Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20048
(771 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 25 0.51
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 24 1.2
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 24 1.2
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 1.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 1.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 1.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 1.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 1.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 1.2
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 24 1.5
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 24 1.5
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 25.4 bits (53), Expect = 0.51
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 9 GLRGGGSSKPPEPALQSKP 65
GL+ GSS+ +PA +SKP
Sbjct: 240 GLQSSGSSRSHQPATKSKP 258
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 188 CGHSSPGCSSLIRGELRTTVRAAKNNTT 105
C SPGC SL RG+ K TT
Sbjct: 223 CVLCSPGCFSLFRGKALMDKSVMKKYTT 250
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 188 CGHSSPGCSSLIRGELRTTVRAAKNNTT 105
C SPGC SL RG+ K TT
Sbjct: 537 CVLCSPGCFSLFRGKALMDKSVMKKYTT 564
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 188 CGHSSPGCSSLIRGELRTTVRAAKNNTT 105
C SPGC SL RG+ K TT
Sbjct: 797 CVLCSPGCFSLFRGKALMDDNVMKKYTT 824
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 188 CGHSSPGCSSLIRGELRTTVRAAKNNTT 105
C SPGC SL RG+ K TT
Sbjct: 797 CVLCSPGCFSLFRGKALMDDNVMKKYTT 824
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 188 CGHSSPGCSSLIRGELRTTVRAAKNNTT 105
C SPGC SL RG+ K TT
Sbjct: 770 CVLCSPGCFSLFRGKALMDKSVMKKYTT 797
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 188 CGHSSPGCSSLIRGELRTTVRAAKNNTT 105
C SPGC SL RG+ K TT
Sbjct: 770 CVLCSPGCFSLFRGKALMDKSVMKKYTT 797
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 188 CGHSSPGCSSLIRGELRTTVRAAKNNTT 105
C SPGC SL RG+ K TT
Sbjct: 797 CVLCSPGCFSLFRGKALMDDNVMKKYTT 824
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 188 CGHSSPGCSSLIRGELRTTVRAAKNNTT 105
C SPGC SL RG+ K TT
Sbjct: 797 CVLCSPGCFSLFRGKALMDDNVMKKYTT 824
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 678 TWQNLSFYHQCEINRKSFE 734
TW +LS YH EI+ F+
Sbjct: 197 TWTSLSVYHLVEISEIHFD 215
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 678 TWQNLSFYHQCEINRKSFE 734
TW +LS YH EI+ F+
Sbjct: 193 TWTSLSVYHLVEISEIHFD 211
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,637
Number of Sequences: 336
Number of extensions: 3427
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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