Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20030
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 275 2e-74
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 275 2e-74
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 265 2e-71
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 181 3e-52
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 180 7e-46
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 180 7e-46
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 161 6e-40
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 125 4e-29
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 77 2e-14
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 77 2e-14
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 72 5e-13
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 72 5e-13
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 72 5e-13
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 37 0.016
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 36 0.022
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 36 0.029
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 36 0.038
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 35 0.066
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.15
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.27
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.5
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.5
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 275 bits (674), Expect = 2e-74
Identities = 136/166 (81%), Positives = 140/166 (84%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 190 ERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 369
ER + + IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGI 127
Query: 370 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
SKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI E
Sbjct: 128 SKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNE 173
Score = 110 bits (265), Expect = 8e-25
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 689
S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+
Sbjct: 175 SGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDS 234
Query: 690 ILPP 701
I+PP
Sbjct: 235 IIPP 238
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 275 bits (674), Expect = 2e-74
Identities = 136/166 (81%), Positives = 140/166 (84%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 190 ERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 369
ER + + IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGI 127
Query: 370 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
SKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI E
Sbjct: 128 SKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNE 173
Score = 110 bits (265), Expect = 8e-25
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 689
S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+
Sbjct: 175 SGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDS 234
Query: 690 ILPP 701
I+PP
Sbjct: 235 IIPP 238
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 265 bits (650), Expect = 2e-71
Identities = 148/230 (64%), Positives = 155/230 (67%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 190 ERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 369
ER + + IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGI 127
Query: 370 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEDPHTSRRLATTQLL 549
SKNGQTREHALLA TLGVKQL+ S P P +SRR T Q L
Sbjct: 128 SKNGQTREHALLAQTLGVKQLV-------SLRSP----------TRSPDSSRRSDTIQRL 170
Query: 550 SLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCH 699
D TETTC C GSRDG + RK L E S +L PS H
Sbjct: 171 FHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSH 220
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 181 bits (441), Expect(2) = 3e-52
Identities = 89/110 (80%), Positives = 92/110 (83%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 190 ERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVA 339
ER + + IDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 68 ERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 110 bits (265), Expect = 8e-25
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 689
S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+
Sbjct: 141 SGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDS 200
Query: 690 ILPP 701
I+PP
Sbjct: 201 IIPP 204
Score = 41.9 bits (94), Expect(2) = 3e-52
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +1
Query: 430 LIVGVNKMDSTEPPYSEPRFEEIKKE 507
L+V NKMDSTEPP+SE RF EI E
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNE 139
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 180 bits (439), Expect = 7e-46
Identities = 91/166 (54%), Positives = 118/166 (71%), Gaps = 2/166 (1%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ER
Sbjct: 171 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEER 230
Query: 190 ERRYHNRY--CSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 363
ER S E + +++ +DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 231 ERGVTMDIGRTSFETSHRRIVL--LDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 288
Query: 364 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 501
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK
Sbjct: 289 GFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIK 332
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 180 bits (439), Expect = 7e-46
Identities = 91/166 (54%), Positives = 118/166 (71%), Gaps = 2/166 (1%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ER
Sbjct: 189 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEER 248
Query: 190 ERRYHNRY--CSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 363
ER S E + +++ +DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 249 ERGVTMDIGRTSFETSHRRIVL--LDAPGHKDFISNMITGTSQADAAILVVNATTGEFET 306
Query: 364 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 501
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK
Sbjct: 307 GFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIK 350
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 161 bits (390), Expect = 6e-40
Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 7/199 (3%)
Frame = +1
Query: 1 RHEINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
+ IN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 181 AERER----RYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 348
ERE+ Y E R+ +L DAPGH+ F+ NMI G +QAD AVL+++A
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTIL----DAPGHKSFVPNMIVGANQADLAVLVISARR 222
Query: 349 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEDPHTSRR 528
GEFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ + R+
Sbjct: 223 GEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRK 282
Query: 529 LA---TTQLLSLSCPFLDG 576
L T + + C L G
Sbjct: 283 LGFNPKTDITYVPCSGLTG 301
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 501 EGR-SSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 674
EG+ + +++K+G+NP + +VP SG G + + T W G C I
Sbjct: 273 EGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEG--NWY--------SGPCFI 322
Query: 675 EALDAILP 698
E +D +LP
Sbjct: 323 EFIDVLLP 330
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 125 bits (301), Expect = 4e-29
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 76.6 bits (180), Expect = 2e-14
Identities = 55/154 (35%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 183
+N+ IGH+D GK+T T + + G K KF++ +DK K
Sbjct: 46 VNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDKGKE 88
Query: 184 ERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 363
E++R + + H D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 89 EKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME- 147
Query: 364 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 465
QT+EH +LA +GVK + + +NK D E
Sbjct: 148 ------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 76.6 bits (180), Expect = 2e-14
Identities = 55/154 (35%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 183
+N+ IGH+D GK+T T + + G K KF++ +DK K
Sbjct: 46 VNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDKGKE 88
Query: 184 ERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 363
E++R + + H D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 89 EKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME- 147
Query: 364 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 465
QT+EH +LA +GVK + + +NK D E
Sbjct: 148 ------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 71.7 bits (168), Expect = 5e-13
Identities = 59/164 (35%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 50 LNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLEYET 109
Query: 181 AERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 360
A+R Y HID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 110 AKRH------YA------------HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP 151
Query: 361 AGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 486
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 152 -------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 186
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 71.7 bits (168), Expect = 5e-13
Identities = 59/164 (35%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 51 LNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLEYET 110
Query: 181 AERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 360
A+R Y HID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 111 AKRH------YA------------HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP 152
Query: 361 AGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 486
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 153 -------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 71.7 bits (168), Expect = 5e-13
Identities = 59/164 (35%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 180
+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 51 LNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLEYET 110
Query: 181 AERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 360
A+R Y HID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 111 AKRH------YA------------HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP 152
Query: 361 AGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 486
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 153 -------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.4 bits (110), Expect = 5e-06
Identities = 45/148 (30%), Positives = 66/148 (44%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 193 RRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 372
R + + +R+ L ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 373 KNGQTREHALLAFTLGVKQLIVGVNKMD 456
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA ++I
Sbjct: 77 IDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRVI 129
Query: 436 VGVNKMDSTEPPYSEPRFEEIKK 504
+ +NK D E ++++K
Sbjct: 130 IVLNKCDLAEKSKISESAKKVRK 152
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 42/148 (28%), Positives = 60/148 (40%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 193 RRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 372
R + + V ID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 373 KNGQTREHALLAFTLGVKQLIVGVNKMD 456
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 36.7 bits (81), Expect = 0.016
Identities = 35/113 (30%), Positives = 48/113 (42%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 193 RRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 351
R + ++ + ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/67 (38%), Positives = 31/67 (46%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
+D PGH F G AD VL+VAA G E QT + A V QL+
Sbjct: 209 LDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLV 260
Query: 436 VGVNKMD 456
V VNK+D
Sbjct: 261 VAVNKID 267
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 35.9 bits (79), Expect = 0.029
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 165
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 166 LDKLKAERERRYHNRYCSLEVRN*Q-----VLCYHIDAPGHRDFIKNMITGTSQADCAVL 330
L+K E + N++ ++EV + L ID+PGH DF + D A++
Sbjct: 81 LEKKDLEFVKG-ENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALV 139
Query: 331 IVAAGTG 351
+V +G
Sbjct: 140 VVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 35.5 bits (78), Expect = 0.038
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Frame = +1
Query: 13 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 165
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 166 LDKLKAERERRYHNRYCSLEVRN*Q-----VLCYHIDAPGHRDFIKNMITGTSQADCAVL 330
L+K E + N++ ++EV + L ID+PGH DF + D A++
Sbjct: 81 LEKKDLEFVKG-ENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALV 139
Query: 331 IVAAGTG 351
+V +G
Sbjct: 140 VVDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 34.7 bits (76), Expect = 0.066
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
+D PGH + M+ G + D A L+VA QT EH + + L+
Sbjct: 132 VDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQLNHLM 185
Query: 436 VGVNKMDSTEPPYSEPRFEEI 498
+ NK+D + + +E+I
Sbjct: 186 ILQNKVDIIKESQARENYEQI 206
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 449 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 321
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
ID PGH F G+S D A+L+V + G+ QT E +L G +
Sbjct: 554 IDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPFV 605
Query: 436 VGVNKMDSTEPPYSEPR---FEEIKKEDP 513
+ +NK+D S PR +E +K + P
Sbjct: 606 IALNKIDRLYEYESNPRKDVYELLKSQKP 634
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/111 (23%), Positives = 47/111 (42%)
Frame = +1
Query: 4 HEINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 183
H N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MDSRED 63
Query: 184 ERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIV 336
E+ R + + + +L ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/111 (23%), Positives = 47/111 (42%)
Frame = +1
Query: 4 HEINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 183
H N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MDSRED 63
Query: 184 ERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIV 336
E+ R + + + +L ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 91 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 91 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 192
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 511 PHTSRRLATTQLLSLSCPFLD 573
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 511 PHTSRRLATTQLLSLSCPFLD 573
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 511 PHTSRRLATTQLLSLSCPFLD 573
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 511 PHTSRRLATTQLLSLSCPFLD 573
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.1 bits (62), Expect = 3.3
Identities = 44/156 (28%), Positives = 61/156 (39%), Gaps = 6/156 (3%)
Frame = +1
Query: 7 EINIVVIGHVDSGKSTTTGHLIYKC----GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 174
E+ + V+G D GKST G L C G + I +F E + GK S V+
Sbjct: 168 EVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIFRFPHEVR-TGKTSSVCNDVIGF 226
Query: 175 LKAERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTS--QADCAVLIVAAGT 348
+ Y V L ID G + K I G + A L+VAA
Sbjct: 227 DNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA-- 284
Query: 349 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 456
+ GI+ TREH L L + ++ + KMD
Sbjct: 285 ---DRGIT--WATREHLGLIAALNIPMFVL-ITKMD 314
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTT 60
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical
protein ZK673.4 protein.
Length = 476
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 478 EPRFEEIKKEDPHTSRRLATTQLLSLSCPF 567
EP FEE E P TS +AT + + PF
Sbjct: 353 EPEFEEHFDEQPSTSSYMATATATATATPF 382
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,383,549
Number of Sequences: 27780
Number of extensions: 381424
Number of successful extensions: 1212
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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