Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20037
(718 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 152 4e-38
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 151 1e-37
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 134 2e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 106 3e-24
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 101 1e-22
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 72 1e-13
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 68 1e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 60 2e-10
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.88
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.7
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 27 3.5
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.7
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 4.7
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 6.2
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 8.2
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 8.2
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 152 bits (369), Expect = 4e-38
Identities = 73/89 (82%), Positives = 81/89 (91%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA
Sbjct: 269 KRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKAS 328
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
+++IVLVGGSTRIP+VQKL+ DFFNGKEP
Sbjct: 329 VNEIVLVGGSTRIPRVQKLVSDFFNGKEP 357
Score = 150 bits (364), Expect = 2e-37
Identities = 68/80 (85%), Positives = 76/80 (95%)
Frame = +2
Query: 14 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 193
NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+
Sbjct: 192 NVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDI 251
Query: 194 ATNKRALRRLRTACERAKRT 253
N RA+RRLRTACERAKRT
Sbjct: 252 TGNARAVRRLRTACERAKRT 271
Score = 70.5 bits (165), Expect = 2e-13
Identities = 36/68 (52%), Positives = 41/68 (60%)
Frame = +3
Query: 513 KSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTI 692
KSINPDE +L GD SE+ QD GIETAGGVMT LIKRNTTI
Sbjct: 359 KSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTI 418
Query: 693 PTKQTQTF 716
PTK+++ F
Sbjct: 419 PTKKSEIF 426
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 151 bits (366), Expect = 1e-37
Identities = 71/89 (79%), Positives = 82/89 (92%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+
Sbjct: 269 KRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSS 328
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
+++IVLVGGSTRIP++QKL+ DFFNGKEP
Sbjct: 329 VNEIVLVGGSTRIPRIQKLVSDFFNGKEP 357
Score = 149 bits (361), Expect = 4e-37
Identities = 68/80 (85%), Positives = 75/80 (93%)
Frame = +2
Query: 14 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 193
NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+
Sbjct: 192 NVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDI 251
Query: 194 ATNKRALRRLRTACERAKRT 253
N RA+RRLRTACERAKRT
Sbjct: 252 TGNARAVRRLRTACERAKRT 271
Score = 70.9 bits (166), Expect = 2e-13
Identities = 37/68 (54%), Positives = 41/68 (60%)
Frame = +3
Query: 513 KSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTI 692
KSINPDE IL GD SE+ QD GIETAGGVMT LIKRNTTI
Sbjct: 359 KSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTI 418
Query: 693 PTKQTQTF 716
PTK+++ F
Sbjct: 419 PTKKSEVF 426
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 134 bits (323), Expect = 2e-32
Identities = 60/80 (75%), Positives = 71/80 (88%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
+NVLIFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D
Sbjct: 195 KNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKID 254
Query: 191 LATNKRALRRLRTACERAKR 250
++ + RALRRLR+ACERAKR
Sbjct: 255 ISDDPRALRRLRSACERAKR 274
Score = 122 bits (293), Expect = 7e-29
Identities = 55/87 (63%), Positives = 73/87 (83%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA
Sbjct: 273 KRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKAD 332
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGK 504
+HDIVLVGGSTRIPKVQ+L+ DFF+G+
Sbjct: 333 VHDIVLVGGSTRIPKVQRLVSDFFDGR 359
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDK-SEEVQDXXXXXXXXXXXGIETAGGVMTTLIK 677
+ NKSINPDE +L S++ QD G+ G V +
Sbjct: 359 RALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCP 418
Query: 678 RNTTIPTKQTQTF 716
RNT IPT + +TF
Sbjct: 419 RNTPIPTIKKRTF 431
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 106 bits (255), Expect = 3e-24
Identities = 49/89 (55%), Positives = 67/89 (75%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 417
+ K LSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K
Sbjct: 299 KAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKK 358
Query: 418 AQIHDIVLVGGSTRIPKVQKLLQDFFNGK 504
++I DIVLVGGSTRIPKVQ+LL+ FF K
Sbjct: 359 SEIDDIVLVGGSTRIPKVQELLESFFGKK 387
Score = 105 bits (252), Expect = 6e-24
Identities = 42/83 (50%), Positives = 67/83 (80%)
Frame = +2
Query: 5 TRRNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 184
T ++++++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + + RK
Sbjct: 221 TEKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNN 280
Query: 185 KDLATNKRALRRLRTACERAKRT 253
D+ + +A+ +L+ E+AKRT
Sbjct: 281 VDVTKDLKAMGKLKREVEKAKRT 303
Score = 52.4 bits (120), Expect = 6e-08
Identities = 29/72 (40%), Positives = 38/72 (52%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K A+K INPDE +L G++ + + GIET GGVMT LI R
Sbjct: 386 KKASKGINPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGR 443
Query: 681 NTTIPTKQTQTF 716
NT IPT+++Q F
Sbjct: 444 NTPIPTRKSQIF 455
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 101 bits (241), Expect = 1e-22
Identities = 44/77 (57%), Positives = 60/77 (77%)
Frame = +2
Query: 17 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 196
V +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H V+ FK+ DL+
Sbjct: 237 VAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLS 296
Query: 197 TNKRALRRLRTACERAK 247
++ A++R+R A E+AK
Sbjct: 297 KDRLAVQRIREAAEKAK 313
Score = 58.4 bits (135), Expect = 9e-10
Identities = 25/63 (39%), Positives = 47/63 (74%)
Frame = +1
Query: 322 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 501
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK- 401
Query: 502 KEP 510
+EP
Sbjct: 402 REP 404
Score = 52.0 bits (119), Expect = 8e-08
Identities = 29/68 (42%), Positives = 35/68 (51%)
Frame = +3
Query: 513 KSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTI 692
KS+NPDE +L G V+D GIET GGV T LI RNTTI
Sbjct: 406 KSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTI 461
Query: 693 PTKQTQTF 716
PT+++Q F
Sbjct: 462 PTRKSQVF 469
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 71.7 bits (168), Expect = 1e-13
Identities = 34/80 (42%), Positives = 47/80 (58%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
R V I D G + VSI+ G F +KST D +LG + D ++++F EFK KYK D
Sbjct: 199 RRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKID 258
Query: 191 LATNKRALRRLRTACERAKR 250
+ +N +A RL TA ER K+
Sbjct: 259 VLSNPKATFRLATAVERLKK 278
Score = 58.4 bits (135), Expect = 9e-10
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L A + K
Sbjct: 277 KKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKED 336
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFF 495
++ I +VGG TR+P V++++ ++F
Sbjct: 337 LYSIEMVGGCTRVPIVKEVIANYF 360
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 68.1 bits (159), Expect = 1e-12
Identities = 32/83 (38%), Positives = 54/83 (65%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A + ++
Sbjct: 305 KHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSE 364
Query: 424 IHDIVLVGGSTRIPKVQKLLQDF 492
I+ I+L GG++RIP +Q L D+
Sbjct: 365 INSIILFGGASRIPFIQSTLADY 387
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 60.5 bits (140), Expect = 2e-10
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LS+ T AS +DSL +GIDF++SI R R++ + + V +++ A M+
Sbjct: 295 KRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFD 354
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFF 495
I +++L GG++ PK+ L++ F
Sbjct: 355 ISEVILAGGASNTPKLTSLMESIF 378
Score = 58.8 bits (136), Expect = 7e-10
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
+ V++ + G +VS+++++ G+ + ++ D +LGGE + +VN F +EF++K D
Sbjct: 217 KTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGID 276
Query: 191 LATNKRALRRLRTACERAKR 250
N R+L +LR CE KR
Sbjct: 277 PRKNARSLAKLRAQCEITKR 296
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 0.88
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 135 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 25
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 2.7
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -3
Query: 446 PTSTISWI*ALSILASRRDFSTGSMVDLNRSAFSSSKRARVIDV*KSIPSKRESISMLAC 267
PTS+ S I + S S FS+ + + S+FSS+ + ++ S S S A
Sbjct: 336 PTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPAS 395
Query: 266 VDDDRSSLPSH 234
SSL SH
Sbjct: 396 SSSHSSSLSSH 406
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 286 LSQCSLVWTMTGPLCPLTCSTQTPKSSL 203
+S C ++WTM+G P S +T +S+
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETANASV 292
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 430 RGFEPYPSWHHGETSPLAP 374
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 171 LNSWTKWLTMRLSKSSPPKWVSPAVDF 91
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 6.2
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 289 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 447
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +2
Query: 356 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 445
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 8.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 39 AVPSTCPSLPSRMVSSR*NPPPATPTW 119
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,993,346
Number of Sequences: 5004
Number of extensions: 62458
Number of successful extensions: 261
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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