Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20021
         (476 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   3.1  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   3.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.2  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.6  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = -2

Query: 265 SDCTWTAIFSLRRIPKDRTVYLALENTGCFL*VAPTPWRHESACHRIHQHRC 110
           ++ ++ +++S      +    L LEN GC L   P  +     C R +  RC
Sbjct: 353 ANLSYYSVYSRNNCELECEAKLILENCGCVLYYLPKLYEDTKICSRANA-RC 403


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = -2

Query: 265 SDCTWTAIFSLRRIPKDRTVYLALENTGCFL*VAPTPWRHESACHRIHQHRC 110
           ++ ++ +++S      +    L LEN GC L   P  +     C R +  RC
Sbjct: 353 ANLSYYSVYSRNNCELECEAKLILENCGCVLYYLPKLYEDTKICSRANA-RC 403


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 230 TDTKRPHCIPSLGKYR 183
           TD +RPHCI   G  R
Sbjct: 326 TDCERPHCITGDGVRR 341



 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 307 EYELRRDNFSATGNFGFGIQEHIDLG 384
           E  +   N +   + GFGIQ   DLG
Sbjct: 626 ELSIENHNLTVIASDGFGIQPLEDLG 651


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 11/56 (19%), Positives = 29/56 (51%)
 Frame = +1

Query: 268  AKAEEILRXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 435
            A ++E+     + +++L  +N  +  NF FG+     L ++++ +  +  ++ Y V
Sbjct: 3259 ALSDELEESRHILQHKLYSNNSQSLNNFKFGLHTQEILPLQFNKASSMATINEYRV 3314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,515
Number of Sequences: 2352
Number of extensions: 9879
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)