Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20022
(392 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 129 2e-29
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 127 7e-29
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 124 6e-28
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 109 2e-23
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 106 2e-22
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 101 5e-21
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 93 2e-18
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 91 5e-18
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 81 1e-14
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 79 2e-14
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 74 9e-13
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 73 3e-12
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 72 5e-12
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 71 1e-11
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 67 1e-10
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 62 5e-09
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 60 1e-08
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 56 2e-07
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 56 3e-07
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 54 1e-06
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 48 5e-05
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 34 1.1
UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15... 33 1.5
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 33 2.0
UniRef50_UPI0000D57120 Cluster: PREDICTED: similar to CG13648-PA... 33 2.6
UniRef50_UPI0000661128 Cluster: Homolog of Brachydanio rerio "Pr... 33 2.6
UniRef50_UPI0000DA1B06 Cluster: PREDICTED: hypothetical protein ... 32 3.4
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 32 3.4
UniRef50_UPI0000E1FDBE Cluster: PREDICTED: hypothetical protein;... 32 4.5
UniRef50_A1DDG4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.0
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 31 6.0
UniRef50_A3UJE5 Cluster: TPR domain protein; n=1; Oceanicaulis a... 31 7.9
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 129 bits (312), Expect = 2e-29
Identities = 64/110 (58%), Positives = 77/110 (70%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG-- 61
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
GK N+ G+ VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 -GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 127 bits (307), Expect = 7e-29
Identities = 61/110 (55%), Positives = 75/110 (68%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ + FY GK CVYVY+A+ + +P P
Sbjct: 49 RLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVPQHP 108
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
+K + G+ VRA+F NLP AMGHRIR+MLYPSRI
Sbjct: 109 E-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 124 bits (299), Expect = 6e-28
Identities = 62/110 (56%), Positives = 74/110 (67%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RLY KA FTGY+RGLRNQHE+TALL+++G +R FY GK CVYVYRA+K+ P
Sbjct: 21 RLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEKKKVFP--R 78
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
R K + G+ P VRA+FK NLPA AMG RIRVMLYPSR+
Sbjct: 79 RQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKRIRVMLYPSRV 128
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 109 bits (262), Expect = 2e-23
Identities = 54/110 (49%), Positives = 70/110 (63%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RLYA+A+FTG+KRG RNQH NT+LL +E + DA FY GK CV++Y+AK + P
Sbjct: 65 RLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKTKELKPHSK 124
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
R K++ G+ P VRAKF NLPA MG ++R+MLYPS I
Sbjct: 125 R--KSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 172
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 106 bits (254), Expect = 2e-22
Identities = 55/110 (50%), Positives = 71/110 (64%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RLY KA+FTG+KRGLR Q E+T+LLK+EG ++ DA FYAGK VY+Y+A +T G
Sbjct: 17 RLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTGHT 76
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
+ +A G+ P VRAKF N+P A+G RIRV+LYPS I
Sbjct: 77 VATRTRA--IWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 101 bits (242), Expect = 5e-21
Identities = 50/97 (51%), Positives = 65/97 (67%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL+ KAVFTGY RGLRNQHE+TALL++EG ++ D FY GK C YVY+AK++T P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKT---P 60
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAM 298
RG+ N+ G+ VRA FK+NLPA+A+
Sbjct: 61 RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 92.7 bits (220), Expect = 2e-18
Identities = 48/88 (54%), Positives = 57/88 (64%)
Frame = +2
Query: 74 ALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKNQAACYLGQGDPPTWQLW 253
ALLK+EG R++ FY GK C YVY+AK T PGG K N+ G+
Sbjct: 2 ALLKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSS 58
Query: 254 RVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 59 MVRAKFRSNLPAKAIGHRIRVMLYPSRI 86
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 91.5 bits (217), Expect = 5e-18
Identities = 44/110 (40%), Positives = 64/110 (58%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RLY + GYKR NQ+E T+L+++EG + D +YAGK Y+Y+AK ++
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS------ 64
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
+ + C G+ P VRAKFKSNLP ++MG ++RV +YPS I
Sbjct: 65 --SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI 112
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 80.6 bits (190), Expect = 1e-14
Identities = 44/111 (39%), Positives = 60/111 (54%)
Frame = +2
Query: 5 TRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 184
TRLY + + GYKR NQ+ +T+L+K+EG D FY GK YVY+AK + G
Sbjct: 7 TRLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFYGGKKLCYVYKAKTKKQ---G 63
Query: 185 PRGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
+ G VRAKFKS+LP+ ++G ++R MLYPS I
Sbjct: 64 TAYRTIWGKVMRAHGTSGV-----VRAKFKSHLPSNSIGGKVRCMLYPSNI 109
Score = 31.9 bits (69), Expect = 4.5
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3
Query: 201 TKLRAIWGKVTRPHGNSGV 257
T R IWGKV R HG SGV
Sbjct: 64 TAYRTIWGKVMRAHGTSGV 82
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 79.4 bits (187), Expect = 2e-14
Identities = 45/113 (39%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAK--KRTPIPG 181
RLY K GY RGL Q + TAL++VE R DA +Y GK YVY K KR
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKRCVRWS 91
Query: 182 GPRGKKNQAACYLGQGDPPTWQLWRVRAKFK-SNLPAQAMGHRIRVMLYPSRI 337
+++ G+ P +R KF +++PA A+G RIRV LYPS+I
Sbjct: 92 KAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIGRRIRVYLYPSQI 144
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 74.1 bits (174), Expect = 9e-13
Identities = 41/110 (37%), Positives = 55/110 (50%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RLY K V GYKR RNQ N L+ + + A FY GK YVYR K
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFYVGKKIAYVYRTNKHHD----- 99
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
G K C G+ +RA+F++N+P +A G R+R+++YPS I
Sbjct: 100 -GVK--IKCIWGKVCRTHGNSGVIRARFRTNIPPKAFGDRVRILMYPSNI 146
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 72.5 bits (170), Expect = 3e-12
Identities = 41/111 (36%), Positives = 59/111 (53%)
Frame = +2
Query: 5 TRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 184
+RLY K G+KRG RN N +LL++EG ++ A Y GK YVY+AK+ G
Sbjct: 76 SRLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKREI---NG 132
Query: 185 PRGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
R + G+ V++KF++NLPA+ G R+ML+PS I
Sbjct: 133 SRVRVIWGRISRSHGNSGA-----VKSKFRTNLPAKTFGASCRIMLFPSNI 178
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 71.7 bits (168), Expect = 5e-12
Identities = 40/110 (36%), Positives = 56/110 (50%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
++Y+K V GY+R Q+ N +L+K+EG R D+ FY GK V + K P G
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGH 62
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
+ + G V+A+F NLP +AMG +RVMLYPS I
Sbjct: 63 KISWGKICKTHGSSGV-------VQARFARNLPPKAMGAPVRVMLYPSNI 105
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 70.5 bits (165), Expect = 1e-11
Identities = 42/110 (38%), Positives = 55/110 (50%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RLY K Y+R R + N +L+K+EG +A FY GK YVYRA K
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEV------ 59
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
RG K + G+ VRA F++NLPA+ G +R+ LYPS I
Sbjct: 60 RGSKIRV--MWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 66.9 bits (156), Expect = 1e-10
Identities = 40/109 (36%), Positives = 56/109 (51%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL+ KAVFTG++R Q+EN ALLK+E D + FY GK Y+Y+A +
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFYWGKRVAYIYKAHS---LKNNT 84
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSR 334
+ + G V A+F NLP +A+G +RV LYP+R
Sbjct: 85 KFRAIWGRISKSHGSNGV-----VTARFGRNLPPRAIGSTLRVFLYPNR 128
Score = 33.5 bits (73), Expect = 1.5
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +3
Query: 201 TKLRAIWGKVTRPHGNSGV 257
TK RAIWG++++ HG++GV
Sbjct: 84 TKFRAIWGRISKSHGSNGV 102
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 61.7 bits (143), Expect = 5e-09
Identities = 40/110 (36%), Positives = 57/110 (51%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
+L+ A F ++R R N ALL+++G + +A FYAGK V++ K+ I G
Sbjct: 6 KLFVPATFVSFRRSKRIIKPNQALLEIQGVVSKEEAQFYAGKKVASVWKFDKQEFINWG- 64
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
+ Q P VRAKF+ NLP Q +G ++RVMLYPS I
Sbjct: 65 ---------VITQ---PHGNSGVVRAKFEKNLPPQMLGKQVRVMLYPSTI 102
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 60.1 bits (139), Expect = 1e-08
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +2
Query: 44 RGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKNQAACYLG 223
R NQ+E T+L+++EG + D +YAGK Y+Y+AK ++ + + C G
Sbjct: 43 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWG 94
Query: 224 QGDPPTWQLWRVRAKFKSNLPAQAM 298
+ P VRAKFKSNLP ++M
Sbjct: 95 KVTRPHGNSGVVRAKFKSNLPPESM 119
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 56.0 bits (129), Expect = 2e-07
Identities = 34/99 (34%), Positives = 51/99 (51%)
Frame = +2
Query: 41 KRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKNQAACYL 220
++G+ + +L+K++G A FY GK +VYRAK+ RG +
Sbjct: 29 RQGIWEADTSYSLIKIDGVDSTEAANFYLGKKVAFVYRAKREV------RGSNIRVIW-- 80
Query: 221 GQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
G+ P VRA+F+ NLP ++ G +RVMLYPS I
Sbjct: 81 GKVTRPHGNSGVVRAQFRHNLPPKSFGATVRVMLYPSNI 119
Score = 39.9 bits (89), Expect = 0.017
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 201 TKLRAIWGKVTRPHGNSGV 257
+ +R IWGKVTRPHGNSGV
Sbjct: 74 SNIRVIWGKVTRPHGNSGV 92
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 55.6 bits (128), Expect = 3e-07
Identities = 26/54 (48%), Positives = 34/54 (62%)
Frame = +2
Query: 2 GTRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKK 163
G RLY K Y+RG R + NT+L+K+EG +D A FY GK +VYRAK+
Sbjct: 6 GHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKR 59
Score = 32.3 bits (70), Expect = 3.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 201 TKLRAIWGKVTRPHGNSG 254
+K+R IWGKVTR HG G
Sbjct: 64 SKIRVIWGKVTRTHGQLG 81
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 53.6 bits (123), Expect = 1e-06
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHC---VYVYRAKKRTPIP 178
RL++KAVF GYKRG RNQ E+TALLK+E ++ FY K + RAK ++ +P
Sbjct: 4 RLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFYLDKKAHGNSGMVRAKFQSNLP 63
Query: 179 GGPRGKKNQAACY 217
G Q Y
Sbjct: 64 AKAIGHGIQVMLY 76
Score = 47.2 bits (107), Expect = 1e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 257 VRAKFKSNLPAQAMGHRIRVMLYPSRI 337
VRAKF+SNLPA+A+GH I+VMLYPS I
Sbjct: 54 VRAKFQSNLPAKAIGHGIQVMLYPSSI 80
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 48.4 bits (110), Expect = 5e-05
Identities = 33/103 (32%), Positives = 48/103 (46%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
+ + A+F GY+R Q EN AL+KV G R + G+ + + +K PI
Sbjct: 7 KTFLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGR-LIAIIHSKSGKPI---- 61
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRV 316
G+ P VRA+F +NLP Q MGH++RV
Sbjct: 62 ----------FGKICRPHGNSGMVRARFYTNLPGQLMGHKVRV 94
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 33.9 bits (74), Expect = 1.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 83 KVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGK 196
+ EG R++ + K C YVY+AK PGG K
Sbjct: 49 RAEGVYARDETELHLAKRCAYVYKAKISAVTPGGKTNK 86
>UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15;
Staphylococcus|Rep: Cassette chromosome recombinase C -
Staphylococcus aureus
Length = 559
Score = 33.5 bits (73), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 26 VFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKH 136
V+ GY R N H+N A+ + G D+ND + GKH
Sbjct: 233 VYKGYVRF--NNHQNWAVQRRSGKSDKNDVILVKGKH 267
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 33.1 bits (72), Expect = 2.0
Identities = 31/110 (28%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Frame = +2
Query: 5 TRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKH--CVYVYRAKKRTPIP 178
+R A F +KRG R H LLK+ +++A Y G C +R P+
Sbjct: 12 SRTTIPATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYPVH 71
Query: 179 GG-PRGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLY 325
G R N A VRA+F NL + +G + V LY
Sbjct: 72 GVITRIHGNSGA---------------VRARFTRNLDPKLLGTHVFVKLY 106
>UniRef50_UPI0000D57120 Cluster: PREDICTED: similar to CG13648-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG13648-PA - Tribolium castaneum
Length = 2645
Score = 32.7 bits (71), Expect = 2.6
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 168 HQFPEVPVAKKTKLRAIWGKVTRPHGNSGVSEPSSSLTSLPRLWDTEYE 314
H+FP++PV ++ + + GKVT + +E T PR+ E++
Sbjct: 1155 HRFPQMPVEEEQETESAIGKVTTEQPSEKETETPQQATEAPRIPSGEFD 1203
>UniRef50_UPI0000661128 Cluster: Homolog of Brachydanio rerio
"Prognosticated neural developmental protein.; n=1;
Takifugu rubripes|Rep: Homolog of Brachydanio rerio
"Prognosticated neural developmental protein. - Takifugu
rubripes
Length = 405
Score = 32.7 bits (71), Expect = 2.6
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 21 RPYSQDISVVYATSTRTPLSSR-LKEQKTVMMQSFMLASIASMCTELRRGHQFPEVPVAK 197
RP+S + VV LSSR L+EQ + +M + A +A +C + G+ ++ +++
Sbjct: 317 RPWSVSVLVVVVVLDMAALSSRALQEQLSAIMGALTKAVVAEICELVDEGYALLQMEISR 376
Query: 198 KTK 206
K
Sbjct: 377 SRK 379
>UniRef50_UPI0000DA1B06 Cluster: PREDICTED: hypothetical protein
isoform 1; n=1; Rattus norvegicus|Rep: PREDICTED:
hypothetical protein isoform 1 - Rattus norvegicus
Length = 174
Score = 32.3 bits (70), Expect = 3.4
Identities = 23/89 (25%), Positives = 35/89 (39%)
Frame = -2
Query: 277 RLELGSDTPELPCGRVTLPQIARSLVFFATGTSGNWCPLLSSVHIDAMLASIKDCIITVF 98
RLEL T CG + + R+ F G CPL +V ++ ++ +
Sbjct: 8 RLELVLFTAAFLCGALAAAALTRTQASF-----GGSCPLYGAVALNGTYLALSHPSASSL 62
Query: 97 CSFNLEESGVLVLVA*TTLISCEYGLCVQ 11
C F SG+L L L Y C++
Sbjct: 63 CYFVAGASGILALYCLLLLFFWVYSSCIE 91
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 32.3 bits (70), Expect = 3.4
Identities = 34/110 (30%), Positives = 45/110 (40%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
R+Y + GY+ G Q+E L++V+G DR A G +Y
Sbjct: 7 RVYT-GIILGYRLGSNTQYEKQVLIRVDGVNDRASASRLIGWKVLY-------------R 52
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
GK N+ Y G+ V A FK NLP QA G V +YP I
Sbjct: 53 DGKGNE---YRGKIVHVHGSKGVVIAVFKPNLPGQARGG--NVYIYPKGI 97
>UniRef50_UPI0000E1FDBE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 73
Score = 31.9 bits (69), Expect = 4.5
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 185 PRGKKNQAACYLGQGDPPTWQLW 253
P+ ++++A +LG G PP+W+LW
Sbjct: 10 PQVREHEACHHLGSGLPPSWELW 32
>UniRef50_A1DDG4 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 516
Score = 31.5 bits (68), Expect = 6.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -2
Query: 232 VTLPQIARSLVFFATGTSG-NWCPLLSSVHIDAMLASIKDCIITVFCSFNLEESGVLVLV 56
+ +PQ AR LVF G +G W P +S S + C+I C+ L + + +L+
Sbjct: 280 IGVPQCARPLVFHVEGLAGEQWAPYPNS---QPATTSHESCLINSLCNLTLIVNDICLLL 336
Query: 55 A 53
+
Sbjct: 337 S 337
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 31.5 bits (68), Expect = 6.0
Identities = 25/100 (25%), Positives = 39/100 (39%)
Frame = +2
Query: 20 KAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 199
K V Y+R NQH N ++K R +A G+ ++ P GK
Sbjct: 4 KGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIW-----------KSPSGKL 52
Query: 200 NQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVM 319
+ G VRA+F+ LP QA+G + ++
Sbjct: 53 LKGKIVRVHGTKGA-----VRARFEKGLPGQALGDYVEII 87
>UniRef50_A3UJE5 Cluster: TPR domain protein; n=1; Oceanicaulis
alexandrii HTCC2633|Rep: TPR domain protein -
Oceanicaulis alexandrii HTCC2633
Length = 566
Score = 31.1 bits (67), Expect = 7.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 218 LGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLY 325
L +GD P W R+ + + +PAQ HR V+ Y
Sbjct: 151 LARGDAPAWTQTRIHLESEDMIPAQQQMHRALVLDY 186
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,628,958
Number of Sequences: 1657284
Number of extensions: 8528660
Number of successful extensions: 22628
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 22087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22597
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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