Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20022
(392 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 129 3e-30
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 129 3e-30
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 129 3e-30
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 129 3e-30
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 129 3e-30
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 126 2e-29
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 86 4e-17
X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a pr... 36 0.048
AJ579146-1|CAE45400.1| 120|Homo sapiens immunoglobulin heavy ch... 31 1.8
BC146825-1|AAI46826.1| 517|Homo sapiens FOXN4 protein protein. 29 4.1
BC121164-1|AAI21165.1| 595|Homo sapiens C14orf101 protein protein. 29 4.1
BC121163-1|AAI21164.1| 409|Homo sapiens C14orf101 protein protein. 29 4.1
AF425597-1|AAL23950.1| 218|Homo sapiens forkhead/winged helix t... 29 4.1
AF425596-1|AAL23949.1| 448|Homo sapiens forkhead/winged helix t... 29 4.1
BC098586-1|AAH98586.1| 995|Homo sapiens PHLDB1 protein protein. 29 7.2
AK074070-1|BAB84896.1| 1326|Homo sapiens FLJ00141 protein protein. 29 7.2
AB177859-1|BAD66837.1| 1125|Homo sapiens KIAA0638 splice variant... 29 7.2
AB094090-1|BAC76044.1| 1377|Homo sapiens DLNB07 protein. 29 7.2
AB014538-1|BAA31613.2| 1384|Homo sapiens KIAA0638 protein protein. 29 7.2
AJ402448-1|CAC15735.1| 90|Homo sapiens immunoglobulin heavy ch... 28 9.5
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 129 bits (312), Expect = 3e-30
Identities = 64/110 (58%), Positives = 77/110 (70%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG-- 61
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
GK N+ G+ VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 -GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 129 bits (312), Expect = 3e-30
Identities = 64/110 (58%), Positives = 77/110 (70%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG-- 61
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
GK N+ G+ VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 -GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 129 bits (312), Expect = 3e-30
Identities = 64/110 (58%), Positives = 77/110 (70%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG-- 61
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
GK N+ G+ VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 -GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 129 bits (312), Expect = 3e-30
Identities = 64/110 (58%), Positives = 77/110 (70%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG-- 61
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
GK N+ G+ VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 -GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 129 bits (312), Expect = 3e-30
Identities = 64/110 (58%), Positives = 77/110 (70%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG-- 61
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
GK N+ G+ VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 -GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 126 bits (305), Expect = 2e-29
Identities = 63/110 (57%), Positives = 76/110 (69%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C YVY+AK T PG
Sbjct: 4 RLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG-- 61
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQAMGHRIRVMLYPSRI 337
GK N+ G+ V AKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 62 -GKPNKTRVIWGKVTRAHGNSGMVLAKFRSNLPAKAIGHRIRVMLYPSRI 110
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/96 (46%), Positives = 59/96 (61%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 187
RL++K+ F GYKR L+NQ E+TALLK+EG +++ FY GK C VY+AK T IPG
Sbjct: 3 RLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG-- 60
Query: 188 RGKKNQAACYLGQGDPPTWQLWRVRAKFKSNLPAQA 295
K N++ G+ V AKF SNLPA+A
Sbjct: 61 -SKPNKSRVIWGKVTRAHRNSGMVAAKFHSNLPAKA 95
>X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a
protein.
Length = 21
Score = 35.9 bits (79), Expect = 0.048
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2
Query: 8 RLYAKAVFTGYKRGLRNQ 61
RL++KA+F GYKRGLRNQ
Sbjct: 4 RLWSKAIFAGYKRGLRNQ 21
>AJ579146-1|CAE45400.1| 120|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 120
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 2 GTRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCVY 145
G+ YA +V G R+ ENT L++ + + AV+Y ++C Y
Sbjct: 56 GSTFYANSV-KGRFTISRDNSENTLYLQMNSLRAEDTAVYYCARYCTY 102
>BC146825-1|AAI46826.1| 517|Homo sapiens FOXN4 protein protein.
Length = 517
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 243 HVGGSPCPR*HAAWFFLPRGPPGIG 169
HVG +P P H PRG PG+G
Sbjct: 87 HVGATPSPLLHGPAGMAPRGMPGLG 111
>BC121164-1|AAI21165.1| 595|Homo sapiens C14orf101 protein protein.
Length = 595
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 173 IPGGPRGKKNQAACYLGQGDPPTWQLWRVRAKFKSNL-PAQAMGHRIRVM 319
+PGG G+ AA LG PP + L+ + AK L P ++ +R+ ++
Sbjct: 48 VPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAITLFPFGSIAYRVNLL 97
>BC121163-1|AAI21164.1| 409|Homo sapiens C14orf101 protein protein.
Length = 409
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 173 IPGGPRGKKNQAACYLGQGDPPTWQLWRVRAKFKSNL-PAQAMGHRIRVM 319
+PGG G+ AA LG PP + L+ + AK L P ++ +R+ ++
Sbjct: 48 VPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAITLFPFGSIAYRVNLL 97
>AF425597-1|AAL23950.1| 218|Homo sapiens forkhead/winged helix
transcription factor FOXN4 protein.
Length = 218
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 243 HVGGSPCPR*HAAWFFLPRGPPGIG 169
HVG +P P H PRG PG+G
Sbjct: 47 HVGATPSPLLHGPAGMAPRGMPGLG 71
>AF425596-1|AAL23949.1| 448|Homo sapiens forkhead/winged helix
transcription factor FOXN4 protein.
Length = 448
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 243 HVGGSPCPR*HAAWFFLPRGPPGIG 169
HVG +P P H PRG PG+G
Sbjct: 47 HVGATPSPLLHGPAGMAPRGMPGLG 71
>BC098586-1|AAH98586.1| 995|Homo sapiens PHLDB1 protein protein.
Length = 995
Score = 28.7 bits (61), Expect = 7.2
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 66 RTPLSSRLKEQKTVMMQSFMLASIASMCTELRR---GHQFPEVP-VAKKTKLRAIWGKVT 233
R RL+EQ+ ++ L +I ++C E R G + E+P + + T A+ G+
Sbjct: 594 RRQRQERLREQEMERLERQRLETILNLCAEYSRADGGPEAGELPSIGEATAALALAGR-- 651
Query: 234 RP-HGNSGVSEPSSSL--TSLPRLWDT 305
RP G +G S SS + RLW++
Sbjct: 652 RPSRGLAGASGRSSEEPGVATQRLWES 678
>AK074070-1|BAB84896.1| 1326|Homo sapiens FLJ00141 protein protein.
Length = 1326
Score = 28.7 bits (61), Expect = 7.2
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 66 RTPLSSRLKEQKTVMMQSFMLASIASMCTELRR---GHQFPEVP-VAKKTKLRAIWGKVT 233
R RL+EQ+ ++ L +I ++C E R G + E+P + + T A+ G+
Sbjct: 601 RRQRQERLREQEMERLERQRLETILNLCAEYSRADGGPEAGELPSIGEATAALALAGR-- 658
Query: 234 RP-HGNSGVSEPSSSL--TSLPRLWDT 305
RP G +G S SS + RLW++
Sbjct: 659 RPSRGLAGASGRSSEEPGVATQRLWES 685
>AB177859-1|BAD66837.1| 1125|Homo sapiens KIAA0638 splice variant 2
protein.
Length = 1125
Score = 28.7 bits (61), Expect = 7.2
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 66 RTPLSSRLKEQKTVMMQSFMLASIASMCTELRR---GHQFPEVP-VAKKTKLRAIWGKVT 233
R RL+EQ+ ++ L +I ++C E R G + E+P + + T A+ G+
Sbjct: 338 RRQRQERLREQEMERLERQRLETILNLCAEYSRADGGPEAGELPSIGEATAALALAGR-- 395
Query: 234 RP-HGNSGVSEPSSSL--TSLPRLWDT 305
RP G +G S SS + RLW++
Sbjct: 396 RPSRGLAGASGRSSEEPGVATQRLWES 422
>AB094090-1|BAC76044.1| 1377|Homo sapiens DLNB07 protein.
Length = 1377
Score = 28.7 bits (61), Expect = 7.2
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 66 RTPLSSRLKEQKTVMMQSFMLASIASMCTELRR---GHQFPEVP-VAKKTKLRAIWGKVT 233
R RL+EQ+ ++ L +I ++C E R G + E+P + + T A+ G+
Sbjct: 594 RRQRQERLREQEMERLERQRLETILNLCAEYSRADGGPEAGELPSIGEATAALALAGR-- 651
Query: 234 RP-HGNSGVSEPSSSL--TSLPRLWDT 305
RP G +G S SS + RLW++
Sbjct: 652 RPSRGLAGASGRSSEEPGVATQRLWES 678
>AB014538-1|BAA31613.2| 1384|Homo sapiens KIAA0638 protein protein.
Length = 1384
Score = 28.7 bits (61), Expect = 7.2
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 66 RTPLSSRLKEQKTVMMQSFMLASIASMCTELRR---GHQFPEVP-VAKKTKLRAIWGKVT 233
R RL+EQ+ ++ L +I ++C E R G + E+P + + T A+ G+
Sbjct: 601 RRQRQERLREQEMERLERQRLETILNLCAEYSRADGGPEAGELPSIGEATAALALAGR-- 658
Query: 234 RP-HGNSGVSEPSSSL--TSLPRLWDT 305
RP G +G S SS + RLW++
Sbjct: 659 RPSRGLAGASGRSSEEPGVATQRLWES 685
>AJ402448-1|CAC15735.1| 90|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 90
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 53 RNQHENTALLKVEGAKDRNDAVFYAGKHCVY 145
R+ +NTA L++ K + AV+Y +H Y
Sbjct: 44 RDDSKNTAYLQMNSLKTEDTAVYYCTRHMYY 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,112,047
Number of Sequences: 237096
Number of extensions: 1477779
Number of successful extensions: 9183
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9166
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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