Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20027
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 33 0.87
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 33 0.87
BC040137-1|AAH40137.1| 1268|Homo sapiens SEC24 related gene fami... 33 0.87
AJ131245-1|CAA10335.1| 1268|Homo sapiens Sec24B protein protein. 33 0.87
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 33 0.87
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 33 0.87
BC039878-1|AAH39878.1| 825|Homo sapiens chromosome 14 open read... 33 1.2
BC009449-1|AAH09449.1| 569|Homo sapiens MGC2641 protein protein. 32 2.7
BC000755-1|AAH00755.1| 670|Homo sapiens hepatoma-derived growth... 32 2.7
AY358600-1|AAQ88963.1| 671|Homo sapiens HGDF-related pro 2 prot... 32 2.7
AF294267-1|AAP97281.1| 671|Homo sapiens hepatoma-derived growth... 32 2.7
AB208892-1|BAD92129.1| 472|Homo sapiens hepatoma-derived growth... 32 2.7
BC000713-1|AAH00713.1| 646|Homo sapiens A kinase (PRKA) anchor ... 31 4.7
AJ243467-1|CAB65092.1| 646|Homo sapiens LA95 protein protein. 31 4.7
AB025905-1|BAA85003.1| 646|Homo sapiens neighbor of A-kinase an... 31 4.7
AB015332-1|BAA34791.1| 373|Homo sapiens HRIHFB2018 protein. 31 4.7
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 33.5 bits (73), Expect = 0.87
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 518 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 697
+KEE S +A+ A P VK + A + + E K+P A +P+ A +PV
Sbjct: 554 AKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKE-----EAKSPAEAKSPEKAKSPV 608
Query: 698 DEDKPADISPDAP-KAEAKSADDLR 769
E+ + +P K EAKS +++
Sbjct: 609 KEEAKSPAEAKSPVKEEAKSPAEVK 633
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 33.5 bits (73), Expect = 0.87
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 518 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 697
+KEE S +A+ A P VK + A + + E K+P A +P+ A +PV
Sbjct: 554 AKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKE-----EAKSPAEAKSPEKAKSPV 608
Query: 698 DEDKPADISPDAP-KAEAKSADDLR 769
E+ + +P K EAKS +++
Sbjct: 609 KEEAKSPAEAKSPVKEEAKSPAEVK 633
>BC040137-1|AAH40137.1| 1268|Homo sapiens SEC24 related gene family,
member B (S. cerevisiae) protein.
Length = 1268
Score = 33.5 bits (73), Expect = 0.87
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 494 STSYRAEISKEEKPSATDAEGSADSAAIIPNMVKKID--LAPTVESDAAAIPEIKTPEAA 667
STS E +E++ + D+ + SA+ +PN ++ P + S +A+ P P+ A
Sbjct: 374 STSDDEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDMLSSSASSP---APDPA 430
Query: 668 DAPKLADNPVDEDKPADISPDAPK 739
P A P PA + P K
Sbjct: 431 PEPDPASAPAPASAPAPVVPQPSK 454
>AJ131245-1|CAA10335.1| 1268|Homo sapiens Sec24B protein protein.
Length = 1268
Score = 33.5 bits (73), Expect = 0.87
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 494 STSYRAEISKEEKPSATDAEGSADSAAIIPNMVKKID--LAPTVESDAAAIPEIKTPEAA 667
STS E +E++ + D+ + SA+ +PN ++ P + S +A+ P P+ A
Sbjct: 374 STSDDEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDMLSSSASSP---APDPA 430
Query: 668 DAPKLADNPVDEDKPADISPDAPK 739
P A P PA + P K
Sbjct: 431 PEPDPASAPAPASAPAPVVPQPSK 454
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 33.5 bits (73), Expect = 0.87
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 518 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 697
+KEE S +A+ A P VK + A + + E K+P A +P+ A +PV
Sbjct: 554 AKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKE-----EAKSPAEAKSPEKAKSPV 608
Query: 698 DEDKPADISPDAP-KAEAKSADDLR 769
E+ + +P K EAKS +++
Sbjct: 609 KEEAKSPAEAKSPVKEEAKSPAEVK 633
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 33.5 bits (73), Expect = 0.87
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 518 SKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNPV 697
+KEE S +A+ A P VK + A + + E K+P A +P+ A +PV
Sbjct: 562 AKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKE-----EAKSPAEAKSPEKAKSPV 616
Query: 698 DEDKPADISPDAP-KAEAKSADDLR 769
E+ + +P K EAKS +++
Sbjct: 617 KEEAKSPAEAKSPVKEEAKSPAEVK 641
>BC039878-1|AAH39878.1| 825|Homo sapiens chromosome 14 open reading
frame 155 protein.
Length = 825
Score = 33.1 bits (72), Expect = 1.2
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 515 ISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIPEIKTPEAADAPKLADNP 694
+S EE P ++ A + ++ LA T S A E++ P A +AP P
Sbjct: 567 VSIEEAPLELQPPSGEETTAEEASAAIQL-LAATEASAEEAPAEVQPPPAEEAPAEVQPP 625
Query: 695 VDEDKPADISPDAPKAEAKSAD 760
E+ PA++ P P AE A+
Sbjct: 626 PAEEAPAEVQP--PPAEETPAE 645
Score = 30.7 bits (66), Expect = 6.1
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 512 EISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAIP-EIKTPEAADAPKLAD 688
E S EE P+ + ++ A + + A A P E++ P A +AP
Sbjct: 600 EASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEETPAEVQPPPAEEAPAEVQ 659
Query: 689 NPVDEDKPADISPDAPKAEAKSAD 760
P E+ PA++ P P AE A+
Sbjct: 660 PPPAEEAPAEVQP--PPAEEAPAE 681
>BC009449-1|AAH09449.1| 569|Homo sapiens MGC2641 protein protein.
Length = 569
Score = 31.9 bits (69), Expect = 2.7
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 521 KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAI-PEIKTPEAADAPKLADNPV 697
K++ PSA+D++ ADS P V A + S +++ ++ + K A+ P+
Sbjct: 123 KKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPL 182
Query: 698 DEDKPADISPDAPKAEAKSADD 763
+ + P+ P + + S D
Sbjct: 183 PKPRGRKPKPERPPSSSSSDSD 204
>BC000755-1|AAH00755.1| 670|Homo sapiens hepatoma-derived growth
factor-related protein 2 protein.
Length = 670
Score = 31.9 bits (69), Expect = 2.7
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 521 KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAI-PEIKTPEAADAPKLADNPV 697
K++ PSA+D++ ADS P V A + S +++ ++ + K A+ P+
Sbjct: 225 KKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPL 284
Query: 698 DEDKPADISPDAPKAEAKSADD 763
+ + P+ P + + S D
Sbjct: 285 PKPRGRKPKPERPPSSSSSDSD 306
>AY358600-1|AAQ88963.1| 671|Homo sapiens HGDF-related pro 2
protein.
Length = 671
Score = 31.9 bits (69), Expect = 2.7
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 521 KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAI-PEIKTPEAADAPKLADNPV 697
K++ PSA+D++ ADS P V A + S +++ ++ + K A+ P+
Sbjct: 225 KKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPL 284
Query: 698 DEDKPADISPDAPKAEAKSADD 763
+ + P+ P + + S D
Sbjct: 285 PKPRGRKPKPERPPSSSSSDSD 306
>AF294267-1|AAP97281.1| 671|Homo sapiens hepatoma-derived growth
factor 2 protein.
Length = 671
Score = 31.9 bits (69), Expect = 2.7
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 521 KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAI-PEIKTPEAADAPKLADNPV 697
K++ PSA+D++ ADS P V A + S +++ ++ + K A+ P+
Sbjct: 225 KKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPL 284
Query: 698 DEDKPADISPDAPKAEAKSADD 763
+ + P+ P + + S D
Sbjct: 285 PKPRGRKPKPERPPSSSSSDSD 306
>AB208892-1|BAD92129.1| 472|Homo sapiens hepatoma-derived growth
factor-related protein 2 isoform 1 variant protein.
Length = 472
Score = 31.9 bits (69), Expect = 2.7
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 521 KEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESDAAAI-PEIKTPEAADAPKLADNPV 697
K++ PSA+D++ ADS P V A + S +++ ++ + K A+ P+
Sbjct: 176 KKKAPSASDSDSKADSDGAKPEPVAMARSASSSSSSSSSSDSDVSVKKPPRGRKPAEKPL 235
Query: 698 DEDKPADISPDAPKAEAKSADD 763
+ + P+ P + + S D
Sbjct: 236 PKPRGRKPKPERPPSSSSSDSD 257
>BC000713-1|AAH00713.1| 646|Homo sapiens A kinase (PRKA) anchor
protein 8-like protein.
Length = 646
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = +2
Query: 494 STSYRAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESD 628
+TS+ E+ + + T A GSA + +++ + +++D+ P +E+D
Sbjct: 64 ATSHSWEMPSSDTNANTSASGSASADSVLSRINQRLDMVPHLETD 108
>AJ243467-1|CAB65092.1| 646|Homo sapiens LA95 protein protein.
Length = 646
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = +2
Query: 494 STSYRAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESD 628
+TS+ E+ + + T A GSA + +++ + +++D+ P +E+D
Sbjct: 64 ATSHSWEMPSSDTNANTSASGSASADSVLSRINQRLDMVPHLETD 108
>AB025905-1|BAA85003.1| 646|Homo sapiens neighbor of A-kinase
anchoring protein 95 protein.
Length = 646
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = +2
Query: 494 STSYRAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESD 628
+TS+ E+ + + T A GSA + +++ + +++D+ P +E+D
Sbjct: 64 ATSHSWEMPSSDTNANTSASGSASADSVLSRINQRLDMVPHLETD 108
>AB015332-1|BAA34791.1| 373|Homo sapiens HRIHFB2018 protein.
Length = 373
Score = 31.1 bits (67), Expect = 4.7
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = +2
Query: 494 STSYRAEISKEEKPSATDAEGSADSAAIIPNMVKKIDLAPTVESD 628
+TS+ E+ + + T A GSA + +++ + +++D+ P +E+D
Sbjct: 79 ATSHSWEMPSSDTNANTSASGSASADSVLSRINQRLDMVPHLETD 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,321,234
Number of Sequences: 237096
Number of extensions: 1646785
Number of successful extensions: 5463
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5456
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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