Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20029
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 2e-32
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 73 2e-13
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 48 8e-06
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 47 1e-05
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 47 1e-05
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 44 2e-04
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 44 2e-04
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 42 7e-04
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 42 7e-04
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 38 0.006
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 38 0.008
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 36 0.043
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 36 0.043
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 36 0.043
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 34 0.100
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 33 0.23
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 30 2.1
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_55747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_28158| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0) 29 3.7
SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 29 3.7
SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 29 3.7
SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_32456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_3124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 28 8.6
SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7) 28 8.6
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 136 bits (328), Expect = 2e-32
Identities = 58/85 (68%), Positives = 71/85 (83%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+F++A+E EEWK +TLCDLYDTL+I QAVIFCNT+RKVDWLTE M +FTV++MHGDM
Sbjct: 212 QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVASMHGDMP 271
Query: 188 QREREVIMRQFRTGSSRVLITTVYW 262
Q+ERE IM+ FR G SRVLI+T W
Sbjct: 272 QKEREAIMKDFRAGQSRVLISTDVW 296
Score = 74.9 bits (176), Expect = 6e-14
Identities = 39/74 (52%), Positives = 45/74 (60%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
ARG+DVQQVS VINYDLP+NRE Y NFV D R L+DIE +Y
Sbjct: 297 ARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYS 356
Query: 442 TSIVEMPSDVANLI 483
T I EMP +VA+LI
Sbjct: 357 TQIDEMPMNVADLI 370
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 128 bits (310), Expect = 3e-30
Identities = 55/82 (67%), Positives = 71/82 (86%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+F++ +E E+WKL+TLCDLY+TL+I QAVIF NTRRKVDWL M +D TVS+MHGDM
Sbjct: 306 QFFVLVEKEDWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMS 365
Query: 188 QREREVIMRQFRTGSSRVLITT 253
Q+ER++IM++FR+GSSRVLITT
Sbjct: 366 QKERDIIMKEFRSGSSRVLITT 387
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENY 333
LLARGIDV QVS VINYDLPSNRENY
Sbjct: 389 LLARGIDVHQVSLVINYDLPSNRENY 414
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
++Y+ + E K E LC++Y LSI Q V+FC+TRR WL E M V+ + G++
Sbjct: 320 QYYVVCKNSEDKFEALCNMYGVLSIGQCVVFCHTRRNAAWLAEKMVKEGHAVALLSGEIT 379
Query: 188 QREREVIMRQFRTGSSRVLITT 253
+R ++ +FR G ++LITT
Sbjct: 380 IEQRIAVLERFRLGKEKLLITT 401
Score = 35.1 bits (77), Expect = 0.057
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRE 327
ARGIDV+QV+ VINYD+P + +
Sbjct: 405 ARGIDVEQVTLVINYDMPMDMQ 426
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +2
Query: 5 TRFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDM 184
T++Y +E E+ K+ L L+ L I Q++IFCN+ ++V+ L + F+ +H M
Sbjct: 267 TQYYAFVE-EKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARM 325
Query: 185 DQREREVIMRQFRTGSSRVLI 247
Q R + FR G R L+
Sbjct: 326 SQSHRNRVFHDFRQGHCRNLV 346
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 32/70 (45%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
L RGID+Q V+ VIN+D P N E Y N +T DR L IE+
Sbjct: 350 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENE 409
Query: 436 YHTSIVEMPS 465
T I +PS
Sbjct: 410 LDTEIKPIPS 419
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +2
Query: 5 TRFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDM 184
T++Y +E E+ K+ L L+ L I Q++IFCN+ ++V+ L + F+ +H M
Sbjct: 267 TQYYAFVE-EKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARM 325
Query: 185 DQREREVIMRQFRTGSSRVLI 247
Q R + FR G R L+
Sbjct: 326 SQSHRNRVFHDFRQGHCRNLV 346
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 32/70 (45%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
L RGID+Q V+ VIN+D P N E Y N +T DR L IE+
Sbjct: 350 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENE 409
Query: 436 YHTSIVEMPS 465
T I +PS
Sbjct: 410 LDTEIKPIPS 419
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVT-EADRRALKDIED 432
L RG+D+++V+ V NYD+P + + Y FV+ EAD + L +++D
Sbjct: 394 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQD 453
Query: 433 FYHTSIVEMPSDV 471
+ ++ E+P ++
Sbjct: 454 RFEVNVGELPDEI 466
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 32/70 (45%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
L RGID+Q V+ VIN+D P N E Y N +T DR L IE+
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENE 61
Query: 436 YHTSIVEMPS 465
T I +PS
Sbjct: 62 LDTEIKPIPS 71
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/70 (37%), Positives = 32/70 (45%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
L RGID+Q V+ VIN+D P N E Y N +T DR L IE+
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENE 61
Query: 436 YHTSIVEMPS 465
T I +PS
Sbjct: 62 LDTEIKPIPS 71
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 71 TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLIT 250
+L + Q +IF + VD + E + L+ A+HGD Q ER +R+F G+ VL+
Sbjct: 84 SLDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVA 143
Query: 251 T 253
T
Sbjct: 144 T 144
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENY 333
++G+D + VIN+D+P + ENY
Sbjct: 148 SKGLDFPDIQHVINFDMPEDIENY 171
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 71 TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLIT 250
+L + Q +IF + VD + E + L+ A+HGD Q ER +R+F G+ VL+
Sbjct: 84 SLDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVA 143
Query: 251 T 253
T
Sbjct: 144 T 144
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENY 333
++G+D + VIN+D+P + ENY
Sbjct: 148 SKGLDFPDIQHVINFDMPEDIENY 171
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +2
Query: 74 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
+S +IF + + L ++ DF V+ +HGDMDQ ER ++ QF+ +L+ T
Sbjct: 727 ISAGSVLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVAT 786
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 KLETLCDLYDTLSIAQ-AVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 217
K L DL + Q ++F T++ D L + + +++HGD QRERE +R
Sbjct: 1086 KRSFLLDLLNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSIHGDRSQREREEALRT 1145
Query: 218 FRTGSSRVLITT 253
FR G + +L+ T
Sbjct: 1146 FRCGDTPILVAT 1157
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
ARG+D+ V VIN+DLP++ E Y +F ++ K++ D
Sbjct: 1161 ARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRVGHTGLATSFFNHKNKNVAKELMDILE 1220
Query: 442 TSIVEMPS 465
S E+PS
Sbjct: 1221 ESKQEIPS 1228
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2
Query: 86 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
+ +IF T+++ + L + L+ T +HGD+ Q++REV ++ FR G R L+ T
Sbjct: 307 RTMIFAQTKKEANELALNSVLKQET-QVLHGDIPQKQREVTLKSFREGKFRCLVAT 361
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVT-EADRRALKDIED 432
L RG+D+++V+ V NYD+P + + Y FV+ EAD + L +++D
Sbjct: 21 LFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQD 80
Query: 433 FYHTSI 450
+ ++
Sbjct: 81 RFEVNV 86
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 41 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 220
K + L + + ++F ++R D+L + F +++HGD Q+ERE + F
Sbjct: 949 KRDRLTQILGDAGTDRTLVFVESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDF 1008
Query: 221 RTGSSRVLITT 253
R G VLI T
Sbjct: 1009 RKGRCPVLIAT 1019
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENY 333
ARG+D+ V VIN+DLPS+ + Y
Sbjct: 1023 ARGLDIDDVKHVINFDLPSDIDEY 1046
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 41 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQF 220
K + L + T ++F ++ + VD++TE + F S +H + Q R +++ F
Sbjct: 319 KPQKLLETLRTTPYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAF 378
Query: 221 RTGSSRVLITT 253
R G +L+ T
Sbjct: 379 RDGKVDILVAT 389
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENY 333
+RG+D +V+ VINYDLP E Y
Sbjct: 393 SRGLDFPEVTHVINYDLPDTIECY 416
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEA-DRRALKDIED 432
L ARGID + V+ V+N D+P N E Y +V + R L+DIE
Sbjct: 273 LTARGIDAENVNLVVNMDVPHNGETYLHRIGRAGRFGTEGMAVTYVANGKEERELRDIER 332
Query: 433 FYHTSIVEMPSDVANLI 483
+ +P+ + + +
Sbjct: 333 SIDVKMELLPAHIPDTL 349
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 32 EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 211
E KL + D+ +IF ++ + L + V +H D Q +R+ I+
Sbjct: 367 ESGKLLAVRDIVQKGFTPPVLIFVQSKDRAKELFHELIYDGINVDVIHSDRTQAQRDNIV 426
Query: 212 RQFRTGSSRVLITT 253
+ FRTG VLI T
Sbjct: 427 KSFRTGKIWVLIAT 440
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENY 333
L+ RGID + V+ VINYD P++ Y
Sbjct: 442 LMGRGIDFKGVNLVINYDFPTSAVAY 467
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 35.5 bits (78), Expect = 0.043
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 265 RGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYHT 444
RGID++ VS VINYD+ E+Y +F+T++D D++ +
Sbjct: 346 RGIDIKDVSHVINYDMAKTIEDYTHRIGRTGRAGKTGIAVSFLTQSDSGVFYDLKQLLLS 405
Query: 445 S 447
S
Sbjct: 406 S 406
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 149 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
+ F + +HG +Q +RE + + GS +L+ T
Sbjct: 307 KKFRATTLHGGRNQEQREFALSSLKGGSKDILVAT 341
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
+RG+D+ QV V+N ++P++ ++Y + VT+ D +K IE+ +
Sbjct: 308 SRGLDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVTQYDIDRVKKIEEKIN 367
Query: 442 TSIVE 456
T + E
Sbjct: 368 TKLTE 372
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 34.3 bits (75), Expect = 0.100
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 41 KLETLCDLY--DTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDM 184
K E + +L D+ S Q ++FCN+ DWL + + ++ +HG++
Sbjct: 639 KAERIVELLKKDSKSPGQTIVFCNSASSCDWLARHLEQHNLSLIRLHGNI 688
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENY 333
+ +RG+D VS VIN+D P++ +Y
Sbjct: 755 IASRGLDTSDVSHVINFDFPNSMVDY 780
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 146 LRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
L V A+H +D E++++M +F G S+VLI+T
Sbjct: 90 LAGLRVEALHSRLDSSEKDLVMDRFIKGESQVLIST 125
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRA 414
+RG+D++ ++ VINYD P + E+Y F++ D R+
Sbjct: 103 SRGLDIKDITYVINYDFPRHIEDYVHRVGRTGRAGRSGTSLTFISREDWRS 153
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSN 321
++ARG+D+ +V+ VI YD PS+
Sbjct: 149 VMARGVDIPEVNWVIQYDPPSS 170
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 86 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
+ ++F NT V LT + L +H M QR+R + +F+ ++ +L+ T
Sbjct: 458 RTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLAT 513
>SB_55747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 68 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 157
+T +A+ + FC T RK+DW + + DF
Sbjct: 8 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 37
>SB_28158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 68 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 157
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0)
Length = 1559
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 68 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 157
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_47833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 68 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 157
+T +A+ + FC T RK+DW + + DF
Sbjct: 87 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 116
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 253 CLLARGIDVQQVSCVINYDLPSNRENY 333
C L G+D+ V +I++ +PS E+Y
Sbjct: 319 CALGMGVDIPDVDHIIHFGIPSEVEHY 345
>SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 785
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 68 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 157
+T +A+ + FC T RK+DW + + DF
Sbjct: 287 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 316
>SB_27380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 68 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 157
+T +A+ + FC T RK+DW + + DF
Sbjct: 8 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 37
>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1455
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 68 DTLSIAQAVIFCNTRRKVDWLTESMHLRDF 157
+T +A+ + FC T RK+DW + + DF
Sbjct: 51 ETSVLARGLTFCPTPRKIDWSQVNADIYDF 80
>SB_32456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 500 FRFYSVSCVLLRYL*G--VCIRTRLLTT*HCRIFIGTYFIWTDIFILDLINEYTI 658
FRF+ V+ VL L G V + T + ++F+ YF+ ++ I +LIN TI
Sbjct: 23 FRFFLVALVLSASLVGNAVVVHTAITARQQTKVFL--YFLVANLSIAELINTCTI 75
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 134 ESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSS-RVLITT 253
E M LR S G M QRE+E ++ +FR GS ++I T
Sbjct: 583 ELMPLRLVGNSDGRGGMTQREQEEVIAKFRAGSECNIIIAT 623
>SB_3124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 439 HTSIVEMPSDVANLI*GAYIFPILFCVLRSIAIF 540
H I +P DV L G IF ILF +L + +F
Sbjct: 411 HERIDSLPHDVDRLFAGTLIFTILFFLLPTTTLF 444
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 324 TVGWQIIVDDAGNLLYINTTCQ*TVVIKT 238
T G I++ GN +INT C T VI T
Sbjct: 1040 TAGNSTIINTTGNPTFINTLCNSTFVIAT 1068
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 194 EREVIMRQFRTGSSRVLITT 253
E+EVI++ FRTG ++LI+T
Sbjct: 605 EQEVILKSFRTGRIKLLIST 624
>SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7)
Length = 325
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 60 TCMIHCLLHKL*FSATPVARWIG 128
T + C+L + FSA P +RW+G
Sbjct: 281 TARVSCMLQREMFSAFPCSRWLG 303
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,298,254
Number of Sequences: 59808
Number of extensions: 434876
Number of successful extensions: 884
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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