Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20037
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 161 3e-40
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 158 4e-39
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 141 4e-34
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 141 4e-34
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 141 5e-34
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 126 2e-29
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 122 3e-28
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 122 3e-28
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 102 2e-22
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 102 2e-22
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 91 7e-19
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 91 7e-19
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 72 4e-13
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 60 1e-09
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 54 1e-07
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 50 1e-06
AF101318-8|AAC69343.2| 342|Caenorhabditis elegans Hypothetical ... 33 0.20
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 30 1.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC006648-4|AAF39852.2| 71|Caenorhabditis elegans Hypothetical ... 30 1.9
Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical pr... 29 3.3
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 29 3.3
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 29 3.3
Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical pr... 28 7.7
L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical pr... 28 7.7
L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 161 bits (392), Expect = 3e-40
Identities = 76/81 (93%), Positives = 78/81 (96%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF EFKRK+KKD
Sbjct: 194 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKKD 253
Query: 191 LATNKRALRRLRTACERAKRT 253
LA+N RALRRLRTACERAKRT
Sbjct: 254 LASNPRALRRLRTACERAKRT 274
Score = 159 bits (385), Expect = 2e-39
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LSSS+QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q
Sbjct: 272 KRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQ 331
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
+HDIVLVGGSTRIPKVQKLL D F+GKE
Sbjct: 332 VHDIVLVGGSTRIPKVQKLLSDLFSGKE 359
Score = 80.6 bits (190), Expect = 1e-15
Identities = 43/72 (59%), Positives = 43/72 (59%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K NKSINPDE IL GDKSE VQD GIETAGGVMT LIKR
Sbjct: 358 KELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKR 417
Query: 681 NTTIPTKQTQTF 716
NTTIPTK QTF
Sbjct: 418 NTTIPTKTAQTF 429
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 158 bits (383), Expect = 4e-39
Identities = 77/87 (88%), Positives = 82/87 (94%)
Frame = +1
Query: 247 EDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQI 426
E LSSS QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+
Sbjct: 273 ETLSSSCQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQV 332
Query: 427 HDIVLVGGSTRIPKVQKLLQDFFNGKE 507
HDIVLVGGSTRIPKVQKLL D F+GKE
Sbjct: 333 HDIVLVGGSTRIPKVQKLLSDLFSGKE 359
Score = 157 bits (382), Expect = 6e-39
Identities = 74/81 (91%), Positives = 76/81 (93%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF EFKRK+KKD
Sbjct: 194 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKKD 253
Query: 191 LATNKRALRRLRTACERAKRT 253
LA+N RALRRLRTACERA T
Sbjct: 254 LASNPRALRRLRTACERANET 274
Score = 80.6 bits (190), Expect = 1e-15
Identities = 43/72 (59%), Positives = 43/72 (59%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K NKSINPDE IL GDKSE VQD GIETAGGVMT LIKR
Sbjct: 358 KELNKSINPDEALAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKR 417
Query: 681 NTTIPTKQTQTF 716
NTTIPTK QTF
Sbjct: 418 NTTIPTKTAQTF 429
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 141 bits (342), Expect = 4e-34
Identities = 65/88 (73%), Positives = 79/88 (89%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK++
Sbjct: 272 KRTLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSK 331
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
I ++VLVGGSTR+PK+QKLL+DFFNGKE
Sbjct: 332 IDEVVLVGGSTRVPKIQKLLKDFFNGKE 359
Score = 137 bits (332), Expect = 6e-33
Identities = 65/82 (79%), Positives = 73/82 (89%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 187
+NVLIFDLGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD RM+ HF+ EFKRK K
Sbjct: 193 KNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRMLQHFMNEFKRKTGK 252
Query: 188 DLATNKRALRRLRTACERAKRT 253
D++ N RA+RRLRTACERAKRT
Sbjct: 253 DISPNPRAIRRLRTACERAKRT 274
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/72 (47%), Positives = 38/72 (52%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K N SINPDE +L G K E ++D GIETAGGVMT LI R
Sbjct: 358 KELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDR 417
Query: 681 NTTIPTKQTQTF 716
NT IPTK +TF
Sbjct: 418 NTRIPTKACKTF 429
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 141 bits (342), Expect = 4e-34
Identities = 65/88 (73%), Positives = 79/88 (89%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK++
Sbjct: 272 KRTLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSK 331
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
I ++VLVGGSTR+PK+QKLL+DFFNGKE
Sbjct: 332 IDEVVLVGGSTRVPKIQKLLKDFFNGKE 359
Score = 137 bits (332), Expect = 6e-33
Identities = 65/82 (79%), Positives = 73/82 (89%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 187
+NVLIFDLGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD RM+ HF+ EFKRK K
Sbjct: 193 KNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDQRMLQHFMNEFKRKTGK 252
Query: 188 DLATNKRALRRLRTACERAKRT 253
D++ N RA+RRLRTACERAKRT
Sbjct: 253 DISPNPRAIRRLRTACERAKRT 274
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/72 (47%), Positives = 38/72 (52%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K N SINPDE +L G K E ++D GIETAGGVMT LI R
Sbjct: 358 KELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGIETAGGVMTNLIDR 417
Query: 681 NTTIPTKQTQTF 716
NT IPTK +TF
Sbjct: 418 NTRIPTKACKTF 429
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 141 bits (341), Expect = 5e-34
Identities = 64/88 (72%), Positives = 79/88 (89%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LSSST+A++E+DSLF+G DFY+ ITRARFEEL ADLFR T+EPVEK+LRDAK DK +
Sbjct: 272 KRTLSSSTEATVEVDSLFDGTDFYSKITRARFEELCADLFRKTLEPVEKALRDAKTDKGR 331
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
I ++VLVGGSTRIPK+QKLL++FFNGK+
Sbjct: 332 IDEVVLVGGSTRIPKIQKLLKEFFNGKD 359
Score = 136 bits (329), Expect = 1e-32
Identities = 63/82 (76%), Positives = 75/82 (91%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 187
+N+LIFDLGGGTFDVSIL+I +G IFEVKSTAGDTHLGGEDFD+R++ HF+ EFKRK K
Sbjct: 193 KNILIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLGGEDFDSRVLQHFMTEFKRKTGK 252
Query: 188 DLATNKRALRRLRTACERAKRT 253
D+++N RA+RRLRTACERAKRT
Sbjct: 253 DISSNPRAIRRLRTACERAKRT 274
Score = 60.9 bits (141), Expect = 9e-10
Identities = 32/72 (44%), Positives = 38/72 (52%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K N SINPDE +L G K + ++D GIETAGGVMT LI R
Sbjct: 358 KDLNCSINPDEAVAFGAAVQAAVLSGVKDDTIKDVLLVDVVPLSHGIETAGGVMTNLIDR 417
Query: 681 NTTIPTKQTQTF 716
NT IP K ++TF
Sbjct: 418 NTRIPAKASKTF 429
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 126 bits (303), Expect = 2e-29
Identities = 57/91 (62%), Positives = 74/91 (81%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 417
+ K LS+ Q IEI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L DA M K
Sbjct: 296 KAKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMKK 355
Query: 418 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
+H+IVLVGGSTRIPKVQ+L++D+FNGKEP
Sbjct: 356 TDVHEIVLVGGSTRIPKVQQLIKDYFNGKEP 386
Score = 113 bits (273), Expect = 9e-26
Identities = 49/87 (56%), Positives = 68/87 (78%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
RN+L+FDLGGGTFDVS+LTI+ G+FEV +T GDTHLGGEDFD R++ +F++ +K+K KD
Sbjct: 220 RNILVFDLGGGTFDVSLLTIDSGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKD 279
Query: 191 LATNKRALRRLRTACERAKRTCHRPHK 271
L + RA+++LR E+AKR H+
Sbjct: 280 LRKDNRAVQKLRREVEKAKRALSTQHQ 306
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/72 (40%), Positives = 35/72 (48%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K ++ INPDE ++ G E D GIET GGVMT LI R
Sbjct: 384 KEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGGVMTKLIGR 441
Query: 681 NTTIPTKQTQTF 716
NT IPTK++Q F
Sbjct: 442 NTVIPTKKSQVF 453
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 122 bits (293), Expect = 3e-28
Identities = 54/91 (59%), Positives = 74/91 (81%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 417
+ K LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K
Sbjct: 299 KAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKK 358
Query: 418 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
+H+IVLVGGSTRIPKVQ+L+++FFNGKEP
Sbjct: 359 DDVHEIVLVGGSTRIPKVQQLIKEFFNGKEP 389
Score = 116 bits (278), Expect = 2e-26
Identities = 50/87 (57%), Positives = 70/87 (80%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
RN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ +F++ +K+K KD
Sbjct: 223 RNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKD 282
Query: 191 LATNKRALRRLRTACERAKRTCHRPHK 271
L +KRA+++LR E+AKR H+
Sbjct: 283 LRKDKRAVQKLRREVEKAKRALSTQHQ 309
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/85 (35%), Positives = 41/85 (48%)
Frame = +3
Query: 462 PQGAEAPARFL*WKGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 641
P+ + F K ++ INPDE ++ G+ E+ + GI
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGI 431
Query: 642 ETAGGVMTTLIKRNTTIPTKQTQTF 716
ET GGVMT LI RNT IPTK++Q F
Sbjct: 432 ETVGGVMTKLIGRNTVIPTKKSQVF 456
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 122 bits (293), Expect = 3e-28
Identities = 54/91 (59%), Positives = 74/91 (81%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 417
+ K LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K
Sbjct: 299 KAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKK 358
Query: 418 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
+H+IVLVGGSTRIPKVQ+L+++FFNGKEP
Sbjct: 359 DDVHEIVLVGGSTRIPKVQQLIKEFFNGKEP 389
Score = 116 bits (278), Expect = 2e-26
Identities = 50/87 (57%), Positives = 70/87 (80%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
RN+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD R++ +F++ +K+K KD
Sbjct: 223 RNILVFDLGGGTFDVSMLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKD 282
Query: 191 LATNKRALRRLRTACERAKRTCHRPHK 271
L +KRA+++LR E+AKR H+
Sbjct: 283 LRKDKRAVQKLRREVEKAKRALSTQHQ 309
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/85 (35%), Positives = 41/85 (48%)
Frame = +3
Query: 462 PQGAEAPARFL*WKGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGI 641
P+ + F K ++ INPDE ++ G+ E+ + GI
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGE--EDTGEIVLLDVNPLTMGI 431
Query: 642 ETAGGVMTTLIKRNTTIPTKQTQTF 716
ET GGVMT LI RNT IPTK++Q F
Sbjct: 432 ETVGGVMTKLIGRNTVIPTKKSQVF 456
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 102 bits (245), Expect = 2e-22
Identities = 46/77 (59%), Positives = 61/77 (79%)
Frame = +2
Query: 17 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 196
+ ++DLGGGTFDVSIL I+ G+FEVKST GDT LGGEDFD+ +V+H V EFK++ DL
Sbjct: 219 IAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLT 278
Query: 197 TNKRALRRLRTACERAK 247
+ +A++RLR A E+AK
Sbjct: 279 KDPQAMQRLREAAEKAK 295
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDA 405
+ K +LSS+TQ I + + +TRA+FE++ DL + T+EP L DA
Sbjct: 293 KAKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCRNVLHDA 352
Query: 406 KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
++ +QI D++LVGG +R+PKVQ +Q+ F GK P
Sbjct: 353 EVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVP 386
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/72 (43%), Positives = 38/72 (52%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K +K++NPDE +L GD V D GIET GG+MT LI R
Sbjct: 384 KVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITR 439
Query: 681 NTTIPTKQTQTF 716
NTTIPTK++Q F
Sbjct: 440 NTTIPTKKSQVF 451
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 102 bits (245), Expect = 2e-22
Identities = 46/77 (59%), Positives = 61/77 (79%)
Frame = +2
Query: 17 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 196
+ ++DLGGGTFDVSIL I+ G+FEVKST GDT LGGEDFD+ +V+H V EFK++ DL
Sbjct: 219 IAVYDLGGGTFDVSILEIQKGVFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLT 278
Query: 197 TNKRALRRLRTACERAK 247
+ +A++RLR A E+AK
Sbjct: 279 KDPQAMQRLREAAEKAK 295
Score = 70.5 bits (165), Expect = 1e-12
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSLRDA 405
+ K +LSS+TQ I + + +TRA+FE++ DL + T+EP K+L DA
Sbjct: 293 KAKCELSSTTQTDINLPYITMDQSGPKHLNLKLTRAKFEQIVGDLIKRTIEPCRKALHDA 352
Query: 406 KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
++ +QI D++LVGG +R+PKVQ +Q+ F GK P
Sbjct: 353 EVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVP 386
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/72 (43%), Positives = 38/72 (52%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K +K++NPDE +L GD V D GIET GG+MT LI R
Sbjct: 384 KVPSKAVNPDEAVAMGAAIQGAVLAGD----VTDVLLLDVTPLSLGIETLGGIMTKLITR 439
Query: 681 NTTIPTKQTQTF 716
NTTIPTK++Q F
Sbjct: 440 NTTIPTKKSQVF 451
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = +2
Query: 5 TRRNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 184
+RRN+LI+DLGGGTFDV+ + ++ VK+ GDTHLGG+D DN ++ ++EFK ++
Sbjct: 188 SRRNILIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMIKMLEEFKNRHG 247
Query: 185 KDLATNKRALRRLRTACERAKRT 253
DL N RAL+R+R A E AK T
Sbjct: 248 IDLKGNYRALKRIRKAAEVAKIT 270
Score = 71.7 bits (168), Expect = 5e-13
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LS+S+ A IE++ L GIDF I+R FE +L +T+ VE+ +R+A + K+Q
Sbjct: 268 KITLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKSQ 327
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFF 495
I++IVLVGGSTRIP ++ +++ F
Sbjct: 328 INEIVLVGGSTRIPILKNIIKQSF 351
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 513 KSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTI 692
+SI+PDE +L G +EEVQD G++ M+ LIK+ T
Sbjct: 359 ESIHPDEAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVF 416
Query: 693 PTKQTQTF 716
P + +TF
Sbjct: 417 PCTKRKTF 424
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = +2
Query: 5 TRRNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 184
+RRN+LI+DLGGGTFDV+ + ++ VK+ GDTHLGG+D DN ++ ++EFK ++
Sbjct: 188 SRRNILIYDLGGGTFDVAAVNVDGPRITVKAKGGDTHLGGQDIDNIIMIKMLEEFKNRHG 247
Query: 185 KDLATNKRALRRLRTACERAKRT 253
DL N RAL+R+R A E AK T
Sbjct: 248 IDLKGNYRALKRIRKAAEVAKIT 270
Score = 71.7 bits (168), Expect = 5e-13
Identities = 37/84 (44%), Positives = 57/84 (67%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K LS+S+ A IE++ L GIDF I+R FE +L +T+ VE+ +R+A + K+Q
Sbjct: 268 KITLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKSQ 327
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFF 495
I++IVLVGGSTRIP ++ +++ F
Sbjct: 328 INEIVLVGGSTRIPILKNIIKQSF 351
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 513 KSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNTTI 692
+SI+PDE +L G +EEVQD G++ M+ LIK+ T
Sbjct: 359 ESIHPDEAVAYGAAIMAAVLSG--AEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVF 416
Query: 693 PTKQTQTF 716
P + +TF
Sbjct: 417 PCTKRKTF 424
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 72.1 bits (169), Expect = 4e-13
Identities = 30/78 (38%), Positives = 52/78 (66%)
Frame = +2
Query: 14 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDL 193
NV++ DLGGGT DVS+L ++ G+F ++ AG+ LGG+DF++R+ H + + K+ K +
Sbjct: 228 NVVVVDLGGGTLDVSVLWLQGGVFVTQAMAGNNRLGGQDFNDRVQKHLISKIAEKFGKTI 287
Query: 194 ATNKRALRRLRTACERAK 247
NK ++++R E+ K
Sbjct: 288 -DNKEDIQQIRMEVEKGK 304
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = +1
Query: 238 EGKEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 417
+GK L++ +I ++ G Y +TR FE LN DL ++ P+ +L DA +D
Sbjct: 302 KGKIRLTNVPSTTISLNLKTVGKWNY-ELTRDEFETLNGDLLKAIELPITAALADANLDT 360
Query: 418 AQIHDIVLVGGSTRIPKVQKLLQDFF 495
A + +IVLVGGST++P V+K++ FF
Sbjct: 361 ADVDEIVLVGGSTQVPAVRKIVGRFF 386
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K+ LS++ + +I+S E ID +TR F L +D+ EP+E++LR A++
Sbjct: 306 KQVLSANAEHFAQIESAHEDIDAKLKVTREDFNHLISDMESRFGEPIEQALRMAQIPIDD 365
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
I VL+G TR+PKVQ+++Q KE
Sbjct: 366 IDQFVLMGAGTRVPKVQEIVQKTIGTKE 393
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 107 DTHLGGEDFDNRMVNHFVQEFKRKY--KKDLATNKRALRRLRTACERAKR 250
D LGG + NR+ +H ++ F++ Y K + TN+RA+ + ER K+
Sbjct: 258 DRTLGGIEMTNRLRDHLIEMFEKNYKPKTKVNTNRRAMTKFSKEAERLKQ 307
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/80 (37%), Positives = 43/80 (53%)
Frame = +2
Query: 11 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 190
RNV+ D+G + S++ G ++ +T+ D GG FD + HF +EFK KY D
Sbjct: 198 RNVVFLDIGHSSTQASLVAFNRGKLQMVNTSYDLESGGIWFDALIREHFRKEFKTKYGID 257
Query: 191 LATNKRALRRLRTACERAKR 250
AT+ R RL CER K+
Sbjct: 258 AATSPRPWLRLLDECERVKK 277
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K+ ++ T + I+ E D + R FE+L A +F + + D K +
Sbjct: 277 KQMSANQTPIPLNIECFMEDKDVTGKMQRQEFEDLAAPIFNRIKQVLINLFADGVSIKPE 336
Query: 424 -IHDIVLVGGSTRIPKVQKLLQDFFNGKEP 510
I +I +VGGS+RIP ++++++D F GKEP
Sbjct: 337 EIDEIEIVGGSSRIPMIREIVKDLF-GKEP 365
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K+ LS++ +++SLFE +F +TR E++ DL P+ ++ A++
Sbjct: 293 KQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQISTND 352
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
I +VL+G TR+PKV+++L+ KE
Sbjct: 353 IDLVVLMGAGTRVPKVKEILKTILKDKE 380
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 107 DTHLGGEDFDNRMVNHFVQEFKRKYK--KDLATNKRALRRLRTACERAKR 250
D LGG + NR+ +H + F+ K KD++TN RA+ +L ER K+
Sbjct: 245 DKTLGGLEITNRLRDHLEKVFRDTVKTSKDISTNARAIGKLHKEAERVKQ 294
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/88 (30%), Positives = 49/88 (55%)
Frame = +1
Query: 244 KEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 423
K+ LS++ +++SLFE +F +TR E++ DL P+ ++ A++
Sbjct: 309 KQVLSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQISTND 368
Query: 424 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 507
I +VL+G TR+PKV+++L+ KE
Sbjct: 369 IDLVVLMGAGTRVPKVKEILKTILKDKE 396
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 107 DTHLGGEDFDNRMVNHFVQEFKRKYK--KDLATNKRALRRLRTACERAKR 250
D LGG + NR+ +H + F+ K KD++TN RA+ +L ER K+
Sbjct: 261 DKTLGGLEITNRLRDHLEKVFRDTVKTSKDISTNARAIGKLHKEAERVKQ 310
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/72 (40%), Positives = 35/72 (48%)
Frame = +3
Query: 501 KGANKSINPDEXXXXXXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKR 680
K ++ INPDE ++ G E D GIET GGVMT LI R
Sbjct: 15 KEPSRGINPDEAVAYGAAVQAGVIGG--VENTGDVVLLDVNPLTLGIETVGGVMTKLIGR 72
Query: 681 NTTIPTKQTQTF 716
NT IPTK++Q F
Sbjct: 73 NTVIPTKKSQVF 84
Score = 35.1 bits (77), Expect = 0.051
Identities = 13/17 (76%), Positives = 17/17 (100%)
Frame = +1
Query: 460 IPKVQKLLQDFFNGKEP 510
IPKVQ+L++D+FNGKEP
Sbjct: 1 IPKVQQLIKDYFNGKEP 17
>AF101318-8|AAC69343.2| 342|Caenorhabditis elegans Hypothetical
protein Y73C8C.2 protein.
Length = 342
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 24 SLTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLP 200
SLT+ PST SLP+ +S+ P T T VRT T W+ S + + +TKRT P
Sbjct: 150 SLTTTTAPST--SLPTSTISTT---KPTTTT-SVRTTT-QWNAVTSTTLQQSTKRTGCP 201
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 39 AVPST---CPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTRE 209
AVP+T PS P+ VS++ P P TP R A TT +R+SR T R + T E
Sbjct: 631 AVPTTTPLAPSAPTVRVSTQRAPVPTTP----RPTAPAVQTTTTRASRLETTRVPVKTVE 686
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Frame = -3
Query: 677 LDECGHDTSSSLNTEG---KGCYIKQQQILHLLRLVTVQDSSLDSCTISYGLVRVNRFVG 507
+D C D + +L T+ +G + Q+ + + SL + LVR +
Sbjct: 477 VDICCFDKTGTLTTDNLVVEGVALNNQKEGMIRNAEDLPHESLQVLASCHSLVRFEEDLV 536
Query: 506 SFPLKKSCRSFC----TLGIRVEPPTSTISWI*ALSILASRRDFST 381
PL+K+C S+C T G V PP + I + I R FS+
Sbjct: 537 GDPLEKACLSWCGWNLTKGDAVMPPKTAAKGISGIKIF-HRYHFSS 581
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 30 TSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTS 194
T+ VPST P+ + ++ P +T T T T STT + + + T TS
Sbjct: 599 TTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 30 TSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTS 194
T+ VPST P+ + ++ P +T T T T STT + + + T TS
Sbjct: 599 TTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
>AC006648-4|AAF39852.2| 71|Caenorhabditis elegans Hypothetical
protein F59H6.3 protein.
Length = 71
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 96 PPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLP 200
PPP TPTW V L + W+ R R T S P
Sbjct: 21 PPPNTPTWTV--LFVNWTIIHHRLQRSPTPAASWP 53
>Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical
protein W06D12.5 protein.
Length = 631
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 241 PLTCSTQTPKSSLVGSEVLFVFPLELLDKVVDHAIVKVLTSQVGVAGGGF 92
P T Q S GSEV P E+L+ + +I + S + GGGF
Sbjct: 535 PSTPKVQRALSVDAGSEVQDETPNEILNNLTVRSIATFMKSNADIYGGGF 584
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 241 GKEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 399
G + L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 370 GLDALRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 423
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 241 GKEDLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 399
G + L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 434 GLDALRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 487
>Z73977-1|CAA98290.1| 573|Caenorhabditis elegans Hypothetical
protein T28B11.1 protein.
Length = 573
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 245 KRTCHRPHKRALR*ILSLRVLTSTRQLLVLASRS*TPI 358
+RTC PH + R ++ L+ +R++++ R +PI
Sbjct: 453 ERTCRIPHPKDRRVVIQLKYCKPSRRMVLTIEREDSPI 490
>L08403-5|AAT92077.1| 531|Caenorhabditis elegans Hypothetical
protein F42H10.7b protein.
Length = 531
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 454 WSHPPVQYRGFEPYPSWHHGETSPLAPW 371
WS P R P +W G T+P + W
Sbjct: 463 WSRPSSSKRSTTPGSAWSRGSTTPGSSW 490
>L08403-4|AAA28021.1| 529|Caenorhabditis elegans Hypothetical
protein F42H10.7a protein.
Length = 529
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 454 WSHPPVQYRGFEPYPSWHHGETSPLAPW 371
WS P R P +W G T+P + W
Sbjct: 461 WSRPSSSKRSTTPGSAWSRGSTTPGSSW 488
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,970,459
Number of Sequences: 27780
Number of extensions: 364153
Number of successful extensions: 1227
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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