Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20021
(476 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 177 2e-44
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 177 2e-44
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 177 2e-44
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 177 2e-44
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 177 2e-44
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 177 2e-44
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 175 7e-44
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 169 3e-42
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 161 2e-39
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 64 2e-10
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 177 bits (431), Expect = 2e-44
Identities = 92/142 (64%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTG + F +
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIG
Sbjct: 65 NEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIG 124
Query: 409 IYGLDFYVVLCRPGFNVAHRRR 474
IYGLDFYVVL RPGF++A ++R
Sbjct: 125 IYGLDFYVVLGRPGFSIADKKR 146
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 177 bits (431), Expect = 2e-44
Identities = 92/142 (64%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTG + F +
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 63
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIG
Sbjct: 64 NEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIG 123
Query: 409 IYGLDFYVVLCRPGFNVAHRRR 474
IYGLDFYVVL RPGF++A ++R
Sbjct: 124 IYGLDFYVVLGRPGFSIADKKR 145
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 177 bits (431), Expect = 2e-44
Identities = 92/142 (64%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTG + F +
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 62
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIG
Sbjct: 63 NEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIG 122
Query: 409 IYGLDFYVVLCRPGFNVAHRRR 474
IYGLDFYVVL RPGF++A ++R
Sbjct: 123 IYGLDFYVVLGRPGFSIADKKR 144
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 177 bits (431), Expect = 2e-44
Identities = 92/142 (64%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTG + F +
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIG
Sbjct: 65 NEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIG 124
Query: 409 IYGLDFYVVLCRPGFNVAHRRR 474
IYGLDFYVVL RPGF++A ++R
Sbjct: 125 IYGLDFYVVLGRPGFSIADKKR 146
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 177 bits (431), Expect = 2e-44
Identities = 92/142 (64%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTG + F +
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 62
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIG
Sbjct: 63 NEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIG 122
Query: 409 IYGLDFYVVLCRPGFNVAHRRR 474
IYGLDFYVVL RPGF++A ++R
Sbjct: 123 IYGLDFYVVLGRPGFSIADKKR 144
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 177 bits (431), Expect = 2e-44
Identities = 92/142 (64%), Positives = 107/142 (75%), Gaps = 2/142 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTG + F +
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 63
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIG
Sbjct: 64 NEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIG 123
Query: 409 IYGLDFYVVLCRPGFNVAHRRR 474
IYGLDFYVVL RPGF++A ++R
Sbjct: 124 IYGLDFYVVLGRPGFSIADKKR 145
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 175 bits (426), Expect = 7e-44
Identities = 91/142 (64%), Positives = 106/142 (74%), Gaps = 2/142 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESGDRL RAAKVLEQLTG + F +
Sbjct: 4 QGEKENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRR 63
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIG
Sbjct: 64 NEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIG 123
Query: 409 IYGLDFYVVLCRPGFNVAHRRR 474
IYGLDFYVVL RPGF++A ++R
Sbjct: 124 IYGLDFYVVLGRPGFSIADKKR 145
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 169 bits (412), Expect = 3e-42
Identities = 89/142 (62%), Positives = 105/142 (73%), Gaps = 2/142 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESG RLTRAAKVLEQLTG + F +
Sbjct: 5 QGEKENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 64
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVRE ELR++NFS TGNFGFGIQEHIDLGI+YDPSIG
Sbjct: 65 NEKIAVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIG 124
Query: 409 IYGLDFYVVLCRPGFNVAHRRR 474
IYGLDFYVVL RPGF++A ++R
Sbjct: 125 IYGLDFYVVLGRPGFSIADKKR 146
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 161 bits (390), Expect = 2e-39
Identities = 85/129 (65%), Positives = 96/129 (74%), Gaps = 2/129 (1%)
Frame = +1
Query: 55 EDNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPRLGIQCGLLVSVV 234
+ +N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTG + F +
Sbjct: 3 QGEKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRR 62
Query: 235 MKRLLSMYSPR-AKAEEIL-RXFKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 408
+++ + R AKAEEIL + KVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIG
Sbjct: 63 NEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIG 122
Query: 409 IYGLDFYVV 435
IYGLDFYVV
Sbjct: 123 IYGLDFYVV 131
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 64.5 bits (150), Expect = 2e-10
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +1
Query: 91 IRKLCLNICVGESGDRLTRAAKVLEQLTGNSLYFPR 198
IRKLCLNICVGESGDRLTRAAKVLEQLTG + F +
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,038,711
Number of Sequences: 237096
Number of extensions: 1376672
Number of successful extensions: 6594
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6576
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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