVKSVTCRKLKKKKTNILVSIEDVSFPSKILKKTSFSHSVDVLSCVK 208 K + T+ I +KSV +KL KK +E++ ILK+ H V+++ C+K Sbjct: 30 KGKHTETNRVISIKSVLTKKLTKKL------LENLESEISILKEIRHVHVVELIDCIK 81 >SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccharomyces pombe|chr 3|||Manual Length = 338 Score = 26.2 bits (55), Expect = 4.9 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -2 Query: 180 CEKDVFLSILDGKDTSSIDTKILVFFFFNLRHVTDLTLMSSYNLVHRL 37 CE+ VF + G I + FF+ T LMS+YNL L Sbjct: 64 CEEGVFHGLYSGVCPMLIGSLPATALFFSSYEYTKRHLMSNYNLPETL 111 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,686,477 Number of Sequences: 5004 Number of extensions: 51900 Number of successful extensions: 106 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 106 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 349251756 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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