Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20026
(735 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 204 4e-53
03_01_0547 + 4093196-4093657,4094267-4095148 204 4e-53
03_01_0544 + 4082528-4082989,4083585-4084466 204 4e-53
03_01_0543 + 4076981-4077442,4078145-4079026 204 4e-53
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 113 1e-25
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 113 1e-25
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 95 5e-20
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 76 3e-14
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 73 3e-13
02_04_0462 + 23131433-23132836 69 3e-12
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 67 1e-11
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 44 1e-04
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 42 7e-04
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 41 9e-04
04_01_0103 + 1082077-1082167,1083037-1085477 40 0.002
02_04_0017 + 18937774-18937864,18938505-18940945 40 0.002
02_04_0148 - 20198407-20201424 39 0.005
01_06_0662 + 30987187-30987277,30987825-30990214 38 0.006
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 38 0.011
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 37 0.014
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 37 0.019
03_05_0511 + 25056018-25059107 36 0.025
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 35 0.058
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 33 0.24
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 31 0.95
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 25 1.5
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.7
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 30 2.2
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 2.9
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195... 29 5.1
08_02_0453 - 17331534-17331656,17332288-17332340,17332612-173327... 29 5.1
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 6.7
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 28 6.7
03_04_0206 - 18493178-18495310 28 6.7
09_04_0483 + 17979566-17980019,17980242-17980321,17980431-179808... 28 8.8
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 8.8
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 28 8.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 204 bits (499), Expect = 4e-53
Identities = 100/133 (75%), Positives = 107/133 (80%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYW 291
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 292 TN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 471
+ GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 472 GEFEAGISKNGQT 510
G FEAGISK+GQT
Sbjct: 121 GGFEAGISKDGQT 133
Score = 113 bits (271), Expect = 2e-25
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
REHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPI
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPI 193
Query: 690 SGWHGDNMLEPSTKM 734
SG+ GDNM+E ST +
Sbjct: 194 SGFEGDNMIERSTNL 208
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 204 bits (499), Expect = 4e-53
Identities = 100/133 (75%), Positives = 107/133 (80%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYW 291
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 292 TN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 471
+ GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 472 GEFEAGISKNGQT 510
G FEAGISK+GQT
Sbjct: 121 GGFEAGISKDGQT 133
Score = 113 bits (271), Expect = 2e-25
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
REHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPI
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPI 193
Query: 690 SGWHGDNMLEPSTKM 734
SG+ GDNM+E ST +
Sbjct: 194 SGFEGDNMIERSTNL 208
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 204 bits (499), Expect = 4e-53
Identities = 100/133 (75%), Positives = 107/133 (80%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYW 291
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 292 TN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 471
+ GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 472 GEFEAGISKNGQT 510
G FEAGISK+GQT
Sbjct: 121 GGFEAGISKDGQT 133
Score = 113 bits (271), Expect = 2e-25
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
REHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPI
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPI 193
Query: 690 SGWHGDNMLEPSTKM 734
SG+ GDNM+E ST +
Sbjct: 194 SGFEGDNMIERSTNL 208
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 204 bits (499), Expect = 4e-53
Identities = 100/133 (75%), Positives = 107/133 (80%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYW 291
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA E K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 292 TN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 471
+ GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 472 GEFEAGISKNGQT 510
G FEAGISK+GQT
Sbjct: 121 GGFEAGISKDGQT 133
Score = 113 bits (271), Expect = 2e-25
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
REHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPI
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPI 193
Query: 690 SGWHGDNMLEPSTKM 734
SG+ GDNM+E ST +
Sbjct: 194 SGFEGDNMIERSTNL 208
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 113 bits (273), Expect = 1e-25
Identities = 56/128 (43%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Frame = +1
Query: 127 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN*RL 306
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E K + W
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKE--KGKGSFAYAWAMDES 303
Query: 307 SVSV--GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 480
S G+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG F
Sbjct: 304 SEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSF 363
Query: 481 EAGISKNG 504
EAG+ G
Sbjct: 364 EAGMDGEG 371
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
+EHA L + GV+QLIV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+
Sbjct: 379 KEHAQLIRSFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPL 436
Query: 690 SGWHGDNMLE 719
S N+++
Sbjct: 437 SAVENQNLIK 446
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 113 bits (273), Expect = 1e-25
Identities = 56/128 (43%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Frame = +1
Query: 127 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN*RL 306
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E K + W
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKE--KGKGSFAYAWAMDES 303
Query: 307 SVSV--GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 480
S G+T+ +A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG F
Sbjct: 304 SEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSF 363
Query: 481 EAGISKNG 504
EAG+ G
Sbjct: 364 EAGMDGEG 371
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
+EHA L + GV+QLIV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+
Sbjct: 379 KEHAQLIRSFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPL 436
Query: 690 SGWHGDNMLE 719
S N+++
Sbjct: 437 SAVENQNLIK 446
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Frame = +1
Query: 160 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN*RLSVSVGITIDIA 339
D+GKST G +++ G +D RTI+K+EKEA++ ++ M G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVG 63
Query: 340 LWKFETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 507
FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G K GQ
Sbjct: 64 RAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQ 123
Query: 508 T 510
T
Sbjct: 124 T 124
Score = 64.9 bits (151), Expect = 6e-11
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVP 686
REH LLA TLGV +LIV +NKMD +S+ R++EI+ ++ +++ GYN V F+P
Sbjct: 125 REHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLP 184
Query: 687 ISGWHGDNM 713
ISG G NM
Sbjct: 185 ISGLLGSNM 193
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 75.8 bits (178), Expect = 3e-14
Identities = 29/62 (46%), Positives = 46/62 (74%)
Frame = +1
Query: 319 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 498
GIT+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+
Sbjct: 297 GITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGI 356
Query: 499 NG 504
NG
Sbjct: 357 NG 358
Score = 64.5 bits (150), Expect = 8e-11
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
+EH+ L + GV LIV VNKMDS E YS+ RF IK ++ ++++ GY +AVA+VPI
Sbjct: 363 KEHSQLVRSFGVDNLIVVVNKMDSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPI 420
Query: 690 SGWHGDNML 716
S +N++
Sbjct: 421 SAMENENLM 429
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 255 MGKGSFKYAWVLDKLKAERER 317
+GKGSF YAW +D+ ERER
Sbjct: 276 IGKGSFAYAWAMDESADERER 296
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = +1
Query: 319 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 498
G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G +
Sbjct: 16 GKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 75
Query: 499 NGQT 510
GQT
Sbjct: 76 GGQT 79
Score = 65.3 bits (152), Expect = 5e-11
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN-PAAVAFVP 686
REH LLA TLGV +L+V +NKMD + +S+ R++EI+ ++ ++K GYN V F+P
Sbjct: 80 REHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLP 139
Query: 687 ISGWHGDNM 713
ISG G NM
Sbjct: 140 ISGLLGTNM 148
>02_04_0462 + 23131433-23132836
Length = 467
Score = 69.3 bits (162), Expect = 3e-12
Identities = 42/122 (34%), Positives = 61/122 (50%)
Frame = +1
Query: 109 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGY 288
K + K H+NI IGHVD GK+T T L + +K++ E P
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYD----EIDAAPEER--- 115
Query: 289 WTN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 468
+ GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+
Sbjct: 116 --------ARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 167
Query: 469 TG 474
G
Sbjct: 168 DG 169
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 641
+EH LLA +GV +++V +NK D + E E+++ +SSY
Sbjct: 175 KEHILLAKQVGVPKIVVFLNKKDQVDDEELLQLVELEVRELLSSY 219
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 67.3 bits (157), Expect = 1e-11
Identities = 42/119 (35%), Positives = 60/119 (50%)
Frame = +1
Query: 118 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN 297
+ K H+N+ IGHVD GK+T T + K F+ E K P
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFD----EIDKAPEEK------ 112
Query: 298 *RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
+ GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+A G
Sbjct: 113 -----ARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDG 166
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
+EH LLA +GV L+ +NK+D+ + P E +E+ S+ K G + +
Sbjct: 172 KEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSAL 231
Query: 690 SGWHGDN 710
S G N
Sbjct: 232 SALQGTN 238
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 44.4 bits (100), Expect = 1e-04
Identities = 37/124 (29%), Positives = 54/124 (43%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN*RLSVS 315
NI + H+DSGK+T T ++Y G I E E ++ V + + L
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRIH----EIHEVRGRDGVGAKMDSMD------LERE 119
Query: 316 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 495
GITI A + Y V IID PGH DF + D A+L++ + G I+
Sbjct: 120 KGITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 179
Query: 496 KNGQ 507
+ Q
Sbjct: 180 VDRQ 183
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 41.5 bits (93), Expect = 7e-04
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI------DKRTIEKFEKEAQEWVKDPS 273
M K+ N+ VI HVD GKST T L+ G I D R + EA+ + S
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKS 72
Query: 274 NMLGYWTN*RLSVSVGITIDIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQAD 441
+S+ +T D AL FE + Y + +ID+PGH DF + D
Sbjct: 73 T--------GISLYYEMT-DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITD 123
Query: 442 CAVLIV 459
A+++V
Sbjct: 124 GALVVV 129
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 41.1 bits (92), Expect = 9e-04
Identities = 29/113 (25%), Positives = 49/113 (43%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN*RLSVS 315
N+ ++GH+ GK+ L+ + +D F+ E + V+ + R+S+
Sbjct: 150 NVALVGHLQHGKTVFMDMLVEQTHEVDT-----FDSEGERHVRFTDTRVDEQER-RVSIK 203
Query: 316 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
+ + + L Y I+D PGH +F M AD AVL+V A G
Sbjct: 204 A-VPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 40.3 bits (90), Expect = 0.002
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI------DKRTIEKFEKEAQEWVKDPS 273
M K+ N+ VI HVD GKST T L+ G I D R + EA+ + S
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 274 NMLGYWTN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 453
+ + +S ++ + + + ++Y + +ID+PGH DF + D A++
Sbjct: 73 TGISLFY--EMSDE---SLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALV 127
Query: 454 IV 459
+V
Sbjct: 128 VV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 40.3 bits (90), Expect = 0.002
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI------DKRTIEKFEKEAQEWVKDPS 273
M K+ N+ VI HVD GKST T L+ G I D R + EA+ + S
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 274 NMLGYWTN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 453
+ + +S ++ + + + ++Y + +ID+PGH DF + D A++
Sbjct: 73 TGISLFY--EMSDE---SLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGALV 127
Query: 454 IV 459
+V
Sbjct: 128 VV 129
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 38.7 bits (86), Expect = 0.005
Identities = 31/113 (27%), Positives = 49/113 (43%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN*RLSVS 315
N ++ HVD GK++ HLI G ++R E+ A+ V D R
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSAR--VMDHLEE----EQRRAITM 70
Query: 316 VGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
+I + + + V +ID+PGH DF + AD A+++V A G
Sbjct: 71 KSASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 38.3 bits (85), Expect = 0.006
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI------DKRTIEKFEKEAQEWVKDPS 273
M K+ N+ V+ HVD GKST T L+ G I D R + EA+ + S
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKS 72
Query: 274 NMLGYWTN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 453
+ + +S ++ + ++Y + +ID+PGH DF + D A++
Sbjct: 73 TGISLYY--EMSDE---SLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGALV 127
Query: 454 IV 459
+V
Sbjct: 128 VV 129
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = +1
Query: 130 HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK--EAQEWVKDPSNMLGYWTN*R 303
HI+ V++ H+D+GK+TTT ++Y G K I +F++ +W++
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGRNYK--IGEFQEGTVTMDWMEQEQER-------- 153
Query: 304 LSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 459
+++ A W +K+ + IID PGH DF + D A++ +
Sbjct: 154 -GITITSPPTTAFW----NKHRINIIDTPGHVDFTLEVERALRVLDGAIMSI 200
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 37.1 bits (82), Expect = 0.014
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKFEKEAQEWVKDPSNMLGYWTN*RLS 309
N+ VI HVD GK+T L+ +CG +R ++ E + + S + S
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT--------S 117
Query: 310 VSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
VS WK + + ++D PGH DF + + AVL+V AG G
Sbjct: 118 VS---------WK----ENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 36.7 bits (81), Expect = 0.019
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYWTN*RLSVS 315
N +I H+D GKST L+ G + KR ++ Q+++ NM L
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMK------QQFL---DNM-------DLERE 122
Query: 316 VGITIDIALWKFE----TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
GITI + + Y + +ID PGH DF + + + A+L+V A G
Sbjct: 123 RGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 36.3 bits (80), Expect = 0.025
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEWVKDPSNMLGYWTN*RLS 309
N ++ HVD GK+T HL+ CG + R + +++ +
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCGDGLVHPRLAGRL--RFMDYLDEEQRR---------- 59
Query: 310 VSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
IT+ A + V +ID+PGH DF + + +D A+++V A G
Sbjct: 60 ---AITMKSAAVVLHHGGHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 35.1 bits (77), Expect = 0.058
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 8/121 (6%)
Frame = +1
Query: 136 NIVVIGHVDSGKSTTTGHLIYKCGGIDK-----RTIEKFEKEAQEWVK---DPSNMLGYW 291
N +I HVD GKST L+ G I K + ++K + E + + + M
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYRH 118
Query: 292 TN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 471
N +L S + + Y + +ID PGH DF + + A+L+V A
Sbjct: 119 ANNQLPASD---------QPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQ 169
Query: 472 G 474
G
Sbjct: 170 G 170
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 319 GITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
GIT I + E S +T +D PGH F G + D VL+VAA G
Sbjct: 229 GITQHIGAFVVEMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 31.1 bits (67), Expect = 0.95
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 367 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 465
+V+ +D PGH + M+ G + D A+L++AA
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 25.4 bits (53), Expect(2) = 1.5
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = +1
Query: 310 VSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
++ GI + + + + + +D PGH F G D +++V+A G
Sbjct: 460 ITQGIGAYQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVVSADDG 514
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 139 IVVIGHVDSGKSTTTGHL 192
+ ++GHVD GK+T ++
Sbjct: 430 VTIMGHVDHGKTTLLDYI 447
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 376 IIDAPGHRDFIKNMITGTSQADCAVLIV 459
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +3
Query: 573 MDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPSTK 731
M STEP + + + EV IKK+GYN + A+ G+H N PS++
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 376 IIDAPGHRDFIKNMITGTSQADCAVLIV 459
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>09_01_0129 -
1954470-1955129,1956285-1956371,1956475-1956663,
1956772-1956900,1957386-1957472,1957572-1958036,
1959844-1959923,1961295-1961358,1961444-1961455
Length = 590
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Frame = -2
Query: 689 NGHESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVY 564
NGH +++V++N L Y LL + G ++ SG+ HFVY
Sbjct: 379 NGHYGVTTFVISNTLSSTPYLLLIAIIPGAIAYYLSGLQRQIEHFVY 425
>08_02_0453 -
17331534-17331656,17332288-17332340,17332612-17332704,
17332747-17332903,17333246-17333384,17333467-17333529,
17337990-17338071,17338167-17338245,17338853-17339032,
17340010-17340272,17340486-17340622,17341662-17341729
Length = 478
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 587 FSGIHFVYSYDELFDTEGESEQGMLTV*P 501
++G+H Y+Y ++ D +G E G TV P
Sbjct: 395 YAGLHHKYAYAQVIDVQGSLEGGCGTVRP 423
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 376 IIDAPGHRDFIKNMITGTSQADCAVLIV 459
+ID PGH F G S D AV++V
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 626 LLDFLKSGLTVWWFSGIHFVY 564
+L+ GL VW GIHFVY
Sbjct: 234 ILEIKTGGLVVWTRGGIHFVY 254
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 564 VNKMDSTEPPYSEPRFEEIKKEV 632
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>09_04_0483 +
17979566-17980019,17980242-17980321,17980431-17980895,
17981460-17981597,17982574-17982660,17982781-17982909,
17983034-17983225,17983393-17983479,17983707-17984378
Length = 767
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -2
Query: 689 NGHESDSSWVVANLLDV*GYFLLDFLKSGLTVWWFSGI-----HFVYSYDELFDT 540
NGH S+V+AN L Y L + G ++ +G+ HF Y LF T
Sbjct: 552 NGHYGVGSFVIANTLSATPYLALISVAPGAIGYYLTGLQSSIDHFAYFAVVLFTT 606
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 124 KTHINIVVIGHVDSG 168
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 492 DTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 358
D F+G + + I LRG+ +HVLDE RS++D VL+
Sbjct: 350 DKLIHFSGV-AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,389,926
Number of Sequences: 37544
Number of extensions: 421778
Number of successful extensions: 1308
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -