Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20029
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 128 4e-30
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 128 4e-30
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 123 1e-28
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 123 1e-28
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 87 9e-18
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 85 6e-17
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 68 8e-12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 68 8e-12
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 51 9e-07
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 46 2e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 45 6e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 43 2e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 43 2e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 43 2e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 43 2e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 43 2e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 43 3e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 41 0.001
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 39 0.003
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 39 0.003
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 37 0.012
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 37 0.012
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 36 0.022
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 36 0.022
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 36 0.022
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 35 0.066
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.088
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 34 0.088
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 34 0.088
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 33 0.20
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 33 0.20
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 32 0.35
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 31 0.62
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 31 0.82
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 31 0.82
Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 30 1.4
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 30 1.4
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 3.3
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 28 5.8
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 28 7.6
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 28 7.6
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 128 bits (309), Expect = 4e-30
Identities = 52/85 (61%), Positives = 73/85 (85%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+F++A++ EEWK +TL DLYDTL+I QAV+FCNTRRKVDWLT+ M +FTVS+MHGDM+
Sbjct: 241 QFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDME 300
Query: 188 QREREVIMRQFRTGSSRVLITTVYW 262
Q++R+ +M++FR G++RVLI+T W
Sbjct: 301 QKDRDEVMKEFRAGTTRVLISTDVW 325
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
ARG+DV QVS VINYDLP+NRE Y NFV + D R L+DIE +Y
Sbjct: 326 ARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYS 385
Query: 442 TSIVEMPSDVANLI 483
T I EMP ++A++I
Sbjct: 386 TQIDEMPMNIADII 399
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 128 bits (309), Expect = 4e-30
Identities = 52/85 (61%), Positives = 73/85 (85%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+F++A++ EEWK +TL DLYDTL+I QAV+FCNTRRKVDWLT+ M +FTVS+MHGDM+
Sbjct: 241 QFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDME 300
Query: 188 QREREVIMRQFRTGSSRVLITTVYW 262
Q++R+ +M++FR G++RVLI+T W
Sbjct: 301 QKDRDEVMKEFRAGTTRVLISTDVW 325
Score = 72.1 bits (169), Expect = 4e-13
Identities = 36/74 (48%), Positives = 45/74 (60%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
ARG+DV QVS VINYDLP+NRE Y NFV + D R L+DIE +Y
Sbjct: 326 ARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYS 385
Query: 442 TSIVEMPSDVANLI 483
T I EMP ++A++I
Sbjct: 386 TQIDEMPMNIADII 399
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 123 bits (296), Expect = 1e-28
Identities = 54/82 (65%), Positives = 67/82 (81%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+FYI ++ +EWK + LCDLY+ +++ QAVIFCNTRRKVD LTE M FTVS +HGDMD
Sbjct: 244 QFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMD 303
Query: 188 QREREVIMRQFRTGSSRVLITT 253
Q ER+ IMR+FR+GSSRVLITT
Sbjct: 304 QAERDTIMREFRSGSSRVLITT 325
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
+LARGIDVQQVS VINYDLPSNRENY NFVTE D R LK+IE +
Sbjct: 327 ILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESY 386
Query: 436 YHTSIVEMPSDVANLI 483
Y T I EMP +A+LI
Sbjct: 387 YTTQIEEMPESIADLI 402
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 123 bits (296), Expect = 1e-28
Identities = 54/82 (65%), Positives = 67/82 (81%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+FYI ++ +EWK + LCDLY+ +++ QAVIFCNTRRKVD LTE M FTVS +HGDMD
Sbjct: 244 QFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMD 303
Query: 188 QREREVIMRQFRTGSSRVLITT 253
Q ER+ IMR+FR+GSSRVLITT
Sbjct: 304 QAERDTIMREFRSGSSRVLITT 325
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
+LARGIDVQQVS VINYDLPSNRENY NFVTE D R LK+IE +
Sbjct: 327 ILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESY 386
Query: 436 YHTSIVEMPSDVANLI 483
Y T I EMP +A+LI
Sbjct: 387 YTTQIEEMPESIADLI 402
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 87.4 bits (207), Expect = 9e-18
Identities = 44/76 (57%), Positives = 49/76 (64%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
+LARGIDVQQVS VINYDLPSNRENY NFVTE D R LK+IE +
Sbjct: 40 ILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESY 99
Query: 436 YHTSIVEMPSDVANLI 483
Y T I EMP +A+LI
Sbjct: 100 YTTQIEEMPESIADLI 115
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2
Query: 155 FTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
FTVS +HGDMDQ ER+ IMR+FR+GSSRVLITT
Sbjct: 6 FTVSCLHGDMDQAERDTIMREFRSGSSRVLITT 38
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 84.6 bits (200), Expect = 6e-17
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+FYI ++ +EWK LCDL T QA+IFCNTRR+V LTE + VS HG+M+
Sbjct: 203 QFYINVQKDEWKFNCLCDLLKTSRETQALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNME 262
Query: 188 QREREVIMRQFRTGSSRVLITT 253
ERE +++ F + ++RVL+TT
Sbjct: 263 HNEREDMVKDFNSRNTRVLVTT 284
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
L+ARG+++++ S +INYD+ N ENY +F TE D LK IE+
Sbjct: 286 LMARGMNIRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENH 344
Query: 436 YHTSIVEMP 462
Y T I EMP
Sbjct: 345 YSTRIEEMP 353
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 67.7 bits (158), Expect = 8e-12
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+FY+ + K + +LY L++A +VIFC+T+ V WL E+M R V +HGDM
Sbjct: 431 QFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMT 490
Query: 188 QREREVIMRQFRTGSSRVLITT 253
ER + F+ G +VLITT
Sbjct: 491 VVERADTIIHFKRGDFKVLITT 512
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLP 315
+ ARGIDV QVS VINYDLP
Sbjct: 514 VFARGIDVAQVSVVINYDLP 533
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 67.7 bits (158), Expect = 8e-12
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+FY+ + K + +LY L++A +VIFC+T+ V WL E+M R V +HGDM
Sbjct: 456 QFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMT 515
Query: 188 QREREVIMRQFRTGSSRVLITT 253
ER + F+ G +VLITT
Sbjct: 516 VVERADTIIHFKRGDFKVLITT 537
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLP 315
+ ARGIDV QVS VINYDLP
Sbjct: 539 VFARGIDVAQVSVVINYDLP 558
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 67.7 bits (158), Expect = 8e-12
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2
Query: 8 RFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMD 187
+FY+ + K + +LY L++A +VIFC+T+ V WL E+M R V +HGDM
Sbjct: 840 QFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMWLYENMRARGHQVDVLHGDMT 899
Query: 188 QREREVIMRQFRTGSSRVLITT 253
ER + F+ G +VLITT
Sbjct: 900 VVERADTIIHFKRGDFKVLITT 921
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLP 315
+ ARGIDV QVS VINYDLP
Sbjct: 923 VFARGIDVAQVSVVINYDLP 942
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 50.8 bits (116), Expect = 9e-07
Identities = 27/72 (37%), Positives = 33/72 (45%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
LL RGID+Q V+ VIN+D P N E Y N +T DR L+ IE
Sbjct: 339 LLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQE 398
Query: 436 YHTSIVEMPSDV 471
T I +P V
Sbjct: 399 LRTRIEPIPKTV 410
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +2
Query: 2 GTRFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGD 181
G Y A E+ K+ L L+ L I Q++IFCN+ ++V+ L + + ++ +H
Sbjct: 254 GVTQYYAFVQEKQKVHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSK 313
Query: 182 MDQREREVIMRQFRTGSSRVLI 247
M Q R + FR G+ R L+
Sbjct: 314 MAQNHRNRVFHDFRQGNCRNLV 335
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +2
Query: 86 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
+ +IF T+RK D LT +M + +HGD +Q ER+ ++++F+ G + +++ T
Sbjct: 378 KTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLAT 433
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDI 426
ARG+DV + VINYD P+N E+Y F T + KD+
Sbjct: 437 ARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDL 491
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVT-EADRRALKDIED 432
L RG+D+++V+ V NYD+P + ++Y FV+ E D + L ++D
Sbjct: 342 LFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQD 401
Query: 433 FYHTSIVEMPS--DVANLI*G 489
+ SI E+P DV+ I G
Sbjct: 402 RFDISITELPEKIDVSTYIEG 422
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 14 YIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQR 193
Y+ ++ E K L +L D L Q VIF ++ + L + + ++F A+H M Q
Sbjct: 262 YVKLKEAE-KNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQE 320
Query: 194 EREVIMRQFRTGSSRVLITT 253
ER + F+ R+L+ T
Sbjct: 321 ERLSRYQAFKDFQKRILVAT 340
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVT-EADRRALKDIED 432
L RG+D+++V+ V NYD+P + ++Y FV+ E D + L ++D
Sbjct: 334 LFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQD 393
Query: 433 FYHTSIVEMPS--DVANLI*G 489
+ SI E+P DV+ I G
Sbjct: 394 RFDISITELPEKIDVSTYIEG 414
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 14 YIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQR 193
Y+ ++ E K L +L D L Q VIF ++ + L + + ++F A+H M Q
Sbjct: 254 YVKLKEAE-KNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQE 312
Query: 194 EREVIMRQFRTGSSRVLITT 253
ER + F+ R+L+ T
Sbjct: 313 ERLSRYQAFKDFQKRILVAT 332
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 32 EEWKLETLCDLYD-TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVI 208
E+ K L DL D T + ++F T+R L ++ +++ V +HGD+ Q ERE
Sbjct: 410 EDEKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKH 469
Query: 209 MRQFRTGSSRVLITT 253
+ FRTG++ +L+ T
Sbjct: 470 LDLFRTGTAPILVAT 484
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
ARG+D+ V VINYDLPS+ + Y +F + +R +++ D
Sbjct: 488 ARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLIV 547
Query: 442 TSIVEMP 462
+ E+P
Sbjct: 548 EANQELP 554
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 17 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 196
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 589 LGIDIDSYTTEKSAEVYTK----KTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 644
Query: 197 REVIMRQFRTGSSRVLITT 253
R +RQFR GS VLI T
Sbjct: 645 RSEALRQFRNGSKPVLIAT 663
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 265 RGIDVQQVSCVINYDLPSNRENY 333
RG+D++ V VINYD+P N ++Y
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDY 690
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 17 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 196
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 800 LGIDIDSYTTEKNSEVYTK----KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Query: 197 REVIMRQFRTGSSRVLITT 253
R +RQFR GS VLI T
Sbjct: 856 RSEALRQFRNGSKPVLIAT 874
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 265 RGIDVQQVSCVINYDLPSNRENY 333
RG+D++ V VINYD+P N ++Y
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDY 901
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 17 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 196
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 800 LGIDIDSYTTEKNSEVYTK----KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Query: 197 REVIMRQFRTGSSRVLITT 253
R +RQFR GS VLI T
Sbjct: 856 RSEALRQFRNGSKPVLIAT 874
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 265 RGIDVQQVSCVINYDLPSNRENY 333
RG+D++ V VINYD+P N ++Y
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDY 901
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 17 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 196
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 589 LGIDIDSYTTEKSAEVYTK----KTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 644
Query: 197 REVIMRQFRTGSSRVLITT 253
R +RQFR GS VLI T
Sbjct: 645 RSEALRQFRNGSKPVLIAT 663
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 265 RGIDVQQVSCVINYDLPSNRENY 333
RG+D++ V VINYD+P N ++Y
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDY 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 17 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 196
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 800 LGIDIDSYTTEKNSEVYTK----KTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Query: 197 REVIMRQFRTGSSRVLITT 253
R +RQFR GS VLI T
Sbjct: 856 RSEALRQFRNGSKPVLIAT 874
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 265 RGIDVQQVSCVINYDLPSNRENY 333
RG+D++ V VINYD+P N ++Y
Sbjct: 879 RGLDIKGVDHVINYDMPDNIDDY 901
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 17 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 196
+ I+++ + E ++Y + ++F + R D L + +HG +QRE
Sbjct: 589 LGIDIDSYTTEKSAEVYTK----KTMVFVSQRAMADILASILSSAQVPAITIHGAREQRE 644
Query: 197 REVIMRQFRTGSSRVLITT 253
R +RQFR GS VLI T
Sbjct: 645 RSEALRQFRNGSKPVLIAT 663
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1
Query: 265 RGIDVQQVSCVINYDLPSNRENY 333
RG+D++ V VINYD+P N ++Y
Sbjct: 668 RGLDIKGVDHVINYDMPDNIDDY 690
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 226 WLFSCLDHHCLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEAD 405
W+ C + LL RG+D+ V VINYDLP++ +Y + T+AD
Sbjct: 427 WVLVCTE---LLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFTDAD 483
Query: 406 RRALKDIEDFYHTSIVEMP 462
+ +K I S ++P
Sbjct: 484 MKYIKSIATVIRQSGFDVP 502
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 74 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLI 247
L + +A++FC T+++ D + + + + + +HGD ER+ + F+ G R L+
Sbjct: 503 LQMDKAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFLV 560
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/74 (24%), Positives = 39/74 (52%)
Frame = +2
Query: 32 EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIM 211
E+ K + L ++ ++ +IF N ++ D L++ + F + +HG Q +RE +
Sbjct: 557 EDRKRKKLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYAL 616
Query: 212 RQFRTGSSRVLITT 253
+ + G+S +L+ T
Sbjct: 617 QALKEGTSDILVAT 630
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 265 RGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIED-FYH 441
RGIDV+ VS V+NYD+ + E+Y F+T D D++
Sbjct: 635 RGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVE 694
Query: 442 TSIVEMPSDVAN 477
+ + P ++AN
Sbjct: 695 SPVSSCPPELAN 706
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +2
Query: 17 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 196
+ I+++ + E D++ + + ++F ++ D L M +HG +Q+E
Sbjct: 546 LGIDIDTYTTEKNSDVF----VKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKE 601
Query: 197 REVIMRQFRTGSSRVLITT 253
R ++ FR+G+ VLI T
Sbjct: 602 RSAALKLFRSGAKPVLIAT 620
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEAD 405
++ RG+D++ V VINYD+P+N ++Y +F++ AD
Sbjct: 622 VVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/79 (24%), Positives = 39/79 (49%)
Frame = +2
Query: 17 IAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQRE 196
+ I+++ + E D++ + + ++F ++ D L M +HG +Q+E
Sbjct: 546 LGIDIDTYTTEKNSDVF----VKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKE 601
Query: 197 REVIMRQFRTGSSRVLITT 253
R ++ FR+G+ VLI T
Sbjct: 602 RSAALKLFRSGAKPVLIAT 620
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEAD 405
++ RG+D++ V VINYD+P+N ++Y +F++ AD
Sbjct: 622 VVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/65 (27%), Positives = 37/65 (56%)
Frame = +2
Query: 59 DLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSR 238
+L + S+ + +IF + + + + + ++DF + +HGDM Q ER + +FR S+
Sbjct: 504 NLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFRK-KSQ 562
Query: 239 VLITT 253
+L+ T
Sbjct: 563 ILVAT 567
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIE 429
ARG+D+ V VINYD+PS ++Y VT+ D A + IE
Sbjct: 344 ARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIE 399
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/56 (26%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 AVIFCNTRRKVDWLTESMHLRDF-TVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
+++F + + K D + + + + +V+ +HG +DQ +R+ + F+TG +VL+ T
Sbjct: 554 SIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVAT 609
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENY 333
ARG+DV+ + V+NYD P++ E+Y
Sbjct: 613 ARGLDVKNLILVVNYDCPNHYEDY 636
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
ARG+D+ V VINYDLP + + Y +F + +R +D+++
Sbjct: 459 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIV 518
Query: 442 TSIVEMP 462
S E+P
Sbjct: 519 ESNQEVP 525
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2
Query: 92 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
++F T+R + L ++ + ++HGD+ Q ERE + FR+G +L+ T
Sbjct: 402 LVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVAT 455
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
ARG+D+ V VINYDLP + + Y +F + +R +D+++
Sbjct: 443 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIV 502
Query: 442 TSIVEMP 462
S E+P
Sbjct: 503 ESNQEVP 509
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2
Query: 92 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
++F T+R + L ++ + ++HGD+ Q ERE + FR+G +L+ T
Sbjct: 386 LVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVAT 439
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
ARG+D+ V VINYDLP + + Y +F + +R +D+++
Sbjct: 440 ARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIV 499
Query: 442 TSIVEMP 462
S E+P
Sbjct: 500 ESNQEVP 506
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2
Query: 92 VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
++F T+R + L ++ + ++HGD+ Q ERE + FR+G +L+ T
Sbjct: 383 LVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVAT 436
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +2
Query: 53 LCDLYDTLSIAQA-----VIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 217
+C++ + L+ A +IF ++ D L+ ++ +HG Q +RE+ +
Sbjct: 324 VCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNM 383
Query: 218 FRTGSSRVLITT 253
R+G ++L+ T
Sbjct: 384 LRSGEVQILVAT 395
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDF 435
L +RGIDV ++ V+NYD P + E Y +F+ DR + +
Sbjct: 397 LASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQI 456
Query: 436 YHTSIVEMPSDV 471
S E+P +
Sbjct: 457 LEKSEQEVPDQL 468
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.088
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSN 321
+LARG D+ +V CVINY+LP++
Sbjct: 458 VLARGTDLNKVDCVINYNLPAD 479
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 34.3 bits (75), Expect = 0.088
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 86 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
Q V+FC T + V+++ +H S ++ +D R++ +++F + +L+ T
Sbjct: 267 QTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVT 322
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 34.3 bits (75), Expect = 0.088
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 86 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
Q V+FC T + V+++ +H S ++ +D R++ +++F + +L+ T
Sbjct: 267 QTVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVT 322
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 235 SCLDHHCLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRA 414
S LD ++RGID VS V+N+D P + Y +F ++R
Sbjct: 360 SKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAH 419
Query: 415 LKDIED 432
L+ I++
Sbjct: 420 LEQIQE 425
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 235 SCLDHHCLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRA 414
S LD ++RGID VS V+N+D P + Y +F ++R
Sbjct: 427 SKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAH 486
Query: 415 LKDIED 432
L+ I++
Sbjct: 487 LEQIQE 492
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDI 426
L +RG+D++ V VIN ++P + + Y + V E +R+ LK+I
Sbjct: 476 LASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKLLKEI 532
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVT-EADRRALKDIEDFY 438
++G+D Q + VIN+D+P + ENY F+ +++ L D++
Sbjct: 502 SKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLL 561
Query: 439 HTSIVEMP 462
+ E+P
Sbjct: 562 AEAGQELP 569
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENY 333
L ARGID V+ V+N D +N E Y
Sbjct: 318 LTARGIDADNVNLVVNIDAAANEETY 343
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSNRENY 333
L ARGID V+ V+N D +N E Y
Sbjct: 318 LTARGIDADNVNLVVNIDAAANEETY 343
>Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical
protein T09E11.10 protein.
Length = 338
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 104 NTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQ 217
N RK W+T+ ++ V + GD+DQ+ +E++M +
Sbjct: 96 NVLRKT-WMTQRNRIKSIFVIGLGGDVDQKTKELVMSE 132
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLP 315
LL+RGIDV + VIN+DLP
Sbjct: 705 LLSRGIDVSDLDRVINFDLP 724
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/56 (23%), Positives = 25/56 (44%)
Frame = +2
Query: 86 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 253
+ +IF + + D + +HGD Q RE ++ F++ +L+TT
Sbjct: 648 KTIIFVQKKDQCDACAAKLTSGGMLAQTLHGDRSQDMREKLINDFKSNRVNLLVTT 703
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
+RG+D+ V V+N+++P + Y +FVT+ D L+ +E
Sbjct: 398 SRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIG 457
Query: 442 TSIVEM 459
+ E+
Sbjct: 458 KKLDEL 463
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEDFYH 441
+RG+D+ V V+N+++P + Y +FVT+ D L+ +E
Sbjct: 398 SRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIG 457
Query: 442 TSIVEM 459
+ E+
Sbjct: 458 KKLDEL 463
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 235 SCLDHHCLLARGIDVQQVSCVINYDLPSNRENY 333
+CL +L G+DV+Q + VI +D P + +Y
Sbjct: 455 NCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSY 487
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 256 LLARGIDVQQVSCVINYDLPSN 321
++ARGID+ + VI +DLP +
Sbjct: 318 VMARGIDISDIDWVIQFDLPKH 339
>Z46240-2|CAA86311.1| 213|Caenorhabditis elegans Hypothetical
protein B0272.2 protein.
Length = 213
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 110 RRKVDWLTESMHLRDFTVSAMHGDMDQREREVIMR 214
R +VD L +H D VSA+H M QR R R
Sbjct: 68 RMRVDQLRADVHRVDMAVSAVHTRMTQRWRAATER 102
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 41 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 139
KLETLCD+ D + +IFC ++ + S
Sbjct: 134 KLETLCDIIDNCKL--EIIFCENAKRAEGFLSS 164
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENY 333
ARG+D+Q + VI+Y +P E Y
Sbjct: 334 ARGLDIQGIDHVIHYQVPKKVEIY 357
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 262 ARGIDVQQVSCVINYDLPSNRENY 333
ARG+D+Q + VI+Y +P E Y
Sbjct: 501 ARGLDIQGIDHVIHYQVPKKVEIY 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,908,548
Number of Sequences: 27780
Number of extensions: 327924
Number of successful extensions: 789
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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