Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20024
(560 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 26 0.25
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 24 0.78
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.4
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 3.1
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 22 4.1
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.1
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 4.1
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 4.1
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 5.5
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 21 5.5
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.2
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 25.8 bits (54), Expect = 0.25
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 350 WVRHCCRLLSETIPG 306
WV H C+L S+ +PG
Sbjct: 493 WVPHSCKLTSKEVPG 507
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -3
Query: 492 KHFEEL*EPIQLLYHSSGLVSHKDSFDNQMHHV 394
+H+EE P+ L +H++ L ++ + D ++ V
Sbjct: 411 RHYEENRAPLGLYFHAAWLKNNPEFLDAFLYWV 443
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 24.2 bits (50), Expect = 0.78
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 324 QQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYP--YVTPTQSYDTTIEWVPTTPQNASI 497
++ AA PG P P++PR + P +S D+ ++ P P S+
Sbjct: 49 EEEAASPTPGDVPTPSSPRS--ISEDPLNCRDLPNSRCNSRESSDSLVQ--PRCPSGESM 104
Query: 498 LSEKQWWLVMKVTMVVPLG 554
LSE+ L+ V + P+G
Sbjct: 105 LSERA-ALLRGVPTLSPVG 122
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +2
Query: 323 TTTCSNVLPRNHASTNCTSRPCDTTW 400
TTT +T+ T+RP T W
Sbjct: 1054 TTTTRRTTTTRPTTTSTTTRPTTTNW 1079
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.2 bits (45), Expect = 3.1
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Frame = +3
Query: 306 PGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPY----VTPTQSY 449
PGY G A + P + P H +PH + +PY V PT ++
Sbjct: 14 PGYMDGGAGAGLYEPHVAHRPGLQGLHHSPH--LNHAMHPYHANHVNPTANH 63
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 138 TEIENV*ISIRKPKLSPTP 194
T++ + +R PK+ PTP
Sbjct: 74 TKVHGTTVRVRPPKVYPTP 92
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 138 TEIENV*ISIRKPKLSPTP 194
T++ + +R PK+ PTP
Sbjct: 388 TKVHGTTVRVRPPKVYPTP 406
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 138 TEIENV*ISIRKPKLSPTP 194
T++ + +R PK+ PTP
Sbjct: 621 TKVHGTTVRVRPPKVYPTP 639
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 138 TEIENV*ISIRKPKLSPTP 194
T++ + +R PK+ PTP
Sbjct: 621 TKVHGTTVRVRPPKVYPTP 639
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 5.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 171 KPKLSPTPRTNLPIAL 218
KPK+ P+T LP+ L
Sbjct: 42 KPKMPLLPKTPLPLTL 57
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.4 bits (43), Expect = 5.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 375 PRGHVTPHGA 404
P G++TPHG+
Sbjct: 250 PTGNITPHGS 259
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 7.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 538 IVTFITSHHCFSL 500
++TF+ S HC L
Sbjct: 1249 LITFVMSQHCVEL 1261
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,030
Number of Sequences: 336
Number of extensions: 3367
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -