Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20020
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B60D6 Cluster: PREDICTED: similar to GA11007-PA...    48   3e-04
UniRef50_Q7PTV7 Cluster: ENSANGP00000002136; n=4; Endopterygota|...    47   4e-04
UniRef50_A5TT85 Cluster: Possible M23B family beta-lytic metallo...    34   4.0  
UniRef50_A3WLF8 Cluster: Signal transduction histidine kinase; n...    34   4.0  
UniRef50_Q6FMA5 Cluster: Protein FYV6; n=1; Candida glabrata|Rep...    34   4.0  
UniRef50_A0E540 Cluster: Chromosome undetermined scaffold_79, wh...    33   5.3  

>UniRef50_UPI00015B60D6 Cluster: PREDICTED: similar to GA11007-PA;
          n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
          GA11007-PA - Nasonia vitripennis
          Length = 198

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = +3

Query: 12 NRKFTSPEELEEQRKHDEQKKKWRKEQ 92
          NR FT+PEELEEQR+ +E+K+KWRK +
Sbjct: 13 NRHFTNPEELEEQRRQEEEKRKWRKNK 39


>UniRef50_Q7PTV7 Cluster: ENSANGP00000002136; n=4;
          Endopterygota|Rep: ENSANGP00000002136 - Anopheles
          gambiae str. PEST
          Length = 169

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +3

Query: 12 NRKFTSPEELEEQRKHDEQKKKWRK 86
          NR FT+PEELE QRK DE++KKWRK
Sbjct: 13 NRNFTNPEELEAQRKKDEEEKKWRK 37


>UniRef50_A5TT85 Cluster: Possible M23B family beta-lytic
           metallopeptidase; n=3; Fusobacterium nucleatum|Rep:
           Possible M23B family beta-lytic metallopeptidase -
           Fusobacterium nucleatum subsp. polymorphum ATCC 10953
          Length = 411

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +3

Query: 345 IRSFTLKVKRSKRALTSLDSPSFANNAKKQLSAERQRKNLKKILQL-KKGRQSSLY*LQE 521
           I+    K++  KR L  L++     N +K  + + ++K LK+ LQ+ KKG QSS+  L++
Sbjct: 161 IKEVKEKIEAEKRKLDRLEA-ELRENLRKSDAKKEEQKKLKEQLQVEKKGHQSSIEKLKK 219

Query: 522 E 524
           E
Sbjct: 220 E 220


>UniRef50_A3WLF8 Cluster: Signal transduction histidine kinase; n=1;
           Idiomarina baltica OS145|Rep: Signal transduction
           histidine kinase - Idiomarina baltica OS145
          Length = 466

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = -1

Query: 401 VERGQRALAPFYLQREASDRLQPLAGVLSPHVHVLT 294
           + R  RALA F+ QR A+DR Q +A V    VHV+T
Sbjct: 328 MNRWTRALADFHQQRHANDR-QTIAAVCDDDVHVIT 362


>UniRef50_Q6FMA5 Cluster: Protein FYV6; n=1; Candida glabrata|Rep:
           Protein FYV6 - Candida glabrata (Yeast) (Torulopsis
           glabrata)
          Length = 154

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = +3

Query: 327 SERLQPIRSFTLKVKRSKRALTSLDSPSFANNAKKQLSAERQRKNLKKILQLKKGRQSSL 506
           SER + I+   ++ +R KR   +L     AN  KKQ  + R+   +KK+ QL K      
Sbjct: 21  SEREEAIQG-AIETERKKRVRKTLRDQLRANAIKKQKKSNRESAEVKKLNQLSKEETRYF 79

Query: 507 Y*LQEEISSDVCKLT 551
             L++    ++ +LT
Sbjct: 80  KELEKNREQEIQRLT 94


>UniRef50_A0E540 Cluster: Chromosome undetermined scaffold_79, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_79,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 435

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 369 KRSKRALTSLDSPSFANNAKKQLSAERQRKNLKKIL--QLKKGRQSS 503
           K +KRAL + D   F NN K  +  ER RK L++IL  Q ++G  S+
Sbjct: 151 KEAKRALVTQDQVQFVNNCK--IKVERPRKFLERILNPQAREGELSA 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,060,069
Number of Sequences: 1657284
Number of extensions: 5628944
Number of successful extensions: 18775
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18678
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)