Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20032
(730 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 94 4e-18
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 87 5e-16
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 87 5e-16
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 74 4e-12
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 74 4e-12
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 73 7e-12
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 73 1e-11
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 71 2e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 71 4e-11
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 71 4e-11
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 71 4e-11
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 71 4e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 70 5e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 70 5e-11
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 70 5e-11
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 70 7e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 69 9e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 69 9e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 69 1e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 68 3e-10
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 67 4e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 66 1e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 64 3e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 64 4e-09
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 64 4e-09
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 62 2e-08
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 62 2e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 61 2e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 61 2e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 4e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 59 1e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 2e-07
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 56 9e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 53 6e-06
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 52 1e-05
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 51 3e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 4e-05
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 50 4e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 49 1e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 45 0.002
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 44 0.003
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 44 0.003
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 42 0.015
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.036
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 40 0.047
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 40 0.082
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 39 0.14
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 39 0.14
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 39 0.14
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 38 0.19
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 38 0.19
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 38 0.33
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 38 0.33
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 38 0.33
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 38 0.33
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 37 0.58
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 37 0.58
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 37 0.58
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 36 1.0
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 36 1.3
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 35 2.3
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 35 2.3
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 35 2.3
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 35 2.3
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 34 4.1
UniRef50_A7QNM5 Cluster: Chromosome undetermined scaffold_133, w... 33 5.4
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 33 7.2
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 9.5
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 33 9.5
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 9.5
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 93.9 bits (223), Expect = 4e-18
Identities = 51/93 (54%), Positives = 58/93 (62%)
Frame = -1
Query: 292 KGGG*ESKSYIIYRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 113
K GG + RGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 112 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 14
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -2
Query: 435 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 256
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 255 IVG 247
I G
Sbjct: 138 IRG 140
Score = 71.3 bits (167), Expect = 2e-11
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = -3
Query: 656 YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKVIDQM 495
+ IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN + M
Sbjct: 4 WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 86.6 bits (205), Expect = 5e-16
Identities = 47/88 (53%), Positives = 50/88 (56%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 428 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 511
ISS SFDQ+P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/57 (71%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILY H++ FG
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFG 236
Score = 77.0 bits (181), Expect = 4e-13
Identities = 45/95 (47%), Positives = 48/95 (50%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXX 188
+GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 12 IGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIM 71
Query: 189 XXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVPL+LGAPD+AFPR F PP L
Sbjct: 72 IGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 86.6 bits (205), Expect = 5e-16
Identities = 47/88 (53%), Positives = 50/88 (56%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 428 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 511
ISS SFDQ+P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 79.4 bits (187), Expect = 8e-14
Identities = 39/57 (68%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILY H++ FG
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFG 212
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/70 (55%), Positives = 42/70 (60%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 264 *DFDSYPPPL 293
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 428 ISS 436
+SS
Sbjct: 138 VSS 140
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIY 666
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILY H++
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 66.1 bits (154), Expect = 8e-10
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 264 *DFDSYPPPL 293
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/82 (45%), Positives = 43/82 (52%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXX 188
+GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 16 IGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIM 75
Query: 189 XXXXXN*LVPLILGAPDIAFPR 254
N LVPL++GAPD+AFPR
Sbjct: 76 IGGFGNWLVPLMIGAPDMAFPR 97
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY H++ FG
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILY H++ FG
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFG 242
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 428 ISS 436
+SS
Sbjct: 158 VSS 160
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/97 (32%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXX 182
+GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 16 IGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMP 75
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N VP+++GAPD+AFPR F PP L
Sbjct: 76 AMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 72.9 bits (171), Expect = 7e-12
Identities = 37/57 (64%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILY H++ G
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXG 158
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 317 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY H++ FG
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFG 239
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 53.2 bits (122), Expect = 6e-06
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXX 182
+GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 13 IGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMP 72
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++GAPD+AFPR F PP L
Sbjct: 73 AMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 428 ISS 436
+SS
Sbjct: 156 LSS 158
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILY H++ FG
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/96 (36%), Positives = 45/96 (46%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXX 188
+G+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 16 IGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTM 75
Query: 189 XXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPLY 296
N VPL++GAPD+AFPR F PP L+
Sbjct: 76 IGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 428 ISS 436
ISS
Sbjct: 144 ISS 146
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/82 (42%), Positives = 42/82 (51%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXX 188
+GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 4 IGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIM 63
Query: 189 XXXXXN*LVPLILGAPDIAFPR 254
N L+PL++GAPD+AFPR
Sbjct: 64 IGGFGNWLIPLMIGAPDMAFPR 85
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 630
LFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXX 188
+GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 15 IGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVM 74
Query: 189 XXXXXN*LVPLILGAPDIAFPR 254
N LVPL++GAPD+AFPR
Sbjct: 75 IGGFGNWLVPLMIGAPDMAFPR 96
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILY H++ FG
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILY H++ FG
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFG 223
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPR 80
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/63 (49%), Positives = 35/63 (55%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 428 ISS 436
SS
Sbjct: 139 ASS 141
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILY H++ FG
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXX 188
+GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 15 IGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIL 74
Query: 189 XXXXXN*LVPLILGAPDIAFPR 254
N LVPL++GAPD+AFPR
Sbjct: 75 IGGFGNWLVPLMIGAPDMAFPR 96
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY H++ FG
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Score = 41.5 bits (93), Expect = 0.020
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPR
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY H++ FG
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Score = 41.5 bits (93), Expect = 0.020
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPR
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILY H++ FG
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFG 247
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 428 ISS 436
SS
Sbjct: 163 ASS 165
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXX 182
+GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 21 IGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMP 80
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++G+PD+AFPR F PP L
Sbjct: 81 VMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY H++ FG
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Score = 68.1 bits (159), Expect = 2e-10
Identities = 39/95 (41%), Positives = 46/95 (48%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXX 188
+GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 15 IGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIM 74
Query: 189 XXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVPL++GAPD+AFPR F PP L
Sbjct: 75 IGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIY 666
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY H++
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 53.2 bits (122), Expect = 6e-06
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXX 182
+GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 13 IGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMP 72
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++GAPD+AFPR F PP L
Sbjct: 73 AMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 53.2 bits (122), Expect = 6e-06
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXX 182
+GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 13 IGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMP 72
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++GAPD+AFPR F PP L
Sbjct: 73 AMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P IN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI Y H + FG
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFG 240
Score = 40.3 bits (90), Expect = 0.047
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPR
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPR 97
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFGTS 684
LFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY H++ FGT+
Sbjct: 184 LFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFGTT 242
Score = 39.5 bits (88), Expect = 0.082
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG L G++Q++N +V HA N ++PL++GA D AFPR
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPR 97
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+ HI+ FG
Sbjct: 289 LFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFG 345
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 428 ISS 436
SS
Sbjct: 261 ASS 263
Score = 36.7 bits (81), Expect = 0.58
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 65.7 bits (153), Expect = 1e-09
Identities = 56/181 (30%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 264 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFHQL* 443
F +P +Y + K +DE TP + + + +F ++ V L
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 444 EXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 620
C+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 621 F 623
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 383 GRSVDLAIFSLHLAGISS 436
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILY H++ FG
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFG 240
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPR 97
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 364
P +NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LY H++ FG
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFG 243
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/63 (49%), Positives = 33/63 (52%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 428 ISS 436
I S
Sbjct: 159 IGS 161
Score = 41.5 bits (93), Expect = 0.020
Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 RVGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 179
R+G LY EL PG L G+ YN I T H
Sbjct: 16 RIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVM 75
Query: 180 XXXXXXXXN*LVPLILGAPDIAFPR 254
N VP+++GAPD++FPR
Sbjct: 76 PILFGGFGNYFVPILIGAPDMSFPR 100
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LY H++ FG
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 323 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 123 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
++N ++TAH N VP+++GAPD+AFPR
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPR 136
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/63 (46%), Positives = 36/63 (57%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 428 ISS 436
ISS
Sbjct: 182 ISS 184
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/57 (57%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILY H++ FG
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFG 266
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPR 123
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY HI+ FG
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 39.5 bits (88), Expect = 0.082
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY HI+ FG
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 39.5 bits (88), Expect = 0.082
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY HI+ FG
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 39.5 bits (88), Expect = 0.082
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIY 666
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY HI+
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 39.5 bits (88), Expect = 0.082
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 412
P +NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 516 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFIS-HLFDFW 677
CM C +Y TCFS S+Y IIN K KY IF W P +S + FW
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFW 151
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 314 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 415
P +NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 416 HLAGISS 436
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 53.2 bits (122), Expect = 6e-06
Identities = 23/34 (67%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Frame = +1
Query: 580 ITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
IT++LTDRN NTSFF+ AGGGDPIL+ H++ FG
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFG 265
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/96 (33%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXX 185
+GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 43 IGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPA 102
Query: 186 XXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N L+PL++G PD+AFPR F PP L
Sbjct: 103 LIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +2
Query: 254 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 433
+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G S
Sbjct: 103 LNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFS 162
Query: 434 S 436
S
Sbjct: 163 S 163
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIY 666
LF AV TA A +T+ + DRN NTSFF+ AGGGD +LY H++
Sbjct: 189 LFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLF 241
Score = 41.9 bits (94), Expect = 0.015
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+ HI+ FG
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFG 242
Score = 41.5 bits (93), Expect = 0.020
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 428 ISS 436
ISS
Sbjct: 158 ISS 160
Score = 38.7 bits (86), Expect = 0.14
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 99 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
G L GD Q YN ++T+H N +P++ G PD+ FPR
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPR 99
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 53.2 bits (122), Expect = 6e-06
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXX 182
+GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 13 IGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMP 72
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N LVP+++GAPD+AFPR F PP L
Sbjct: 73 AMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
A IT+LL DRN T+FF+P+GGGDPIL+ H++ FG
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFG 329
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 326 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 VGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXX 182
+GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 17 IGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMP 76
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR*II*DFDSYPPPL 293
N VP+++G+PD+AFPR F PP L
Sbjct: 77 AMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P + N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 428 ISS 436
ISS
Sbjct: 145 ISS 147
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
+FV +T+F AG++ LL DRN NTSF+D GG+P+LY H++ FG
Sbjct: 193 MFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFG 249
Score = 44.0 bits (99), Expect = 0.004
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPR 107
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 428 ISS 436
+SS
Sbjct: 157 MSS 159
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
A +T+LL DR+ +TSF+ P GGGDPIL+ H++ FG
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFG 242
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 356 PLSSNIAHRGRSVDLAIFSLHLAGISS 436
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 519 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 623
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
A IT++LTD++L T F+D GGDP+LY H++ FG
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFG 223
Score = 36.7 bits (81), Expect = 0.58
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 329 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILY 657
AGA+T+L D+ L T+FF+PA GGDP++Y
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIY 187
Score = 37.9 bits (84), Expect = 0.25
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 96 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
PG + D + YN ++T H N L+PL++GA D+AFPR
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPR 54
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 574 GAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
G + +LL+D + NT FFDP GDPILY H++ FG
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFG 245
Score = 38.7 bits (86), Expect = 0.14
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 424
P IN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 425 GISS 436
G++S
Sbjct: 160 GVAS 163
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 41.9 bits (94), Expect = 0.015
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.036
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 317 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 523 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
++ +T+F ++ DR+ NT FF+ + GDP+LY H++ FG
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFG 245
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 40.3 bits (90), Expect = 0.047
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV ++ +T+F A T L+ DR + T FF+PA GGD +L+ H++ FG
Sbjct: 199 LFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFG 255
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 39.5 bits (88), Expect = 0.082
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYHIYL-IFG 678
LF ++ IT AG IT+LL+DRN N FF GG PIL+ L +FG
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFG 72
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D YN T H N ++PL+LGA D+AFPR
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPR 126
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 574 GAITILLTDRNL-NTSFFDPAGGGDPILY-HIYLIF 675
G + +L+T NL FDPA GGDP+L+ H++ +
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFY 264
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 38.7 bits (86), Expect = 0.14
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +1
Query: 574 GAITILLTDRNLNTSFFDPAGGGDPILYHIYLIF 675
G +LL D + TSFF P GGGDP+L+ + F
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWF 263
Score = 33.1 bits (72), Expect = 7.2
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL P + + D +YN + T H N L+P ++GAPD+AFP+
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL +PG + + YN+++T+H N L+PL++GA D+AFPR
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPR 177
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
AI +LL DRN TSFF AG G IL+ H++ FG
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFG 324
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 38.3 bits (85), Expect = 0.19
Identities = 16/26 (61%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +1
Query: 604 NLNTSFFDPAGGGDPILY-HIYLIFG 678
N T+FFDPAGGGD IL+ H++ FG
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFG 216
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 38.3 bits (85), Expect = 0.19
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIF 675
A A+ +L D TSFF+P GGGDP++Y H++ +
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFY 249
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 37.5 bits (83), Expect = 0.33
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D YN + T H N L+P+++GA D+AFP+
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPK 119
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 37.5 bits (83), Expect = 0.33
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RVGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXX 182
RVG LY EL G I DD +YNT + H
Sbjct: 16 RVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIP 75
Query: 183 XXXXXXXN*LVPLILGAPDIAFPR 254
N +PL++GA D+AFPR
Sbjct: 76 ALTGFFANYFIPLMIGAKDVAFPR 99
Score = 33.1 bits (72), Expect = 7.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILY 657
A+T+L D+ + T FFD A GGD + Y
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTY 231
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 37.5 bits (83), Expect = 0.33
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
A+ +LL DR L ++FFDP GG +L+ H + IFG
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFG 258
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = +1
Query: 571 AGAITILLTDRNLNTSFFDPAGGGDPILY-HIY 666
A A+ +LLTDR + FF+PA GGDPI Y H++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLF 237
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 36.7 bits (81), Expect = 0.58
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
AIT LL DRN+N++ +D GDP+LY H++ FG
Sbjct: 217 AITGLLLDRNINSTIYDVI--GDPVLYQHLFWFFG 249
Score = 33.5 bits (73), Expect = 5.4
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 335 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 436
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 36.7 bits (81), Expect = 0.58
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 36.7 bits (81), Expect = 0.58
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
A+ +LL DRN T+FF A GGDPI + H++ FG
Sbjct: 260 ALIMLLLDRNFGTTFFTVA-GGDPIFWQHLFWFFG 293
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 603 KLKYIIF*SCWRRRPNFIS-HLFDFWDILKLYFNFTRI 713
K KYIIF S W F+S + FW LYFNFT I
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSI 44
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPIL-YHIYLIFG 678
A+ ++ DR+ T+FF+ A GGDPIL H++ FG
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFG 400
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 34.7 bits (76), Expect = 2.3
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Frame = +1
Query: 532 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILY-HIYLIFG 678
+TA A +LL DR+ T FF GGGDPIL+ H++ IFG
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFG 277
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 329 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 34.7 bits (76), Expect = 2.3
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 598 DRNLNTSFFDPAGGGDPILY-HIYLIFG 678
+R + FFDP GGDP+L+ H++ IFG
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFG 281
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 34.7 bits (76), Expect = 2.3
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILY-HIYLIF 675
A +L DRN T FFD A GG P+L+ H++ +F
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMF 274
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 34.7 bits (76), Expect = 2.3
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +1
Query: 253 DK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 417
+K +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 577 AITILLTDRNLNTSFFDPAGGGDPILYHIYLIF 675
A ++L +R + S+F+PA GGDP+L+ + F
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWF 247
>UniRef50_A7QNM5 Cluster: Chromosome undetermined scaffold_133,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_133, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 492
Score = 33.5 bits (73), Expect = 5.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 630 CWRRRPNFISHLFDFWDILKLY 695
CW + +F+ HLFD + ILKL+
Sbjct: 141 CWHKHGSFLEHLFDMYKILKLW 162
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 33.1 bits (72), Expect = 7.2
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
LFV + AF A LL DR+ T FF P GGD +L+ H++ FG
Sbjct: 201 LFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFG 257
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 9.5
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 656 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 519
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 32.7 bits (71), Expect = 9.5
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
AEL PG ++ +N + T H N ++PL +GAPD+AFPR
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPR 121
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 32.7 bits (71), Expect = 9.5
Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 580 ITILLTDRNLNTSFFDPAGGGDPILY-HIYLIFG 678
+ +++ DR T+FF+P GG+ +++ H++ IFG
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFG 248
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,169,461
Number of Sequences: 1657284
Number of extensions: 9508143
Number of successful extensions: 20131
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 19205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20074
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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