Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20019
(587 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17; E... 225 6e-58
UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8; Coel... 210 2e-53
UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;... 199 3e-50
UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus l... 134 1e-30
UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9; Coel... 131 1e-29
UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48; Eu... 55 1e-06
UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome s... 53 6e-06
UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2 (R... 52 8e-06
UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25; Th... 50 3e-05
UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D, ... 48 2e-04
UniRef50_Q0KFU8 Cluster: HR3 isoform B1; n=3; Blattella germanic... 46 5e-04
UniRef50_Q13133 Cluster: Oxysterols receptor LXR-alpha; n=33; Eu... 44 0.003
UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome sh... 43 0.005
UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:... 42 0.011
UniRef50_Q90Y02 Cluster: Peroxisome proliferator-activated recep... 41 0.019
UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whol... 40 0.057
UniRef50_Q4RI90 Cluster: Chromosome 8 SCAF15044, whole genome sh... 40 0.057
UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep: ... 39 0.075
UniRef50_P35398 Cluster: Nuclear receptor ROR-alpha; n=84; Eutel... 39 0.075
UniRef50_P55055 Cluster: Oxysterols receptor LXR-beta; n=23; Eut... 38 0.17
UniRef50_Q2LYQ2 Cluster: GA14768-PA; n=1; Drosophila pseudoobscu... 38 0.23
UniRef50_P45447 Cluster: Ecdysone-induced protein 78C; n=5; Dipt... 37 0.30
UniRef50_UPI0000F2CB6C Cluster: PREDICTED: similar to beta-1,4-N... 36 0.53
UniRef50_Q980S9 Cluster: S-adenosylmethionine synthetase; n=22; ... 34 2.8
UniRef50_P31396 Cluster: Probable nuclear hormone receptor HR3; ... 34 2.8
UniRef50_UPI0000E46516 Cluster: PREDICTED: similar to JAK2 prote... 33 3.7
UniRef50_Q854A9 Cluster: Gp157; n=1; Mycobacterium phage Omega|R... 33 4.9
UniRef50_Q7S8L4 Cluster: Predicted protein; n=1; Neurospora cras... 33 4.9
UniRef50_Q46MW6 Cluster: Methionine adenosyltransferase; n=5; Bu... 33 6.5
UniRef50_Q02CR3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q9FGW9 Cluster: Similarity to kinase; n=1; Arabidopsis ... 32 8.6
>UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17;
Endopterygota|Rep: Ecdysone-inducible protein E75 -
Galleria mellonella (Wax moth)
Length = 711
Score = 225 bits (550), Expect = 6e-58
Identities = 125/188 (66%), Positives = 137/188 (72%), Gaps = 4/188 (2%)
Frame = +2
Query: 2 GTRLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQR 181
G RLLARVVRAHLDTCEFTRDRVA+MR ARDCPTYSQPTLACPLNPAPELQSEKEFSQR
Sbjct: 154 GPRLLARVVRAHLDTCEFTRDRVAAMRNGARDCPTYSQPTLACPLNPAPELQSEKEFSQR 213
Query: 182 FAHVIRGVIDFAGLIPGFQLLTQDEIHAAQKWSV--RCIVRATHLYV*RSS**YHLSQWA 355
FAHVIRGVIDFAGLIPGFQLLTQD+ K + VR ++ + L+
Sbjct: 214 FAHVIRGVIDFAGLIPGFQLLTQDDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQL 273
Query: 356 TDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELV 529
+ + +FLVDSTFKFAERMNSMNLTDAEIGLF R G LRN+ELV
Sbjct: 274 MKRDSIQ-SGANARFLVDSTFKFAERMNSMNLTDAEIGLFCAIVLITPDRPG-LRNVELV 331
Query: 530 ERMHSRLR 553
ERMHSRL+
Sbjct: 332 ERMHSRLK 339
Score = 101 bits (242), Expect = 1e-20
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQSGANASF 401
KFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQSGANA F
Sbjct: 239 KFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQSGANARF 287
Score = 41.1 bits (92), Expect = 0.019
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 472 FLAIVLITPDRPAAKH-RASGKNALATKACLQTVIAQNR 585
F AIVLITPDRP ++ + K+CLQTVIAQNR
Sbjct: 312 FCAIVLITPDRPGLRNVELVERMHSRLKSCLQTVIAQNR 350
>UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8;
Coelomata|Rep: Ecdysone-induced protein 75C - Aedes
aegypti (Yellowfever mosquito)
Length = 1134
Score = 210 bits (513), Expect = 2e-53
Identities = 115/193 (59%), Positives = 138/193 (71%), Gaps = 4/193 (2%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFA 187
RLLA V+RAH+DTCEFTR++V SMR RARDCPTYS PTLACPLNPAPELQSE+EFSQRFA
Sbjct: 374 RLLAAVLRAHMDTCEFTREKVTSMRQRARDCPTYSMPTLACPLNPAPELQSEQEFSQRFA 433
Query: 188 HVIRGVIDFAGLIPGFQLLTQDEIHAAQKWSV--RCIVRATHLYV*RSS**YHLSQWATD 361
HVIRGVIDFAG+IPGFQ+LTQD+ K + VR ++ + + L+
Sbjct: 434 HVIRGVIDFAGMIPGFQMLTQDDKFTLLKAGLFDALFVRLICMFDSQINSIICLNGQVMR 493
Query: 362 EERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELVER 535
+ + +FLVDSTF FAERMNSMNLTDAEIGLF R G LRN+EL+ER
Sbjct: 494 RDTIQ-NGANARFLVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPDRPG-LRNVELIER 551
Query: 536 MHSRLRRACKLSL 574
M+S+L +AC S+
Sbjct: 552 MYSKL-KACLQSI 563
Score = 90.2 bits (214), Expect = 3e-17
Identities = 40/49 (81%), Positives = 47/49 (95%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQSGANASF 401
KFTLLK+GLFDALFVRLICMFD+ +NSIICLNGQ+M+RD+IQ+GANA F
Sbjct: 457 KFTLLKAGLFDALFVRLICMFDSQINSIICLNGQVMRRDTIQNGANARF 505
Score = 38.7 bits (86), Expect = 0.100
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +1
Query: 472 FLAIVLITPDRPAAKHRASGKNALAT-KACLQTVIAQNR 585
F AIVLITPDRP ++ + + KACLQ++++QNR
Sbjct: 530 FCAIVLITPDRPGLRNVELIERMYSKLKACLQSIVSQNR 568
>UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;
n=10; Coelomata|Rep: Ecdysone-induced protein 75B isoform
B - Drosophila melanogaster (Fruit fly)
Length = 1412
Score = 199 bits (486), Expect = 3e-50
Identities = 110/187 (58%), Positives = 134/187 (71%), Gaps = 5/187 (2%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTL-ACPLNPAPELQSEKEFSQRF 184
RLLA V+RAHL+TCEFT+++V++MR RARDCP+YS PTL ACPLNPAPELQSE+EFSQRF
Sbjct: 568 RLLAAVLRAHLETCEFTKEKVSAMRQRARDCPSYSMPTLLACPLNPAPELQSEQEFSQRF 627
Query: 185 AHVIRGVIDFAGLIPGFQLLTQDEIHAAQKWSV--RCIVRATHLYV*RSS**YHLSQWAT 358
AHVIRGVIDFAG+IPGFQLLTQD+ K + VR ++ + L+
Sbjct: 628 AHVIRGVIDFAGMIPGFQLLTQDDKFTLLKAGLFDALFVRLICMFDSSINSIICLNGQVM 687
Query: 359 DEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELVE 532
+ + +FLVDSTF FAERMNSMNLTDAEIGLF R G LRN+EL+E
Sbjct: 688 RRDAIQ-NGANARFLVDSTFNFAERMNSMNLTDAEIGLFCAIVLITPDRPG-LRNLELIE 745
Query: 533 RMHSRLR 553
+M+SRL+
Sbjct: 746 KMYSRLK 752
Score = 90.2 bits (214), Expect = 3e-17
Identities = 40/49 (81%), Positives = 47/49 (95%)
Frame = +3
Query: 255 KFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQSGANASF 401
KFTLLK+GLFDALFVRLICMFD+ +NSIICLNGQ+M+RD+IQ+GANA F
Sbjct: 652 KFTLLKAGLFDALFVRLICMFDSSINSIICLNGQVMRRDAIQNGANARF 700
Score = 38.3 bits (85), Expect = 0.13
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 472 FLAIVLITPDRPAAKH-RASGKNALATKACLQTVIAQNR 585
F AIVLITPDRP ++ K K CLQ ++AQNR
Sbjct: 725 FCAIVLITPDRPGLRNLELIEKMYSRLKGCLQYIVAQNR 763
>UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus
lateralis|Rep: E75 nuclear receptor - Gecarcinus
lateralis (Blackback land crab)
Length = 828
Score = 134 bits (324), Expect = 1e-30
Identities = 86/193 (44%), Positives = 117/193 (60%), Gaps = 11/193 (5%)
Frame = +2
Query: 5 TRLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQ--PTLACPLNPAP-ELQSEKE-- 169
TR+ A ++RAH+DTC+FTRD+VA M +AR P+Y+Q PTLACPLNP P L ++E
Sbjct: 140 TRVTAAIIRAHMDTCDFTRDKVAPMLQQARAHPSYTQCPPTLACPLNPRPVPLHGQQELV 199
Query: 170 --FSQRFAHVIRGVIDFAGLIPGFQLLTQDEIHAAQKWSV--RCIVRATHLYV*RSS**Y 337
FS+RF+ IRGV++FA +PGFQ L Q++ K V +VR ++ R++
Sbjct: 200 QDFSERFSPAIRGVVEFAKRLPGFQQLPQEDQVTLLKAGVFEVLLVRLAAMFDARTNTML 259
Query: 338 HLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLFW--XXXXXXRIGLL 511
L+ E LH +FLVDS F FAER+NS+ L+DAE+ LF R G L
Sbjct: 260 CLNGQLLRREALHTS-VNARFLVDSMFDFAERLNSLCLSDAELALFCAVVVLAPDRPG-L 317
Query: 512 RNIELVERMHSRL 550
RN +LVER+ L
Sbjct: 318 RNAQLVERVQRHL 330
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 37/47 (78%)
Frame = +3
Query: 261 TLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQSGANASF 401
TLLK+G+F+ L VRL MFDA N+++CLNGQL++R+++ + NA F
Sbjct: 233 TLLKAGVFEVLLVRLAAMFDARTNTMLCLNGQLLRREALHTSVNARF 279
>UniRef50_O77245 Cluster: Nuclear hormone receptor E75; n=9;
Coelomata|Rep: Nuclear hormone receptor E75 -
Metapenaeus ensis (Greasyback shrimp) (Sand shrimp)
Length = 606
Score = 131 bits (317), Expect = 1e-29
Identities = 85/193 (44%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Frame = +2
Query: 5 TRLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQ--PTLACPLNPAP-ELQSEKE-- 169
TR+ A ++RAH+DTC+FTRD+VA M +AR P+Y+Q P LACPLNP P L ++E
Sbjct: 140 TRVTAAIIRAHMDTCDFTRDKVAPMLQQARTHPSYTQCPPYLACPLNPRPVPLHGQQELV 199
Query: 170 --FSQRFAHVIRGVIDFAGLIPGFQLLTQDEIHAAQKWSV--RCIVRATHLYV*RSS**Y 337
FS+ IRGV++FA +PGFQ L Q++ K V +VR ++ R++
Sbjct: 200 QDFSEALLPAIRGVVEFAKRLPGFQQLPQEDQVTLLKAGVFEVLLVRLAGMFDARTNAML 259
Query: 338 HLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLFW--XXXXXXRIGLL 511
L+ E LH +FL+DS F FAER+NS+ L DAE+ LF R G L
Sbjct: 260 CLNGQLVRREALHTS-VNARFLMDSMFDFAERVNSLALNDAELALFCAVVVLAPDRPG-L 317
Query: 512 RNIELVERMHSRL 550
RN ELVER+H RL
Sbjct: 318 RNAELVERVHRRL 330
Score = 59.7 bits (138), Expect = 5e-08
Identities = 25/47 (53%), Positives = 37/47 (78%)
Frame = +3
Query: 261 TLLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQSGANASF 401
TLLK+G+F+ L VRL MFDA N+++CLNGQL++R+++ + NA F
Sbjct: 233 TLLKAGVFEVLLVRLAGMFDARTNAMLCLNGQLVRREALHTSVNARF 279
>UniRef50_Q14995 Cluster: Orphan nuclear receptor NR1D2; n=48;
Euteleostomi|Rep: Orphan nuclear receptor NR1D2 - Homo
sapiens (Human)
Length = 579
Score = 54.8 bits (126), Expect = 1e-06
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Frame = +2
Query: 98 CPTYSQPTLACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-D 253
C T + L CP++ +P + K EFS F ++ V++FA IPGF+ L+Q D
Sbjct: 374 CNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHD 433
Query: 254 EIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAE 430
+++ + + + VR L+ + LS + LH L++S F+F+E
Sbjct: 434 QVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLH--SMGAGDLLNSMFEFSE 491
Query: 431 RMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
++N++ L+D E+ LF R G + N+ VE + L RA +
Sbjct: 492 KLNALQLSDEEMSLFTAVVLVSADRSG-IENVNSVEALQETLIRALR 537
Score = 32.7 bits (71), Expect = 6.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQS 383
LLK+G F+ L VR +FDA ++ L+G+ D + S
Sbjct: 437 LLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS 476
>UniRef50_Q4RXZ3 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 720
Score = 52.8 bits (121), Expect = 6e-06
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Frame = +2
Query: 116 PTLACPLNPAPELQSE--KEFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVR 286
P ACP+ PA E FSQ F +R V++FA IPGFQ L+Q D++ + + +
Sbjct: 499 PLNACPVAPASRSSQEVWDSFSQCFTPAVREVVEFAKSIPGFQSLSQHDQVMLLKSGTFQ 558
Query: 287 CI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
+ VR L+ + L+ L L+D+ F F+E++ SM L E
Sbjct: 559 VLMVRFCSLFDAKERAVTFLNGQTYSLASL--RALGMGSLLDAMFDFSEKLGSMGLEPDE 616
Query: 464 IGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACKLSLHR 580
+ LF R G++ ++ VE++ L +A +L+ H+
Sbjct: 617 MALFMAVVLVSADRSGIV-DVGAVEQLQENLIKALRLAHHQ 656
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQS 383
LLKSG F L VR +FDA ++ LNGQ S+++
Sbjct: 551 LLKSGTFQVLMVRFCSLFDAKERAVTFLNGQTYSLASLRA 590
>UniRef50_UPI00004D0DA7 Cluster: Orphan nuclear receptor NR1D2
(Rev-erb-beta) (EAR-1R) (Orphan nuclear hormone receptor
BD73).; n=1; Xenopus tropicalis|Rep: Orphan nuclear
receptor NR1D2 (Rev-erb-beta) (EAR-1R) (Orphan nuclear
hormone receptor BD73). - Xenopus tropicalis
Length = 571
Score = 52.4 bits (120), Expect = 8e-06
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Frame = +2
Query: 113 QPTLACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAA 268
Q L CP++ P + K EFS F ++ V+DFA IPGF+ L+Q D+++
Sbjct: 371 QVLLVCPMSMTPFMDPNKSGTQIWEEFSMSFTPAVKEVVDFAKGIPGFKDLSQHDQVNLL 430
Query: 269 QKWSVRCI-VRATHLYV*RSS**YHLS--QWATDEERLHPERCQCKFLVDSTFKFAERMN 439
+ + + VR L+ + LS +++ DE RL L++S F+F+E+++
Sbjct: 431 KAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDELRL----MGAGDLLNSVFEFSEKLS 486
Query: 440 SMNLTDAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACKLSLHR 580
++ L++ E+ LF R G + N+ VE + L RA + + R
Sbjct: 487 ALQLSEEEMSLFTAVVLVSADRSG-IENVNSVEALQETLLRALRTLIMR 534
>UniRef50_P20393 Cluster: Orphan nuclear receptor NR1D1; n=25;
Theria|Rep: Orphan nuclear receptor NR1D1 - Homo sapiens
(Human)
Length = 614
Score = 50.4 bits (115), Expect = 3e-05
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Frame = +2
Query: 122 LACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKW 277
LACP+N P +S + +FS F +R V++FA IPGF+ L+Q D++ +
Sbjct: 416 LACPMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAG 475
Query: 278 SVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLT 454
+ + VR L+ + LS+ + L L+ + F F+E++NS+ LT
Sbjct: 476 TFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGA--MGMGDLLSAMFDFSEKLNSLALT 533
Query: 455 DAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
+ E+GLF R G + N VE++ L RA +
Sbjct: 534 EEELGLFTAVVLVSADRSG-MENSASVEQLQETLLRALR 571
>UniRef50_Q6TNS3 Cluster: Nuclear receptor subfamily 1, group D,
member 1; n=8; Clupeocephala|Rep: Nuclear receptor
subfamily 1, group D, member 1 - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 637
Score = 48.0 bits (109), Expect = 2e-04
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Frame = +2
Query: 122 LACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKW 277
LACP+N P K +FS F +R V++FA IPGF L+Q D++ +
Sbjct: 440 LACPMNMHPYSDPNKTPQEIWEDFSLSFTPAVREVVEFAKHIPGFSTLSQNDQVTLLKAG 499
Query: 278 SVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLT 454
+ + VR + L+ + +S E L + L+ + F F+E++NS+ L+
Sbjct: 500 TFEVLMVRFSSLFNVKEKTVTFISGATYSLEAL--KSMGMGDLLGTMFDFSEKLNSLELS 557
Query: 455 DAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
E+GLF R G + N+ VE + L RA +
Sbjct: 558 AEELGLFTAVVLVSADRSG-IENVNSVEMLQESLIRALR 595
>UniRef50_Q0KFU8 Cluster: HR3 isoform B1; n=3; Blattella
germanica|Rep: HR3 isoform B1 - Blattella germanica
(German cockroach)
Length = 651
Score = 46.4 bits (105), Expect = 5e-04
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
Frame = +2
Query: 5 TRLLARVVR-AHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQR 181
+ LL++ + AH TC FT + + M + +D L N A E + E +Q+
Sbjct: 405 SELLSKTIADAHARTCLFTTEHIHEMFRKPQDLSK-----LLYYKNMAHE-ELWLECAQK 458
Query: 182 FAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCIVRATHLYV*RSS**YHLSQWAT 358
VI+ +I+FA ++PGF L+Q D+I + S V Y S +
Sbjct: 459 LTTVIQQIIEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYFDLSQNCVLYADTML 518
Query: 359 DEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF--WXXXXXXRIGLLRNIELVE 532
++ + LV F+FA+ + + LT+ E+ L+ R G L+ + +
Sbjct: 519 PQDAFYTTETAEMKLVTCVFEFAKGVAELKLTETELALYSACVLLSADRPG-LKGLAEIG 577
Query: 533 RMHSRLRRACKLSLHR 580
R+ + RA ++ L R
Sbjct: 578 RLSQAVLRALRIELER 593
>UniRef50_Q13133 Cluster: Oxysterols receptor LXR-alpha; n=33;
Euteleostomi|Rep: Oxysterols receptor LXR-alpha - Homo
sapiens (Human)
Length = 447
Score = 43.6 bits (98), Expect = 0.003
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Frame = +2
Query: 104 TYSQPTLACPLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEI 259
++S P AP+ S + QRFAH ++ ++DFA +PGF QL +D+I
Sbjct: 228 SFSDRLRVTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQI 287
Query: 260 HAAQKWSVRCIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERM 436
+ ++ ++ T Y S L ++ + E Q +F ++ F+F+ M
Sbjct: 288 ALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEF-INPIFEFSRAM 346
Query: 437 NSMNLTDAEIGL 472
N + L DAE L
Sbjct: 347 NELQLNDAEFAL 358
>UniRef50_Q4RW38 Cluster: Chromosome 9 SCAF14991, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
SCAF14991, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 539
Score = 43.2 bits (97), Expect = 0.005
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Frame = +2
Query: 98 CPTYSQP---TLACPLNP----APELQSEK---EFSQRFAHVIRGVIDFAGLIPGFQLLT 247
CP P LACPLN PE S++ FSQ F ++ V++FA IPGFQ L+
Sbjct: 294 CPWNLAPGSKVLACPLNAWPVSGPERSSQEIWESFSQCFTPAVKEVVEFAKGIPGFQELS 353
Query: 248 Q-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFK 421
Q D++ + + + + VR L+ + L+ L L+D+ F+
Sbjct: 354 QHDQVMLLKSGTFQVLMVRFCTLFNAENHTVTFLNGQTYPLSTL--RALGMGSLLDAMFE 411
Query: 422 FAERMNSMNLTDAEIGLF 475
F+E++ S+ L E+ LF
Sbjct: 412 FSEKLGSLGLEPDEMALF 429
Score = 32.7 bits (71), Expect = 6.5
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 264 LLKSGLFDALFVRLICMFDAPLNSIICLNGQ 356
LLKSG F L VR +F+A +++ LNGQ
Sbjct: 360 LLKSGTFQVLMVRFCTLFNAENHTVTFLNGQ 390
>UniRef50_Q1L684 Cluster: Rev-erbgamma-A; n=7; Clupeocephala|Rep:
Rev-erbgamma-A - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 462
Score = 41.9 bits (94), Expect = 0.011
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 13/183 (7%)
Frame = +2
Query: 71 ASMRARARDCP---TYSQPTLACPLNP----APELQSEK---EFSQRFAHVIRGVIDFAG 220
AS CP LACPLN AP + S++ FSQ F +R V++FA
Sbjct: 245 ASQSQSPASCPFKLAAGSKVLACPLNACPVSAPGVSSQQVWESFSQCFTPAVREVVEFAK 304
Query: 221 LIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQC 394
IPGFQ L Q D++ + + + + VR L+ + L+ L
Sbjct: 305 GIPGFQELCQHDQVMLLKAGTFQVLMVRFCSLFNHKERSVTFLNGQTYPLGTL--RGLGM 362
Query: 395 KFLVDSTFKFAERMNSMNLTDAEIGLFWXXXXXXR-IGLLRNIELVERMHSRLRRACKLS 571
L+D+ F+F+ +++S+ L E+ LF + ++ VE++ L RA +
Sbjct: 363 GSLLDAMFEFSSKLSSLGLESDEMALFMAVVLVSADCSGISDMLAVEQLQEGLIRALRTL 422
Query: 572 LHR 580
++R
Sbjct: 423 INR 425
>UniRef50_Q90Y02 Cluster: Peroxisome proliferator-activated
receptor; n=1; Petromyzon marinus|Rep: Peroxisome
proliferator-activated receptor - Petromyzon marinus
(Sea lamprey)
Length = 436
Score = 41.1 bits (92), Expect = 0.019
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGFQLLTQDEIHAAQKWSVRCIVRA-TH 307
P A E++ R +R V +FA IPGF +L ++ K+ V ++ A
Sbjct: 231 PPRGAAEIRIFNRCHYRLVEAVREVTEFAKSIPGFMILDLNDQVTLLKYGVYEVIFAMLA 290
Query: 308 LYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLFW--X 481
+ + E L R +++ F+F+ R N+++L ++ L+
Sbjct: 291 AQINKDGLLIAYGSAFITREFLRSLRSPFCHIMEPKFEFSIRFNALSLDGTDLALYMAAI 350
Query: 482 XXXXXRIGLLRNIELVERMHSRLRRACKLSLHRT 583
R GL+ N+ VER+ R+ +A L L +T
Sbjct: 351 ILCGDRPGLI-NVNPVERIQDRILQALDLQLRKT 383
>UniRef50_Q4SGI2 Cluster: Chromosome undetermined SCAF14594, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14594, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 588
Score = 39.5 bits (88), Expect = 0.057
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Frame = +2
Query: 128 CPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSV 283
CP+N + + +K EFS F +R V++FA IPGF+ L+Q D++ + +
Sbjct: 290 CPMNMSAYVDPQKSGQEVWEEFSHSFTPAVREVVEFAKKIPGFRDLSQHDQVSLLKAGTF 349
Query: 284 R-CIVRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDA 460
+VR L+ ++ L + L L++S F F+E++ S+ L++
Sbjct: 350 EVLVVRFASLFDVQNRTVTFLGGRKYSMDAL--RAMGAGDLLNSMFDFSEKLMSLGLSEE 407
Query: 461 EIGLF 475
E+ LF
Sbjct: 408 EMSLF 412
>UniRef50_Q4RI90 Cluster: Chromosome 8 SCAF15044, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 8
SCAF15044, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 503
Score = 39.5 bits (88), Expect = 0.057
Identities = 36/157 (22%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L A +VRAH +T ++ + + +R + +S+ + + + + + + + R
Sbjct: 269 LCASIVRAHRETSQWRVEELQGLRWKL-----FSREEIQAYQSKSVD-EMWQHCAIRLTD 322
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
++ V++FA IPGF++LTQ D+I + S+ + VR + + ++ Y ++A +
Sbjct: 323 AVQYVVEFAKHIPGFRMLTQNDQIALLKTGSMEVVLVRMSRFFNTENNTVYFDGKFAGAD 382
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C L+ + F FA M ++ L++ ++ LF
Sbjct: 383 LF---KSLACGDLITAVFDFAHDMCALKLSEHQLALF 416
>UniRef50_Q90Z65 Cluster: Rev-Erb beta 1; n=5; Euteleostomi|Rep:
Rev-Erb beta 1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 404
Score = 39.1 bits (87), Expect = 0.075
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +2
Query: 164 KEFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**Y 337
+EFS+ F +R V++FA IPGFQ L+Q D+++ + + + VR L+ +
Sbjct: 244 EEFSRSFIPAVREVVEFAKRIPGFQELSQHDQVNLLKAGTFEVLMVRFVPLFDVQQRTVS 303
Query: 338 HLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+S + L L++ F+F+E++ ++ L D E+ LF
Sbjct: 304 FMSGRRYSVDLL--RSMGAGELLNCMFEFSEKLAALQLNDEEMSLF 347
>UniRef50_P35398 Cluster: Nuclear receptor ROR-alpha; n=84;
Euteleostomi|Rep: Nuclear receptor ROR-alpha - Homo
sapiens (Human)
Length = 556
Score = 39.1 bits (87), Expect = 0.075
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 309 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 362
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 363 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 422
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 423 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 456
>UniRef50_P55055 Cluster: Oxysterols receptor LXR-beta; n=23;
Eutheria|Rep: Oxysterols receptor LXR-beta - Homo
sapiens (Human)
Length = 461
Score = 37.9 bits (84), Expect = 0.17
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVR 286
PL P+ + ++ QRFAH ++ ++DFA +PGF QL +D+I + ++
Sbjct: 253 PLGADPQSRDARQ--QRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIE 310
Query: 287 CIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
++ T Y + L + ++ H Q +F ++ F+F+ M + L DAE
Sbjct: 311 IMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIFEFSRAMRRLGLDDAE 369
Query: 464 IGL 472
L
Sbjct: 370 YAL 372
>UniRef50_Q2LYQ2 Cluster: GA14768-PA; n=1; Drosophila
pseudoobscura|Rep: GA14768-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 729
Score = 37.5 bits (83), Expect = 0.23
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Frame = +2
Query: 23 VVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAHVIRG 202
V +AH C +T + + R P T ++ ++FS R ++
Sbjct: 483 VSQAHRLNCSYTEELTRELMRRPVTVPQNGIATTVAESLEFQKIWLWQQFSARVTPGVQR 542
Query: 203 VIDFAGLIPGFQLLTQDEIHAAQKWSVRCIVRATHLYV*RSS**YHLSQWATDEERLHPE 382
+++FA +PGF TQD+ K V TH+ + T ++ +
Sbjct: 543 IVEFAKRVPGFCDFTQDDQLILIKLGF-FEVWLTHVARLIN------DTTLTLDDGAYLT 595
Query: 383 RCQCKFLVDSTF-----KFAERMNSMNLTDAEIGLF 475
R Q + L D+ F FA +N+ L+D EIGLF
Sbjct: 596 RQQLEILYDTDFVNALLNFANTLNAYGLSDTEIGLF 631
>UniRef50_P45447 Cluster: Ecdysone-induced protein 78C; n=5;
Diptera|Rep: Ecdysone-induced protein 78C - Drosophila
melanogaster (Fruit fly)
Length = 866
Score = 37.1 bits (82), Expect = 0.30
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Frame = +2
Query: 23 VVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAHVIRG 202
V +AH C +T + + R P + ++ ++FS R ++
Sbjct: 620 VSQAHRLNCSYTEELTRELMRRPVTVPQNGIASTVAESLEFQKIWLWQQFSARVTPGVQR 679
Query: 203 VIDFAGLIPGFQLLTQDEIHAAQKWSVRCIVRATHLYV*RSS**YHLSQWATDEERLHPE 382
+++FA +PGF TQD+ K V TH+ + T ++ +
Sbjct: 680 IVEFAKRVPGFCDFTQDDQLILIKLGF-FEVWLTHVARLIN------EATLTLDDGAYLT 732
Query: 383 RCQCKFLVDSTF-----KFAERMNSMNLTDAEIGLF 475
R Q + L DS F FA +N+ L+D EIGLF
Sbjct: 733 RQQLEILYDSDFVNALLNFANTLNAYGLSDTEIGLF 768
>UniRef50_UPI0000F2CB6C Cluster: PREDICTED: similar to
beta-1,4-N-acetyl-galactosaminyl transferase 1,; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to
beta-1,4-N-acetyl-galactosaminyl transferase 1, -
Monodelphis domestica
Length = 557
Score = 36.3 bits (80), Expect = 0.53
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFA 187
R+ V+R+H +TC++T + + + A A+ ++Q L C L P ++ S + +
Sbjct: 310 RVAQNVIRSHRETCQYTTEELKRL-AWAQ----HTQEEL-CNLQAKPCEVLWQQCSLQIS 363
Query: 188 HVIRGVIDFAGLIPGFQLLTQDE 256
H I+ V++FA I GF L Q++
Sbjct: 364 HAIQFVVEFAKRICGFMDLDQND 386
>UniRef50_Q980S9 Cluster: S-adenosylmethionine synthetase; n=22;
Archaea|Rep: S-adenosylmethionine synthetase -
Sulfolobus solfataricus
Length = 404
Score = 33.9 bits (74), Expect = 2.8
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +1
Query: 412 YFQVCGTYEFHEFDGRGNRAFLAIVLITPDRPAAKHRASGKNALATKACLQTVIA 576
Y V GT H DG R + LITP RP + +GKN + L V+A
Sbjct: 270 YLTVTGTSAEHGDDGMTGRGNRGVGLITPMRPMSLEATAGKNPVNHVGKLYNVLA 324
>UniRef50_P31396 Cluster: Probable nuclear hormone receptor HR3;
n=21; Protostomia|Rep: Probable nuclear hormone receptor
HR3 - Drosophila melanogaster (Fruit fly)
Length = 487
Score = 33.9 bits (74), Expect = 2.8
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 173 SQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVR-CIVRATHLYV*RSS**YHLS 346
+++ +I+ +I+FA LIPGF L+Q D+I + S IVR + L + S
Sbjct: 288 AEKLTQMIQNIIEFAKLIPGFMRLSQDDQILLLKTGSFELAIVRMSRL-LDLSQNAVLYG 346
Query: 347 QWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+E + + LV F+ A+ + + LT+ E+ L+
Sbjct: 347 DVMLPQEAFYTSDSEEMRLVSRIFQTAKSIAELKLTETELALY 389
>UniRef50_UPI0000E46516 Cluster: PREDICTED: similar to JAK2 protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to JAK2 protein - Strongylocentrotus purpuratus
Length = 477
Score = 33.5 bits (73), Expect = 3.7
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRF-- 184
L +R HLD +FT A +R + + P + + CP AP+ +K FSQ
Sbjct: 193 LSSRTNWRHLDDGDFTEVWAADLRKKVGNRPRKMRVAIKCPKMDAPQSVQQK-FSQSVDL 251
Query: 185 --AHVIRGVIDFAGLIPGFQLLTQ 250
+ V + +I F G+ G+ L+ +
Sbjct: 252 MSSWVHKHIIRFEGIGAGYMLVME 275
>UniRef50_Q854A9 Cluster: Gp157; n=1; Mycobacterium phage Omega|Rep:
Gp157 - Mycobacterium phage Omega
Length = 107
Score = 33.1 bits (72), Expect = 4.9
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 410 NQRETCIGTALDGVSLHQLPIETDDTIKRSVK 315
N + CI ALD V+LH L ++T++T+K K
Sbjct: 25 NDQGVCILGALDRVALHNLHLDTEETVKARAK 56
>UniRef50_Q7S8L4 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 227
Score = 33.1 bits (72), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 44 TCEFTRDRVASMRARARDCPTYSQPTLACPLNPAP 148
TC +RDR + + A+ +Y QP+ P NPAP
Sbjct: 76 TCRTSRDRPPTRASTAKTSSSYIQPSQPSPQNPAP 110
>UniRef50_Q46MW6 Cluster: Methionine adenosyltransferase; n=5;
Burkholderiaceae|Rep: Methionine adenosyltransferase -
Ralstonia eutropha (strain JMP134) (Alcaligenes
eutrophus)
Length = 394
Score = 32.7 bits (71), Expect = 6.5
Identities = 21/55 (38%), Positives = 25/55 (45%)
Frame = +1
Query: 412 YFQVCGTYEFHEFDGRGNRAFLAIVLITPDRPAAKHRASGKNALATKACLQTVIA 576
Y V G H DG+ R LITP RP + A+GKN A L V+A
Sbjct: 261 YLTVTGLSAEHGDDGQVGRGNRVNGLITPYRPMSLEAAAGKNPAAHVGKLYNVLA 315
>UniRef50_Q02CR3 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 557
Score = 32.7 bits (71), Expect = 6.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 17 ARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAP 148
A VR+HL+ C R +V ++ DC Y + L L P P
Sbjct: 27 ANQVRSHLEACWQCRSQVEELQVAVGDCMRYRKSVLGACLPPPP 70
>UniRef50_Q9FGW9 Cluster: Similarity to kinase; n=1; Arabidopsis
thaliana|Rep: Similarity to kinase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 477
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 504 PIRSDEDYSQKSPISASVKFMEFIRSANLKVESTRNLHW-HRSGWSLSSSV 355
P+RSD+ ++K P +V + S + E+ N W H+SGW + V
Sbjct: 135 PVRSDKQRNKKGPSRLNVPTSYTVASVMKECETLLNRLWSHKSGWPFRTPV 185
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,967,385
Number of Sequences: 1657284
Number of extensions: 10894003
Number of successful extensions: 33216
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33181
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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