Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20024
(560 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p pro... 35 0.087
AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-P... 35 0.087
AY167906-1|AAO32794.1| 1200|Drosophila melanogaster scribbled pr... 33 0.35
AY167905-1|AAO32793.1| 1069|Drosophila melanogaster scribbled pr... 33 0.35
AY167904-1|AAO32792.1| 1850|Drosophila melanogaster scribbled pr... 33 0.35
AY167903-1|AAO32791.1| 1205|Drosophila melanogaster scribbled pr... 33 0.35
AJ252084-1|CAB70601.1| 1756|Drosophila melanogaster Vartul-1 pro... 33 0.35
AE014297-1933|AAF55130.1| 537|Drosophila melanogaster CG3984-PA... 30 2.5
BT015240-1|AAT94469.1| 1756|Drosophila melanogaster RE02389p pro... 29 3.3
AY069661-1|AAL39806.2| 1581|Drosophila melanogaster LD43989p pro... 29 3.3
AF190774-1|AAF26357.2| 1756|Drosophila melanogaster Scribble pro... 29 3.3
AE014297-3963|AAX52996.1| 1711|Drosophila melanogaster CG5462-PI... 29 3.3
AE014297-3962|ABI31210.1| 1756|Drosophila melanogaster CG5462-PG... 29 3.3
AE014297-3961|AAN14077.1| 1756|Drosophila melanogaster CG5462-PB... 29 3.3
AE014297-3960|AAN14076.1| 1756|Drosophila melanogaster CG5462-PA... 29 3.3
AE014297-3959|AAF56598.2| 1851|Drosophila melanogaster CG5462-PD... 29 3.3
AE014297-3958|AAX52995.2| 1939|Drosophila melanogaster CG5462-PH... 29 3.3
BT024283-1|ABC86345.1| 818|Drosophila melanogaster IP13967p pro... 29 4.3
AE014298-2221|AAF48513.2| 793|Drosophila melanogaster CG8959-PA... 29 4.3
AE014296-3596|AAN12186.2| 1326|Drosophila melanogaster CG33291-P... 29 4.3
BT023408-1|AAY55824.1| 1585|Drosophila melanogaster AT18603p pro... 29 5.7
AY071278-1|AAL48900.1| 347|Drosophila melanogaster RE30702p pro... 29 5.7
AE014134-1126|AAF52412.2| 1585|Drosophila melanogaster CG31635-P... 29 5.7
AY052042-1|AAK93466.1| 1193|Drosophila melanogaster LP05220p pro... 28 7.5
AE014298-2404|AAF48609.1| 511|Drosophila melanogaster CG9968-PB... 28 7.5
AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-P... 28 7.5
AE014134-368|AAF51283.2| 1193|Drosophila melanogaster CG10882-PA... 28 7.5
AE014296-1943|AAF50070.1| 428|Drosophila melanogaster CG6163-PA... 28 9.9
>AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p
protein.
Length = 1051
Score = 34.7 bits (76), Expect = 0.087
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 303 QPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
+PGY + PA P P+ P T Y S+ Y P+ + + T +VP P
Sbjct: 206 RPGYVFDESPAPSYRRPTRPPPSLPPPPTTAAHKISYDSHDYPPPSYAAEQTSNFVPQQP 265
Query: 483 Q 485
+
Sbjct: 266 K 266
>AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-PA
protein.
Length = 1051
Score = 34.7 bits (76), Expect = 0.087
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 303 QPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
+PGY + PA P P+ P T Y S+ Y P+ + + T +VP P
Sbjct: 206 RPGYVFDESPAPSYRRPTRPPPSLPPPPTTAAHKISYDSHDYPPPSYAAEQTSNFVPQQP 265
Query: 483 Q 485
+
Sbjct: 266 K 266
>AY167906-1|AAO32794.1| 1200|Drosophila melanogaster scribbled
protein.
Length = 1200
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P P S D T P T
Sbjct: 852 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAPVASADLTAPDTPAT 903
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 904 QTVALIHAEQQAHQQQQQTQLAPLGQE 930
>AY167905-1|AAO32793.1| 1069|Drosophila melanogaster scribbled
protein.
Length = 1069
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P P S D T P T
Sbjct: 861 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAPVASADLTAPDTPAT 912
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 913 QTVALIHAEQQAHQQQQQTQLAPLGQE 939
>AY167904-1|AAO32792.1| 1850|Drosophila melanogaster scribbled
protein.
Length = 1850
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P P S D T P T
Sbjct: 1502 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAPVASADLTAPDTPAT 1553
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1554 QTVALIHAEQQAHQQQQQTQLAPLGQE 1580
>AY167903-1|AAO32791.1| 1205|Drosophila melanogaster scribbled
protein.
Length = 1205
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P P S D T P T
Sbjct: 857 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAPVASADLTAPDTPAT 908
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 909 QTVALIHAEQQAHQQQQQTQLAPLGQE 935
>AJ252084-1|CAB70601.1| 1756|Drosophila melanogaster Vartul-1 protein
protein.
Length = 1756
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P P S D T P T
Sbjct: 1408 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAPVASADLTAPDTPAT 1459
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1460 QTVALIHAEQQAHQQQQQTQLAPLGQE 1486
>AE014297-1933|AAF55130.1| 537|Drosophila melanogaster CG3984-PA
protein.
Length = 537
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +3
Query: 330 PAAMSYPGITPAPTA-PRGHVTPH--GAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
P YP + P T P +V P G YP V P +++ + VP+TP
Sbjct: 111 PNTPQYPTVVPNNTFNPNVNVVPATPGCPNTPQYPTVVPNNTFNPNVNVVPSTP 164
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +3
Query: 330 PAAMSYPGITPAPTA-PRGHVTPH--GAFGYQSYPYVTPTQSYDTTIEWVPTTP 482
P YP + P T P +V P G YP V P +++ + VP TP
Sbjct: 139 PNTPQYPTVVPNNTFNPNVNVVPSTPGCPNTPQYPTVVPNNTFNPNVNVVPATP 192
>BT015240-1|AAT94469.1| 1756|Drosophila melanogaster RE02389p protein.
Length = 1756
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1408 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1459
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1460 QTVALIHAEQQAHQQQQQTQLAPLGQE 1486
>AY069661-1|AAL39806.2| 1581|Drosophila melanogaster LD43989p protein.
Length = 1581
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1233 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1284
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1285 QTVALIHAEQQAHQQQQQTQLAPLGQE 1311
>AF190774-1|AAF26357.2| 1756|Drosophila melanogaster Scribble protein.
Length = 1756
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1408 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1459
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1460 QTVALIHAEQQAHQQQQQTQLAPLGQE 1486
>AE014297-3963|AAX52996.1| 1711|Drosophila melanogaster CG5462-PI,
isoform I protein.
Length = 1711
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1503 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1554
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1555 QTVALIHAEQQAHQQQQQTQLAPLGQE 1581
>AE014297-3962|ABI31210.1| 1756|Drosophila melanogaster CG5462-PG,
isoform G protein.
Length = 1756
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1408 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1459
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1460 QTVALIHAEQQAHQQQQQTQLAPLGQE 1486
>AE014297-3961|AAN14077.1| 1756|Drosophila melanogaster CG5462-PB,
isoform B protein.
Length = 1756
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1408 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1459
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1460 QTVALIHAEQQAHQQQQQTQLAPLGQE 1486
>AE014297-3960|AAN14076.1| 1756|Drosophila melanogaster CG5462-PA,
isoform A protein.
Length = 1756
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1408 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1459
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1460 QTVALIHAEQQAHQQQQQTQLAPLGQE 1486
>AE014297-3959|AAF56598.2| 1851|Drosophila melanogaster CG5462-PD,
isoform D protein.
Length = 1851
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1503 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1554
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1555 QTVALIHAEQQAHQQQQQTQLAPLGQE 1581
>AE014297-3958|AAX52995.2| 1939|Drosophila melanogaster CG5462-PH,
isoform H protein.
Length = 1939
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +3
Query: 303 QP-GYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPTQSYDTTIEWVPTT 479
QP G S+ AAM + +P P A ++TP P S D T P T
Sbjct: 1591 QPTGPSVLAAAAAMVHGASSPTPPAATSNITP--------LPTAAAVASADLTAPDTPAT 1642
Query: 480 PQNASILSEKQWWLVMKVTMVVPLGDQ 560
A I +E+Q + T + PLG +
Sbjct: 1643 QTVALIHAEQQAHQQQQQTQLAPLGQE 1669
>BT024283-1|ABC86345.1| 818|Drosophila melanogaster IP13967p
protein.
Length = 818
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 542 YHRDLHNQPPLLLAKYRSILRSCRNPFNCCII 447
+H + NQP L K RS LR CR PF+ +I
Sbjct: 676 HHINPTNQPFLPEVKVRSALRGCRLPFSLELI 707
>AE014298-2221|AAF48513.2| 793|Drosophila melanogaster CG8959-PA
protein.
Length = 793
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 542 YHRDLHNQPPLLLAKYRSILRSCRNPFNCCII 447
+H + NQP L K RS LR CR PF+ +I
Sbjct: 651 HHINPTNQPFLPEVKVRSALRGCRLPFSLELI 682
>AE014296-3596|AAN12186.2| 1326|Drosophila melanogaster CG33291-PA
protein.
Length = 1326
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 133 LLLKFQNTRNTYLITAQNSEFRDPTFRLGRYRS 35
L L+ Q + +TY + SE +P RLGRY S
Sbjct: 295 LTLRSQTSSSTYSSLSAGSESSEPARRLGRYSS 327
>BT023408-1|AAY55824.1| 1585|Drosophila melanogaster AT18603p
protein.
Length = 1585
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 342 SYPGITPAPTAPRGHVTPHGA 404
SYP ++PAPT P +P GA
Sbjct: 895 SYPSLSPAPTPPPPSTSPGGA 915
>AY071278-1|AAL48900.1| 347|Drosophila melanogaster RE30702p
protein.
Length = 347
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 TTKLSCAWL*CSTFIPTRV*SRTTTCSNVLPRNHASTNCTS-RPCDTTWCIWLSKLSLCD 433
TT +CA +T PT TTTC+ A T T+ P TT C + +LC
Sbjct: 152 TTTTTCAPTTTTTCAPTT----TTTCAPTTTTTCAPTTTTTCAPTTTTTCTPTTTTTLCT 207
Query: 434 TN 439
N
Sbjct: 208 NN 209
>AE014134-1126|AAF52412.2| 1585|Drosophila melanogaster CG31635-PA
protein.
Length = 1585
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 342 SYPGITPAPTAPRGHVTPHGA 404
SYP ++PAPT P +P GA
Sbjct: 895 SYPSLSPAPTPPPPSTSPGGA 915
>AY052042-1|AAK93466.1| 1193|Drosophila melanogaster LP05220p
protein.
Length = 1193
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 303 QPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYP 425
QPGY GQQP PG P P P G GY P
Sbjct: 349 QPGYP-GQQPGYPPQPGQQPMPGYPPQPGQQLGGPGYPPQP 388
>AE014298-2404|AAF48609.1| 511|Drosophila melanogaster CG9968-PB,
isoform B protein.
Length = 511
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +3
Query: 294 HSFQPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTP 437
HS QP + Q YPG PAP P P A Y YP P
Sbjct: 49 HS-QPSSQMHPQQH-QQYPGGAPAPYPPMSAPYPSAAPSYPPYPTSNP 94
>AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-PA
protein.
Length = 881
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 254 STTKLSCAWL*CSTFIPTRV*SRTTTCS---NVLPRNHASTNCTSRPCDTTWC 403
+TT +CA +T PT + TTTC+ + +T CTS+ TT C
Sbjct: 711 TTTTTTCAPTTTTTCTPTT--TTTTTCAPTTSSTTTTSTTTTCTSKTISTTTC 761
>AE014134-368|AAF51283.2| 1193|Drosophila melanogaster CG10882-PA
protein.
Length = 1193
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 303 QPGYSLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYP 425
QPGY GQQP PG P P P G GY P
Sbjct: 349 QPGYP-GQQPGYPPQPGQQPMPGYPPQPGQQLGGPGYPPQP 388
>AE014296-1943|AAF50070.1| 428|Drosophila melanogaster CG6163-PA
protein.
Length = 428
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 315 SLGQQPAAMSYPGITPAPTAPRGHVTPHGAFGYQSYPYVTPT 440
++G++PAA P P PTA G P G+F + TPT
Sbjct: 129 TVGEEPAAPVAP--PPLPTATHGRGRPSGSFSWLQ-TATTPT 167
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,726,779
Number of Sequences: 53049
Number of extensions: 581906
Number of successful extensions: 2084
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2066
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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