Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20035
(493 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a pr... 102 6e-22
BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a ... 102 6e-22
AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a ... 102 6e-22
AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A ... 102 6e-22
BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for IM... 101 1e-21
BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a ... 99 4e-21
AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a ... 35 0.13
BC110340-1|AAI10341.1| 323|Homo sapiens lectin, galactoside-bin... 31 2.2
BC105944-1|AAI05945.1| 323|Homo sapiens lectin, galactoside-bin... 31 2.2
BC105942-1|AAI05943.1| 323|Homo sapiens lectin, galactoside-bin... 31 2.2
AK223232-1|BAD96952.1| 323|Homo sapiens galectin 9 short isofor... 31 2.2
AJ288083-1|CAB93851.1| 355|Homo sapiens galectin-9 protein. 31 2.2
AB040130-3|BAB83625.1| 355|Homo sapiens galectin-9 protein. 31 2.2
AB040130-2|BAB83624.1| 323|Homo sapiens galectin-9 protein. 31 2.2
AB040130-1|BAB83623.1| 311|Homo sapiens galectin-9 protein. 31 2.2
AB006782-1|BAA22166.1| 355|Homo sapiens galectin-9 isoform prot... 31 2.2
AB005894-1|BAA31542.1| 323|Homo sapiens ecalectin protein. 31 2.2
Z49107-1|CAA88922.1| 323|Homo sapiens galectin protein. 31 2.9
BC105943-1|AAI05944.1| 356|Homo sapiens galectin-9 like protein. 31 2.9
BC073889-1|AAH73889.1| 356|Homo sapiens similar to galectin 9 s... 31 2.9
AY358091-1|AAQ88458.1| 126|Homo sapiens VFLL3057 protein. 29 6.6
AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens ... 29 8.8
>U14968-1|AAA85656.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 102 bits (245), Expect = 6e-22
Identities = 43/78 (55%), Positives = 54/78 (69%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 202 FHFRKNKNFCPVLNLDKL 255
+H ++N++FCP +NLDKL
Sbjct: 61 YHLKRNQSFCPTVNLDKL 78
Score = 58.8 bits (136), Expect = 9e-09
Identities = 33/88 (37%), Positives = 42/88 (47%)
Frame = +3
Query: 201 FPL*KEQEFLSSFELR*AWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 380
+ L + Q F + L WTLVSEQTR+ A G P+I++V++ PKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 381 PVIVXXXXXXXXXXXXXXDVGGACVLSA 464
PVIV VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>BC005326-1|AAH05326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 102 bits (245), Expect = 6e-22
Identities = 43/78 (55%), Positives = 54/78 (69%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 202 FHFRKNKNFCPVLNLDKL 255
+H ++N++FCP +NLDKL
Sbjct: 61 YHLKRNQSFCPTVNLDKL 78
Score = 58.8 bits (136), Expect = 9e-09
Identities = 33/88 (37%), Positives = 42/88 (47%)
Frame = +3
Query: 201 FPL*KEQEFLSSFELR*AWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 380
+ L + Q F + L WTLVSEQTR+ A G P+I++V++ PKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 381 PVIVXXXXXXXXXXXXXXDVGGACVLSA 464
PVIV VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>AJ400879-2|CAC35388.1| 106|Homo sapiens ribosomal protein L27a
protein.
Length = 106
Score = 102 bits (245), Expect = 6e-22
Identities = 43/78 (55%), Positives = 54/78 (69%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 202 FHFRKNKNFCPVLNLDKL 255
+H ++N++FCP +NLDKL
Sbjct: 61 YHLKRNQSFCPTVNLDKL 78
Score = 38.7 bits (86), Expect = 0.011
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 201 FPL*KEQEFLSSFELR*AWTLVSEQTRLKYASAPDGKVPVINIVKA 338
+ L + Q F + L WTLVSEQTR+ A G P+I++V++
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106
>AB020236-1|BAA77361.1| 148|Homo sapiens ribosomal protein L27A
protein.
Length = 148
Score = 102 bits (245), Expect = 6e-22
Identities = 43/78 (55%), Positives = 54/78 (69%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 202 FHFRKNKNFCPVLNLDKL 255
+H ++N++FCP +NLDKL
Sbjct: 61 YHLKRNQSFCPTVNLDKL 78
Score = 58.8 bits (136), Expect = 9e-09
Identities = 33/88 (37%), Positives = 42/88 (47%)
Frame = +3
Query: 201 FPL*KEQEFLSSFELR*AWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 380
+ L + Q F + L WTLVSEQTR+ A G P+I++V++ PKQ
Sbjct: 61 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120
Query: 381 PVIVXXXXXXXXXXXXXXDVGGACVLSA 464
PVIV VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>BC020169-1|AAH20169.1| 147|Homo sapiens Unknown (protein for
IMAGE:3543815) protein.
Length = 147
Score = 101 bits (243), Expect = 1e-21
Identities = 42/73 (57%), Positives = 52/73 (71%)
Frame = +1
Query: 37 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 216
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 5 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64
Query: 217 NKNFCPVLNLDKL 255
N++FCP +NLDKL
Sbjct: 65 NQSFCPTVNLDKL 77
Score = 58.8 bits (136), Expect = 9e-09
Identities = 33/88 (37%), Positives = 42/88 (47%)
Frame = +3
Query: 201 FPL*KEQEFLSSFELR*AWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 380
+ L + Q F + L WTLVSEQTR+ A G P+I++V++ PKQ
Sbjct: 60 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 119
Query: 381 PVIVXXXXXXXXXXXXXXDVGGACVLSA 464
PVIV VGGACVL A
Sbjct: 120 PVIVKAKFFSRRAEEKIKSVGGACVLVA 147
>BC066326-1|AAH66326.1| 148|Homo sapiens ribosomal protein L27a
protein.
Length = 148
Score = 99 bits (238), Expect = 4e-21
Identities = 42/78 (53%), Positives = 54/78 (69%)
Frame = +1
Query: 22 MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 201
M + +KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60
Query: 202 FHFRKNKNFCPVLNLDKL 255
++ ++N++FCP +NLDKL
Sbjct: 61 YNLKRNQSFCPTVNLDKL 78
Score = 55.6 bits (128), Expect = 9e-08
Identities = 32/88 (36%), Positives = 41/88 (46%)
Frame = +3
Query: 201 FPL*KEQEFLSSFELR*AWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 380
+ L + Q F + L WTLVSEQTR+ A G P+I++V++ KQ
Sbjct: 61 YNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQ 120
Query: 381 PVIVXXXXXXXXXXXXXXDVGGACVLSA 464
PVIV VGGACVL A
Sbjct: 121 PVIVKAKLFSRRAEEKIKSVGGACVLVA 148
>AB007178-1|BAA25837.1| 34|Homo sapiens ribosomal protein L27a
protein.
Length = 34
Score = 35.1 bits (77), Expect = 0.13
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 255 WTLVSEQTRLKYASAPDGKVPVINIVKA 338
WTLVSEQTR+ A G P+I++V++
Sbjct: 7 WTLVSEQTRVNAAKNKTGAAPIIDVVRS 34
>BC110340-1|AAI10341.1| 323|Homo sapiens lectin,
galactoside-binding, soluble, 9 (galectin 9) protein.
Length = 323
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 204 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 244
>BC105944-1|AAI05945.1| 323|Homo sapiens lectin,
galactoside-binding, soluble, 9 (galectin 9) protein.
Length = 323
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 204 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 244
>BC105942-1|AAI05943.1| 323|Homo sapiens lectin,
galactoside-binding, soluble, 9 (galectin 9) protein.
Length = 323
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 204 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 244
>AK223232-1|BAD96952.1| 323|Homo sapiens galectin 9 short isoform
variant protein.
Length = 323
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 204 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 244
>AJ288083-1|CAB93851.1| 355|Homo sapiens galectin-9 protein.
Length = 355
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 236 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 276
>AB040130-3|BAB83625.1| 355|Homo sapiens galectin-9 protein.
Length = 355
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 236 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 276
>AB040130-2|BAB83624.1| 323|Homo sapiens galectin-9 protein.
Length = 323
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 204 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 244
>AB040130-1|BAB83623.1| 311|Homo sapiens galectin-9 protein.
Length = 311
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 192 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 232
>AB006782-1|BAA22166.1| 355|Homo sapiens galectin-9 isoform
protein.
Length = 355
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 236 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 276
>AB005894-1|BAA31542.1| 323|Homo sapiens ecalectin protein.
Length = 323
Score = 31.1 bits (67), Expect = 2.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 204 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDENA 244
>Z49107-1|CAA88922.1| 323|Homo sapiens galectin protein.
Length = 323
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 343 YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
YP+ +IL++GT+ A + +CS ++ +L+ + D N+
Sbjct: 204 YPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNLRFDENA 244
>BC105943-1|AAI05944.1| 356|Homo sapiens galectin-9 like protein.
Length = 356
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/47 (25%), Positives = 29/47 (61%)
Frame = -1
Query: 361 LPSNL*YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
+P L YP+ +I+++GT+ A + +CS +++ +++ + D N+
Sbjct: 232 IPGGL-YPSKSIILSGTVLPSAQRFHINLCSGSHIAFHMNPRFDENA 277
>BC073889-1|AAH73889.1| 356|Homo sapiens similar to galectin 9
short isoform protein.
Length = 356
Score = 30.7 bits (66), Expect = 2.9
Identities = 12/47 (25%), Positives = 29/47 (61%)
Frame = -1
Query: 361 LPSNL*YPALTILMTGTLPSGADAYFSLVCSETNVQAYLSSKLDRNS 221
+P L YP+ +I+++GT+ A + +CS +++ +++ + D N+
Sbjct: 232 IPGGL-YPSKSIILSGTVLPSAQRFHINLCSGSHIAFHMNPRFDENA 277
>AY358091-1|AAQ88458.1| 126|Homo sapiens VFLL3057 protein.
Length = 126
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -3
Query: 191 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 39
P+LPK+PG ++ L W S P P G + + PCP PL FLV+
Sbjct: 55 PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104
>AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ44237 fis, clone THYMU3007845. ).
Length = 139
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/43 (27%), Positives = 15/43 (34%)
Frame = +2
Query: 335 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGCGWCLCTIC 463
+W L Q PQ + L R + C WC C C
Sbjct: 71 AWFLSPVHHSQIPQLAACPLQSLRLSKPRSPGRCCAWCGCLNC 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,349,129
Number of Sequences: 237096
Number of extensions: 1458588
Number of successful extensions: 2950
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2943
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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