Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20045
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    28   0.34 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   5.5  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   9.6  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 256  SGYRYLVRRARLGLYRFNVFYFLVGWTSSQPTWC*ALPEPIDIYD 390
            SG+ + +R+   GL RF+ FY+L+   SS  T+   L +  D Y+
Sbjct: 918  SGFFFHLRKNMGGLKRFSTFYYLI---SSMETFFDLLDKQYDSYN 959


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 30  GRPGSESLNPLPAVKS*YGQRSMPGK 107
           G PG++ L  LP  +   G R  PG+
Sbjct: 229 GEPGNDGLEGLPGPQGEVGPRGFPGR 254


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 30  GRPGSESLNPLPAVKS*YGQRSMPGKNAV 116
           G PG E +  LP +    G R +PG + +
Sbjct: 666 GMPGLEGVAGLPGMVGEKGDRGLPGMSGL 694


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 481 MTSENDRHCHLD 516
           +  END+ CHLD
Sbjct: 291 IVEENDKQCHLD 302


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,601
Number of Sequences: 2352
Number of extensions: 16887
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)