Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20045
(722 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 23 1.9
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 23 2.5
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 4.4
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.6
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 7.6
DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein. 21 7.6
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 21 7.6
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 21 7.6
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 21 7.6
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 23.4 bits (48), Expect = 1.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -1
Query: 236 VCAGVAEQHGYKFTFMNFFKIGFPIMIGHLVVASLYLII 120
+ A V E+ FT FF + + G L + YLI+
Sbjct: 328 MAAQVIEKSVANFTAAGFFDVKRSTLFGILATTTTYLIV 366
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 215 QHGYKFTFMNFFKIGFPIMIGHLVVASLYLII 120
QH KF+ NFF I ++ L A +LII
Sbjct: 315 QHLPKFSAANFFDIERSTILSVLGTACTFLII 346
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +2
Query: 572 GNTVEVSTTF--CHVPSGFGMSSPSRYFPSAMTCPSSNEA 685
G T + TT CH P G+ Y T P N+A
Sbjct: 73 GATCQDHTTHYTCHCPYGYTGKDCGEYVDWCSTNPCENQA 112
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/42 (21%), Positives = 19/42 (45%)
Frame = +1
Query: 28 TDDLEVSL*IRFQQLSPNTVRDQCQAKTQWHIIRYSEATTKW 153
++ LEV + QQ+ ++Q W + +++ KW
Sbjct: 26 SEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKW 67
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/42 (21%), Positives = 19/42 (45%)
Frame = +1
Query: 28 TDDLEVSL*IRFQQLSPNTVRDQCQAKTQWHIIRYSEATTKW 153
++ LEV + QQ+ ++Q W + +++ KW
Sbjct: 26 SEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKW 67
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/42 (21%), Positives = 19/42 (45%)
Frame = +1
Query: 28 TDDLEVSL*IRFQQLSPNTVRDQCQAKTQWHIIRYSEATTKW 153
++ LEV + QQ+ ++Q W + +++ KW
Sbjct: 26 SEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLKW 67
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 577 YCGGFYHILPRTIRLWNELP 636
YCG +++ R +R +LP
Sbjct: 389 YCGKIFNLTTRQVRTLYKLP 408
>DQ138189-1|ABA03053.1| 162|Tribolium castaneum bursicon protein.
Length = 162
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +1
Query: 67 QLSPNTVRDQCQAKTQWHIIRYSEATTK 150
Q+S + D+CQ H+++Y K
Sbjct: 31 QVSGASTTDECQVTPVIHVLQYPGCVPK 58
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 203 KFTFMNFFKIGFPIMIGHLVVASLYLII 120
KFT +FF+I G L + Y II
Sbjct: 276 KFTAADFFEIDRGTFFGILSTTTSYFII 303
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 206 YKFTFMNFFKIGFPIMIGHLVVASLYLIICH 114
Y+ +MN G +++ +L+ SLYL H
Sbjct: 52 YERRYMNAHLSGIQLVVRNLLDISLYLNAYH 82
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 383 MSMGSGNA*HQVGCELVHPTKK*KTLKRYRPN 288
+ + SG+ GC +V T K L+ Y PN
Sbjct: 73 LKLASGDYTVPAGCTVVIGTFKVHRLEEYYPN 104
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,026
Number of Sequences: 336
Number of extensions: 4437
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -