Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20030
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 293 8e-82
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 288 4e-80
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 188 3e-50
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 173 1e-45
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 31 0.008
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 2.9
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 6.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.8
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 293 bits (720), Expect = 8e-82
Identities = 145/166 (87%), Positives = 147/166 (88%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 190 ERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 369
ER + + IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI
Sbjct: 68 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 127
Query: 370 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 128 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKE 173
Score = 134 bits (325), Expect = 6e-34
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 689
SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDA
Sbjct: 175 SSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDA 234
Query: 690 ILPP 701
ILPP
Sbjct: 235 ILPP 238
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 288 bits (706), Expect = 4e-80
Identities = 142/166 (85%), Positives = 145/166 (87%)
Frame = +1
Query: 10 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 189
INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER
Sbjct: 8 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 67
Query: 190 ERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 369
ER + + IDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGI
Sbjct: 68 ERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGI 127
Query: 370 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
SKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKE
Sbjct: 128 SKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKE 173
Score = 126 bits (305), Expect = 2e-31
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 689
SSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+G ADGK LIEALDA
Sbjct: 175 SSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDA 234
Query: 690 ILPPA 704
ILPP+
Sbjct: 235 ILPPS 239
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 188 bits (459), Expect = 3e-50
Identities = 95/116 (81%), Positives = 97/116 (83%)
Frame = +1
Query: 160 WVLDKLKAERERRYHNRYCSLEVRN*QVLCYHIDAPGHRDFIKNMITGTSQADCAVLIVA 339
WVLDKLKAERER + + IDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 340 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 507
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKE 116
Score = 134 bits (325), Expect = 6e-34
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 689
SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDA
Sbjct: 118 SSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDA 177
Query: 690 ILPP 701
ILPP
Sbjct: 178 ILPP 181
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 173 bits (422), Expect = 1e-45
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI
Sbjct: 17 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 76
Query: 436 VGVNKMDSTEPPYSEPRFEEIKKE 507
VGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 77 VGVNKMDSTEPPYSETRFEEIKKE 100
Score = 134 bits (325), Expect = 6e-34
Identities = 59/64 (92%), Positives = 61/64 (95%)
Frame = +3
Query: 510 SSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 689
SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDA
Sbjct: 102 SSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDA 161
Query: 690 ILPP 701
ILPP
Sbjct: 162 ILPP 165
Score = 37.5 bits (83), Expect = 1e-04
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 209 DIALWKFETSKYYVTTL 259
DIALWKFETSKYYVT +
Sbjct: 1 DIALWKFETSKYYVTII 17
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 31.5 bits (68), Expect = 0.008
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +1
Query: 256 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 435
+D PGH FI G D VL+VAA G E QT + +A V +I
Sbjct: 198 LDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV-PII 249
Query: 436 VGVNKMDSTEPPYSEPRFEEIK 501
V +NK+D + ++E K
Sbjct: 250 VAINKIDKPNIDIIKVQYELAK 271
Score = 25.0 bits (52), Expect = 0.71
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 1 RHEINIVVIGHVDSGKST 54
RH I + ++GHVD GK+T
Sbjct: 144 RHPI-VTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 10 INIVVIGHVDSGKST 54
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 154 YAWVLDKLKAERERRYHNRYCSLEV 228
Y W+ + + +R R+ + RY +LE+
Sbjct: 261 YPWMRSQFERKRGRQTYTRYQTLEL 285
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -2
Query: 529 IFLMYEDLPS*FPQIWAHCMVVQWNPFCLL 440
+ L+ LP IW+H V FC++
Sbjct: 100 LLLLISGLPPEIYYIWSHFPYVFGEAFCII 129
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 608 FG*RLQHVVSVPSRNGHESDSSWV 537
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,744
Number of Sequences: 438
Number of extensions: 4717
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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