BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20030
(713 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 24 5.4
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 9.5
AF185643-1|AAF15578.1| 117|Anopheles gambiae Toll-related prote... 23 9.5
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 9.5
AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeo... 23 9.5
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 23.8 bits (49), Expect = 5.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 515 IHQEDWLQPSCCRFRAHFWMARRQHVGAFNQN 610
I + WLQ + RA RR+H +F+ N
Sbjct: 990 ISGQSWLQLQQQKLRARREQQRREHSNSFSYN 1021
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 488 LRKSRRKILIHQEDWLQPSCCRF 556
+ SRR I++ E++++ CRF
Sbjct: 1136 VESSRRTIMVLSENFIKSEWCRF 1158
>AF185643-1|AAF15578.1| 117|Anopheles gambiae Toll-related protein
protein.
Length = 117
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 488 LRKSRRKILIHQEDWLQPSCCRF 556
+ SRR I++ E++++ CRF
Sbjct: 50 VESSRRTIMVLSENFIKSEWCRF 72
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.0 bits (47), Expect = 9.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -1
Query: 422 TPRVKASKACSRV*PFLEIPASNSPVPAATMSTAQSA*EVP 300
T R AS S P IPA + PVPA QS +P
Sbjct: 354 TSRPVASGPTSHYYPS-HIPAGSQPVPAVVNPHQQSRPTIP 393
>AF080565-1|AAC31945.1| 324|Anopheles gambiae Antennapedia homeotic
protein protein.
Length = 324
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 154 YAWVLDKLKAERERRYHNRYCSLEV 228
Y W+ + + +R R+ + RY +LE+
Sbjct: 235 YPWMRSQFERKRGRQTYTRYQTLEL 259
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,939
Number of Sequences: 2352
Number of extensions: 17215
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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