Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20024
(560 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7TZA3 Cluster: DNA-directed RNA polymerase II large su... 37 0.37
UniRef50_Q9VVP0 Cluster: CG13699-PA; n=1; Drosophila melanogaste... 35 1.5
UniRef50_Q2JC13 Cluster: Radical SAM; n=2; Frankia|Rep: Radical ... 34 2.0
UniRef50_A2DM84 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_A4HF60 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_UPI0000E822B9 Cluster: PREDICTED: similar to prolin ric... 33 3.4
UniRef50_Q5KFQ2 Cluster: Cytochrome c heme lyase (Cchl), putativ... 33 3.4
UniRef50_Q59T40 Cluster: Questionable orf; n=2; cellular organis... 33 3.4
UniRef50_Q2GMP5 Cluster: Predicted protein; n=1; Chaetomium glob... 33 3.4
UniRef50_P11129 Cluster: Protein P3; n=18; Pseudomonas phage phi... 33 4.6
UniRef50_O64496 Cluster: F20D22.14 protein; n=17; Magnoliophyta|... 32 8.0
UniRef50_A2ZV86 Cluster: Putative uncharacterized protein; n=4; ... 32 8.0
UniRef50_Q54KM1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_Q4UA64 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_P16252 Cluster: Cuticle collagen 2C; n=3; Rhabditida|Re... 32 8.0
>UniRef50_A7TZA3 Cluster: DNA-directed RNA polymerase II large
subunit; n=2; Lepeophtheirus salmonis|Rep: DNA-directed
RNA polymerase II large subunit - Lepeophtheirus
salmonis (salmon louse)
Length = 196
Score = 36.7 bits (81), Expect = 0.37
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 297 SFQPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSY 449
S+ P YS G P+A SY G P + ++GY +YPYV P+ Y
Sbjct: 146 SYTPSYSYGY-PSAHSY-GYAPRVYKREAEASYTTSYGYSAYPYVRPSYGY 194
>UniRef50_Q9VVP0 Cluster: CG13699-PA; n=1; Drosophila
melanogaster|Rep: CG13699-PA - Drosophila melanogaster
(Fruit fly)
Length = 1051
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 303 QPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
+PGY + PA P P+ P T Y S+ Y P+ + + T +VP P
Sbjct: 206 RPGYVFDESPAPSYRRPTRPPPSLPPPPTTAAHKISYDSHDYPPPSYAAEQTSNFVPQQP 265
Query: 483 Q 485
+
Sbjct: 266 K 266
>UniRef50_Q2JC13 Cluster: Radical SAM; n=2; Frankia|Rep: Radical SAM
- Frankia sp. (strain CcI3)
Length = 714
Score = 34.3 bits (75), Expect = 2.0
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 234 SICRIVERWVNWSLGWGIIWVSVWISRHFLFR*IYY*NFKTLEILI*SRPR 82
S+ R+ R+ +W +G W W+ RHF + Y FK+LE ++ PR
Sbjct: 566 SMGRVEARYADWRIGVAASWAQRWVDRHFA---LDY-TFKSLEKVLDGAPR 612
>UniRef50_A2DM84 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 640
Score = 34.3 bits (75), Expect = 2.0
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 291 QHSFQPGYSLGQQPAAMSYPGITPAPT-APRGHVTPHGAFGYQSYPYVTPTQ 443
Q S+ P QQP P P P AP P+GA Q YPY PTQ
Sbjct: 548 QPSYVPPAQQQQQPTPYGAPPEQPYPYGAPTQQPYPYGAPTQQPYPYGAPTQ 599
>UniRef50_A4HF60 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 2320
Score = 33.9 bits (74), Expect = 2.6
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 345 YPGITPAP--TAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTPQNASILSE 506
YP P+P TAP PHGA+ ++PY P+ S + + TP+ ++ +E
Sbjct: 922 YPTYVPSPPRTAPAAPSPPHGAYMPVAHPYFDPSSSMGSYMPDFAPTPRFSAHTTE 977
>UniRef50_UPI0000E822B9 Cluster: PREDICTED: similar to prolin rich
protein; n=1; Gallus gallus|Rep: PREDICTED: similar to
prolin rich protein - Gallus gallus
Length = 195
Score = 33.5 bits (73), Expect = 3.4
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGA-FGYQSYPYVTPTQSYDTTIE----WVPTTPQNAS 494
PA M P P P TP A F +P+V PT + T++ WVP TP +
Sbjct: 118 PAPMGAPNTQQCPQHPWVPPTPINATFMCPQHPWVPPTPNGVTSMRPQHPWVPPTPNGVA 177
Query: 495 ILSEKQWWL 521
+ + W+
Sbjct: 178 FMCPQHPWV 186
>UniRef50_Q5KFQ2 Cluster: Cytochrome c heme lyase (Cchl), putative;
n=1; Filobasidiella neoformans|Rep: Cytochrome c heme
lyase (Cchl), putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 281
Score = 33.5 bits (73), Expect = 3.4
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Frame = +3
Query: 315 SLGQQP-AAMSYPGITPAPTAPRGHVTPHG-AFGY-QSYPYVTPTQSYDTTIEWVPTTPQ 485
SL +QP + P A T PR P G A+G ++ Y +P Q Y+ + TP+
Sbjct: 81 SLSRQPDQKLDLPTERTASTIPRPSSAPGGEAYGTGNTWDYPSPQQFYNALVRKGWETPE 140
Query: 486 NA--------SILSEKQWWLVMKVTMVVPLGDQ 560
++ + L+E+ W VMK +P GDQ
Sbjct: 141 DSVEVMVAIHNFLNERAWDEVMKWEKRLPGGDQ 173
>UniRef50_Q59T40 Cluster: Questionable orf; n=2; cellular
organisms|Rep: Questionable orf - Candida albicans
(Yeast)
Length = 190
Score = 33.5 bits (73), Expect = 3.4
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -3
Query: 240 RWSICRIVERWVNWSLGWGIIWVSVWISRHFLFR*IYY*NFKTLEILI 97
RW + + R + W +GW + W W R F++R ++ F L +++
Sbjct: 59 RWFMRWFMWRMMRWFVGWFMRWFMRWFVRWFMWRMFWFFGFSILILVM 106
>UniRef50_Q2GMP5 Cluster: Predicted protein; n=1; Chaetomium
globosum|Rep: Predicted protein - Chaetomium globosum
(Soil fungus)
Length = 1096
Score = 33.5 bits (73), Expect = 3.4
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +3
Query: 312 YSLGQ--QPAAMSY---PGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPT 476
Y+ GQ QP Y PG +PA AP G + P G Q YPY T W P
Sbjct: 851 YTYGQHSQPQPSGYANPPGPSPATPAPGGMIQPVGGQPPQQYPYPANVPQQHT---WNPG 907
Query: 477 TP 482
+P
Sbjct: 908 SP 909
>UniRef50_P11129 Cluster: Protein P3; n=18; Pseudomonas phage
phi6|Rep: Protein P3 - Bacteriophage phi-6
Length = 648
Score = 33.1 bits (72), Expect = 4.6
Identities = 20/50 (40%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +3
Query: 348 PGITPAPTAPRGHVTPHGAFGYQSYPYVT---PTQSYDTTIEWVPTTPQN 488
P P P AP G GA G+Q YP T P D TIE T N
Sbjct: 333 PATIPVPLAPLGGAGGPGAQGFQVYPVFTWGLPEFMTDVTIEGTVTADSN 382
>UniRef50_O64496 Cluster: F20D22.14 protein; n=17;
Magnoliophyta|Rep: F20D22.14 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1345
Score = 32.3 bits (70), Expect = 8.0
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 300 FQPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVT-PTQSY 449
+ P Y GQQ A +Y G TAP+ A Y +YP T PTQSY
Sbjct: 689 WNPAY--GQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGAYPAQTYPTQSY 737
>UniRef50_A2ZV86 Cluster: Putative uncharacterized protein; n=4;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 471
Score = 32.3 bits (70), Expect = 8.0
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 360 PAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
P PT P + P A Y YPY P+Q W P+TP
Sbjct: 75 PPPTTP-AYSFPPPAQPYGQYPYPYPSQGQAGAAYWPPSTP 114
>UniRef50_Q54KM1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 358
Score = 32.3 bits (70), Expect = 8.0
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +3
Query: 303 QPGYSLGQQP-AAMSYPGITPAP--TAPRGHVTPHGAFGYQS--YPYVTPTQ 443
QP + QQP MS G+ P P P+G + PH F QS YPY+ Q
Sbjct: 160 QPPQQMQQQPPGTMSPQGMIPPPGFIIPQGGIPPHPQFMPQSHVYPYMMQPQ 211
>UniRef50_Q4UA64 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 1165
Score = 32.3 bits (70), Expect = 8.0
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 306 PGYSLGQQ-PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSY 449
PGY + Q P + T T P G V P+ + Y Y Y TQ+Y
Sbjct: 73 PGYRISHQDPYVPMWISQTYPMTVPYGQVYPNSPYEYIPYDYTRQTQNY 121
>UniRef50_P16252 Cluster: Cuticle collagen 2C; n=3; Rhabditida|Rep:
Cuticle collagen 2C - Haemonchus contortus (Barber pole
worm)
Length = 210
Score = 32.3 bits (70), Expect = 8.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 303 QPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYP 425
QPG + +P PG P PT P G P+GA G+ P
Sbjct: 114 QPGANAPSEPLVPGPPG-PPGPTGPEGPPGPNGAPGHPGAP 153
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,523,315
Number of Sequences: 1657284
Number of extensions: 12305943
Number of successful extensions: 39551
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 37164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39437
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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