Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20024
(560 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein. 32 1.6
BC030560-1|AAH30560.1| 551|Homo sapiens HCFC1 protein protein. 32 1.6
BC019887-1|AAH19887.1| 551|Homo sapiens Unknown (protein for IM... 32 1.6
AL353708-3|CAI41052.1| 295|Homo sapiens torsin A interacting pr... 32 1.6
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 31 2.1
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 31 2.1
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 31 2.1
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 31 2.1
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 31 2.1
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 31 2.1
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 31 2.1
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 31 2.1
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 31 2.8
BC010738-1|AAH10738.2| 490|Homo sapiens TMEM112 protein protein. 30 4.8
AK025955-1|BAB15295.1| 458|Homo sapiens protein ( Homo sapiens ... 30 4.8
AK022743-1|BAB14218.1| 567|Homo sapiens protein ( Homo sapiens ... 30 4.8
AE006465-5|AAK61259.1| 567|Homo sapiens possible integral membr... 30 4.8
AB075873-1|BAD38655.1| 563|Homo sapiens putative protein produc... 30 4.8
U03495-1|AAA21325.1| 450|Homo sapiens transcription factor LSF-... 30 6.4
U03494-1|AAA21324.1| 502|Homo sapiens transcription factor LSF ... 30 6.4
BC021925-1|AAH21925.1| 551|Homo sapiens tripartite motif-contai... 30 6.4
BC003634-1|AAH03634.1| 502|Homo sapiens transcription factor CP... 30 6.4
AL391121-3|CAI40861.1| 550|Homo sapiens tripartite motif-contai... 30 6.4
AF281046-1|AAG53087.1| 551|Homo sapiens glioblastoma-expressed ... 30 6.4
AF220034-1|AAG53488.1| 551|Homo sapiens tripartite motif protei... 30 6.4
BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protei... 29 8.5
BC023247-1|AAH23247.1| 462|Homo sapiens TOR1AIP1 protein protein. 29 8.5
BC017453-1|AAH17453.2| 693|Homo sapiens SAP130 protein protein. 29 8.5
AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protei... 29 8.5
AL353708-2|CAI41051.1| 497|Homo sapiens torsin A interacting pr... 29 8.5
AL353708-1|CAI41049.1| 671|Homo sapiens torsin A interacting pr... 29 8.5
AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK023204-1|BAB14461.1| 462|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK022823-1|BAB14261.1| 613|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK021613-1|BAB13855.1| 462|Homo sapiens protein ( Homo sapiens ... 29 8.5
AC012306-2|AAY14878.1| 732|Homo sapiens unknown protein. 29 8.5
>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
Length = 1938
Score = 31.9 bits (69), Expect = 1.6
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 319 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 369
>BC030560-1|AAH30560.1| 551|Homo sapiens HCFC1 protein protein.
Length = 551
Score = 31.9 bits (69), Expect = 1.6
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 418 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 468
>BC019887-1|AAH19887.1| 551|Homo sapiens Unknown (protein for
IMAGE:5142023) protein.
Length = 551
Score = 31.9 bits (69), Expect = 1.6
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
P+ + P +PAP A V P G P P TTI+ +PT P
Sbjct: 418 PSVPANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVP 468
>AL353708-3|CAI41052.1| 295|Homo sapiens torsin A interacting
protein 1 protein.
Length = 295
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 408 GYQSYP--YVTPTQSYDTTIEWVPTTPQNASILSEKQWWLV 524
GYQ P + T T ++ V PQNAS + +WWL+
Sbjct: 35 GYQKTPQEWAPQTARIRTRMQKVTGQPQNASFVKRNRWWLL 75
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 452
PAA+ G +P PT P G P + G YP +P D
Sbjct: 167 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 209
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 452
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 452
PAA+ G +P PT P G P + G YP +P D
Sbjct: 216 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 258
>AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 465
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 452
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVD 316
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 452
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 452
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 316
>AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like
factor 3 protein.
Length = 462
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 452
PAA+ G +P PT P G P + G YP +P D
Sbjct: 274 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPVAPVD 316
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 31.5 bits (68), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 330 PAAMSYPGITPAPTAPRGHVTPHGAF--GYQSYPYVTPTQSYD 452
PAA+ G +P PT P G P + G YP +P D
Sbjct: 250 PAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVD 292
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 31.1 bits (67), Expect = 2.8
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 342 SYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTPQNASILS 503
S PG TP+P P T S P TP+ T+I VPTT N++ +S
Sbjct: 130 SGPGTTPSPV-PTTSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPIS 182
>BC010738-1|AAH10738.2| 490|Homo sapiens TMEM112 protein protein.
Length = 490
Score = 30.3 bits (65), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 137 YRNRKCLDIHTETQIIPHPKDQFTHRS 217
+R+ C+D H ETQ +P+P + H S
Sbjct: 155 WRDLTCMDFHYETQPMPNPVAYYLHHS 181
>AK025955-1|BAB15295.1| 458|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22302 fis, clone HRC04795. ).
Length = 458
Score = 30.3 bits (65), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 137 YRNRKCLDIHTETQIIPHPKDQFTHRS 217
+R+ C+D H ETQ +P+P + H S
Sbjct: 123 WRDLTCMDFHYETQPMPNPVAYYLHHS 149
>AK022743-1|BAB14218.1| 567|Homo sapiens protein ( Homo sapiens
cDNA FLJ12681 fis, clone NT2RM4002446. ).
Length = 567
Score = 30.3 bits (65), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 137 YRNRKCLDIHTETQIIPHPKDQFTHRS 217
+R+ C+D H ETQ +P+P + H S
Sbjct: 232 WRDLTCMDFHYETQPMPNPVAYYLHHS 258
>AE006465-5|AAK61259.1| 567|Homo sapiens possible integral membrane
protein.
Length = 567
Score = 30.3 bits (65), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 137 YRNRKCLDIHTETQIIPHPKDQFTHRS 217
+R+ C+D H ETQ +P+P + H S
Sbjct: 232 WRDLTCMDFHYETQPMPNPVAYYLHHS 258
>AB075873-1|BAD38655.1| 563|Homo sapiens putative protein product
of HMFN1876 protein.
Length = 563
Score = 30.3 bits (65), Expect = 4.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 137 YRNRKCLDIHTETQIIPHPKDQFTHRS 217
+R+ C+D H ETQ +P+P + H S
Sbjct: 228 WRDLTCMDFHYETQPMPNPVAYYLHHS 254
>U03495-1|AAA21325.1| 450|Homo sapiens transcription factor LSF-ID
protein.
Length = 450
Score = 29.9 bits (64), Expect = 6.4
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 12 LNK*RSISLRYLPNRKVGSLNSLFWAVIK*VFRV 113
LN+ +S +R L NRK+G L + ++K +FRV
Sbjct: 89 LNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRV 122
>U03494-1|AAA21324.1| 502|Homo sapiens transcription factor LSF
protein.
Length = 502
Score = 29.9 bits (64), Expect = 6.4
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 12 LNK*RSISLRYLPNRKVGSLNSLFWAVIK*VFRV 113
LN+ +S +R L NRK+G L + ++K +FRV
Sbjct: 89 LNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRV 122
>BC021925-1|AAH21925.1| 551|Homo sapiens tripartite
motif-containing 8 protein.
Length = 551
Score = 29.9 bits (64), Expect = 6.4
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Frame = +3
Query: 306 PGYSLGQQPAAMSYPG----ITPAPTAPRGHVTPHGAFGYQSYP------YVTPTQSYDT 455
P S QQP Y G + V HG G+Q YP + P+Q Y
Sbjct: 447 PNGSAAQQPMLPQYGGRKILVCSVDNCYCSSVANHG--GHQPYPRSGHFPWTVPSQEYSH 504
Query: 456 TIEWVPTTPQNASILSEKQW 515
+ P+ PQ+ L+ + W
Sbjct: 505 PLPPTPSVPQSLPSLAVRDW 524
>BC003634-1|AAH03634.1| 502|Homo sapiens transcription factor CP2
protein.
Length = 502
Score = 29.9 bits (64), Expect = 6.4
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 12 LNK*RSISLRYLPNRKVGSLNSLFWAVIK*VFRV 113
LN+ +S +R L NRK+G L + ++K +FRV
Sbjct: 89 LNQGQSYEIRMLDNRKLGELPEINGKLVKSIFRV 122
>AL391121-3|CAI40861.1| 550|Homo sapiens tripartite
motif-containing 8 protein.
Length = 550
Score = 29.9 bits (64), Expect = 6.4
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Frame = +3
Query: 306 PGYSLGQQPAAMSYPG----ITPAPTAPRGHVTPHGAFGYQSYP------YVTPTQSYDT 455
P S QQP Y G + V HG G+Q YP + P+Q Y
Sbjct: 446 PNGSAAQQPMLPQYGGRKILVCSVDNCYCSSVANHG--GHQPYPRSGHFPWTVPSQEYSH 503
Query: 456 TIEWVPTTPQNASILSEKQW 515
+ P+ PQ+ L+ + W
Sbjct: 504 PLPPTPSVPQSLPSLAVRDW 523
>AF281046-1|AAG53087.1| 551|Homo sapiens glioblastoma-expressed
RING finger protein GERP protein.
Length = 551
Score = 29.9 bits (64), Expect = 6.4
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Frame = +3
Query: 306 PGYSLGQQPAAMSYPG----ITPAPTAPRGHVTPHGAFGYQSYP------YVTPTQSYDT 455
P S QQP Y G + V HG G+Q YP + P+Q Y
Sbjct: 447 PNGSAAQQPMLPQYGGRKILVCSVDNCYCSSVANHG--GHQPYPRSGHFPWTVPSQEYSH 504
Query: 456 TIEWVPTTPQNASILSEKQW 515
+ P+ PQ+ L+ + W
Sbjct: 505 PLPPTPSVPQSLPSLAVRDW 524
>AF220034-1|AAG53488.1| 551|Homo sapiens tripartite motif protein
TRIM8 protein.
Length = 551
Score = 29.9 bits (64), Expect = 6.4
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
Frame = +3
Query: 306 PGYSLGQQPAAMSYPG----ITPAPTAPRGHVTPHGAFGYQSYP------YVTPTQSYDT 455
P S QQP Y G + V HG G+Q YP + P+Q Y
Sbjct: 447 PNGSAAQQPMLPQYGGRKILVCSVDNCYCSSVANHG--GHQPYPRSGHFPWTVPSQEYSH 504
Query: 456 TIEWVPTTPQNASILSEKQW 515
+ P+ PQ+ L+ + W
Sbjct: 505 PLPPTPSVPQSLPSLAVRDW 524
>BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protein,
130kDa protein.
Length = 1048
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 321 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 434
G QPA + PGI PAP +G TP G Q P T
Sbjct: 570 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 609
>BC023247-1|AAH23247.1| 462|Homo sapiens TOR1AIP1 protein protein.
Length = 462
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 441 QSYDTTIEWVPTTPQNASILSEKQWWLV 524
QS T+ V PQNAS + +WWL+
Sbjct: 193 QSPSTSSRQVTGQPQNASFVKRNRWWLL 220
>BC017453-1|AAH17453.2| 693|Homo sapiens SAP130 protein protein.
Length = 693
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 321 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 434
G QPA + PGI PAP +G TP G Q P T
Sbjct: 215 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 254
>AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protein
130 protein.
Length = 1048
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 321 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 434
G QPA + PGI PAP +G TP G Q P T
Sbjct: 570 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 609
>AL353708-2|CAI41051.1| 497|Homo sapiens torsin A interacting
protein 1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 441 QSYDTTIEWVPTTPQNASILSEKQWWLV 524
QS T+ V PQNAS + +WWL+
Sbjct: 228 QSPSTSSRQVTGQPQNASFVKRNRWWLL 255
>AL353708-1|CAI41049.1| 671|Homo sapiens torsin A interacting
protein 1 protein.
Length = 671
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 441 QSYDTTIEWVPTTPQNASILSEKQWWLV 524
QS T+ V PQNAS + +WWL+
Sbjct: 402 QSPSTSSRQVTGQPQNASFVKRNRWWLL 429
>AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 710
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 321 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 434
G QPA + PGI PAP +G TP G Q P T
Sbjct: 543 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 582
>AK023204-1|BAB14461.1| 462|Homo sapiens protein ( Homo sapiens
cDNA FLJ13142 fis, clone NT2RP3003212, moderately
similar to Rattus norvegicus lamina associated
polypeptide 1C (LAP1C) mRNA. ).
Length = 462
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 441 QSYDTTIEWVPTTPQNASILSEKQWWLV 524
QS T+ V PQNAS + +WWL+
Sbjct: 193 QSPSTSSRQVTGQPQNASFVKRNRWWLL 220
>AK022823-1|BAB14261.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ12761 fis, clone NT2RP2001378, weakly similar to
MUCIN 2 PRECURSOR. ).
Length = 613
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 321 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 434
G QPA + PGI PAP +G TP G Q P T
Sbjct: 100 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 139
>AK021613-1|BAB13855.1| 462|Homo sapiens protein ( Homo sapiens
cDNA FLJ11551 fis, clone HEMBA1002999, moderately
similar to Rattus norvegicus lamina associated
polypeptide 1C (LAP1C) mRNA. ).
Length = 462
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 441 QSYDTTIEWVPTTPQNASILSEKQWWLV 524
QS T+ V PQNAS + +WWL+
Sbjct: 193 QSPSTSSRQVTGQPQNASFVKRNRWWLL 220
>AC012306-2|AAY14878.1| 732|Homo sapiens unknown protein.
Length = 732
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 321 GQQPAAMSYPGITPAPTAPRG--HVTPHGAFGYQSYPYVT 434
G QPA + PGI PAP +G TP G Q P T
Sbjct: 254 GIQPAPIGTPGIQPAPLGTQGIHSATPINTQGLQPAPMGT 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,386,654
Number of Sequences: 237096
Number of extensions: 2027134
Number of successful extensions: 11279
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 10721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11273
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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