Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20026
(735 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 228 5e-62
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 224 6e-61
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 153 2e-39
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 153 2e-39
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.3
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 1.7
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 3.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.9
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 9.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 228 bits (557), Expect = 5e-62
Identities = 112/133 (84%), Positives = 113/133 (84%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYW 291
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 292 TN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 471
+ GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 472 GEFEAGISKNGQT 510
GEFEAGISKNGQT
Sbjct: 121 GEFEAGISKNGQT 133
Score = 153 bits (370), Expect = 2e-39
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI
Sbjct: 134 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 193
Query: 690 SGWHGDNMLEPSTKM 734
SGWHGDNMLE S+KM
Sbjct: 194 SGWHGDNMLEVSSKM 208
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 224 bits (548), Expect = 6e-61
Identities = 110/133 (82%), Positives = 112/133 (84%)
Frame = +1
Query: 112 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEWVKDPSNMLGYW 291
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQE K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 292 TN*RLSVSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 471
+ GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 472 GEFEAGISKNGQT 510
GEFEAGISKNGQT
Sbjct: 121 GEFEAGISKNGQT 133
Score = 146 bits (353), Expect = 2e-37
Identities = 68/74 (91%), Positives = 70/74 (94%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
REHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPI
Sbjct: 134 REHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPI 193
Query: 690 SGWHGDNMLEPSTK 731
SGWHGDNMLEPS K
Sbjct: 194 SGWHGDNMLEPSPK 207
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 153 bits (370), Expect = 2e-39
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 690 SGWHGDNMLEPSTKM 734
SGWHGDNMLE S+KM
Sbjct: 121 SGWHGDNMLEVSSKM 135
Score = 129 bits (312), Expect = 2e-32
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +1
Query: 331 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 510
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 153 bits (370), Expect = 2e-39
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = +3
Query: 510 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 689
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI
Sbjct: 77 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 136
Query: 690 SGWHGDNMLEPSTKM 734
SGWHGDNMLE S+KM
Sbjct: 137 SGWHGDNMLEVSSKM 151
Score = 137 bits (331), Expect = 1e-34
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +1
Query: 319 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 498
GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 72
Query: 499 NGQT 510
NGQT
Sbjct: 73 NGQT 76
Score = 29.5 bits (63), Expect = 0.034
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 282 WVLDKLKAERER 317
WVLDKLKAERER
Sbjct: 1 WVLDKLKAERER 12
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +1
Query: 370 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 474
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.56
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 124 KTHINIVVIGHVDSGKST 177
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 133 INIVVIGHVDSGKST 177
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 81 FHFFTSQNNFFDTHHGLQTACNIRL 7
FH T+ N F HH +IRL
Sbjct: 108 FHIATTSNEFIRIHHSGSITRSIRL 132
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 81 FHFFTSQNNFFDTHHGLQTACNIRL 7
FH T+ N F HH +IRL
Sbjct: 108 FHIATTSNEFIRIHHSGSITRSIRL 132
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 81 FHFFTSQNNFFDTHHGLQTACNIRL 7
FH T+ N F HH +IRL
Sbjct: 47 FHIATTSNEFIRIHHSGSITRSIRL 71
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 276 YAWVLDKLKAERERRYHNRYCSLEV 350
Y W+ + + +R R+ + RY +LE+
Sbjct: 261 YPWMRSQFERKRGRQTYTRYQTLEL 285
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 355 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 456
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 355 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 456
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 731 FG*RLQHVVSVPSRNGHESDSSWV 660
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 9.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 574 WIPLNHHTVSPDLRKSRRKY 633
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,300
Number of Sequences: 438
Number of extensions: 4550
Number of successful extensions: 29
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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