Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20019
(587 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone re... 57 4e-08
D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein. 55 2e-07
CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein. 55 2e-07
BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfam... 55 2e-07
AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor... 51 3e-06
X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein pro... 50 5e-06
M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor... 50 5e-06
BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfam... 50 5e-06
BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfam... 50 5e-06
U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor L... 44 5e-04
BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfam... 44 5e-04
BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein. 44 5e-04
L14611-1|AAA02963.1| 468|Homo sapiens transcription factor prot... 40 0.009
U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein. 39 0.011
U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein. 39 0.011
U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein. 39 0.011
BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan rece... 39 0.011
BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan rece... 39 0.011
BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan rece... 39 0.011
BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan rece... 39 0.011
BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan rece... 39 0.011
U14534-1|AAA58594.1| 455|Homo sapiens orphan receptor protein. 38 0.026
U07132-1|AAA61783.1| 461|Homo sapiens Ner-I protein. 38 0.026
CR456706-1|CAG32987.1| 461|Homo sapiens NR1H2 protein. 38 0.026
BC074500-1|AAH74500.1| 461|Homo sapiens nuclear receptor subfam... 38 0.026
BC047750-1|AAH47750.1| 461|Homo sapiens nuclear receptor subfam... 38 0.026
BC033500-1|AAH33500.1| 461|Homo sapiens nuclear receptor subfam... 38 0.026
BC007790-1|AAH07790.1| 461|Homo sapiens nuclear receptor subfam... 38 0.026
Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor R... 33 0.57
BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan rece... 33 0.57
BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan rece... 33 0.57
BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan rece... 33 0.57
AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan rece... 33 0.57
AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan rece... 33 0.57
M24900-1|AAA52332.1| 136|Homo sapiens triiodothyronine receptor... 33 0.75
Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA ... 31 2.3
X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor ... 31 2.3
M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor... 31 2.3
M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1 ... 31 2.3
J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor ... 31 2.3
CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein. 31 2.3
BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein. 31 2.3
BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein. 31 2.3
BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone recepto... 31 2.3
BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone recepto... 31 2.3
AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone recepto... 31 2.3
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 30 5.3
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 30 5.3
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 30 7.0
AK001542-1|BAA91748.1| 659|Homo sapiens protein ( Homo sapiens ... 30 7.0
Z83856-4|CAI18778.1| 1594|Homo sapiens DEP domain containing 5 p... 29 9.2
Z83856-3|CAI18779.1| 1572|Homo sapiens DEP domain containing 5 p... 29 9.2
Z83856-2|CAI18777.1| 1552|Homo sapiens DEP domain containing 5 p... 29 9.2
Z82190-4|CAI19699.1| 1594|Homo sapiens DEP domain containing 5 p... 29 9.2
Z82190-3|CAI19698.1| 1572|Homo sapiens DEP domain containing 5 p... 29 9.2
Z82190-2|CAI19697.1| 1552|Homo sapiens DEP domain containing 5 p... 29 9.2
BC146766-1|AAI46767.1| 1572|Homo sapiens DEP domain containing 5... 29 9.2
BC057797-1|AAH57797.1| 559|Homo sapiens DEP domain containing 5... 29 9.2
AL022331-6|CAI17976.1| 1594|Homo sapiens DEP domain containing 5... 29 9.2
AL022331-5|CAI17975.1| 1572|Homo sapiens DEP domain containing 5... 29 9.2
AL022331-4|CAI17974.1| 1552|Homo sapiens DEP domain containing 5... 29 9.2
AL022331-3|CAI17973.1| 559|Homo sapiens DEP domain containing 5... 29 9.2
AJ704764-1|CAG28924.1| 1572|Homo sapiens DEP domain containing 5... 29 9.2
AJ698951-1|CAG27890.1| 1503|Homo sapiens DEPDC5 protein variant ... 29 9.2
AJ698950-1|CAG27889.1| 1594|Homo sapiens DEPDC5 protein variant ... 29 9.2
AB014545-1|BAA31620.2| 1578|Homo sapiens KIAA0645 protein protein. 29 9.2
>L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone
receptor BD73 protein.
Length = 579
Score = 57.2 bits (132), Expect = 4e-08
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Frame = +2
Query: 98 CPTYSQPTLACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-D 253
C T + L CP++ +P + K EFS F ++ V++FA IPGF+ L+Q D
Sbjct: 373 CNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHD 432
Query: 254 EIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAE 430
+++ + + + VR L+ + LS + LH L++S F+F+E
Sbjct: 433 QVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLH--SMGAGDLLNSMFEFSE 490
Query: 431 RMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
++N++ L+D E+ LF R G +N+ VE + L RA +
Sbjct: 491 KLNALQLSDEEMSLFTAVVLVSADRSGNRKNVNSVEALQETLIRALR 537
Score = 32.7 bits (71), Expect = 0.99
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQS 383
LLK+G F+ L VR +FDA ++ L+G+ D + S
Sbjct: 436 LLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS 475
>D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein.
Length = 579
Score = 54.8 bits (126), Expect = 2e-07
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Frame = +2
Query: 98 CPTYSQPTLACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-D 253
C T + L CP++ +P + K EFS F ++ V++FA IPGF+ L+Q D
Sbjct: 374 CNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHD 433
Query: 254 EIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAE 430
+++ + + + VR L+ + LS + LH L++S F+F+E
Sbjct: 434 QVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLH--SMGAGDLLNSMFEFSE 491
Query: 431 RMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
++N++ L+D E+ LF R G + N+ VE + L RA +
Sbjct: 492 KLNALQLSDEEMSLFTAVVLVSADRSG-IENVNSVEALQETLIRALR 537
Score = 32.7 bits (71), Expect = 0.99
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQS 383
LLK+G F+ L VR +FDA ++ L+G+ D + S
Sbjct: 437 LLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS 476
>CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein.
Length = 579
Score = 54.8 bits (126), Expect = 2e-07
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Frame = +2
Query: 98 CPTYSQPTLACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-D 253
C T + L CP++ +P + K EFS F ++ V++FA IPGF+ L+Q D
Sbjct: 374 CNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHD 433
Query: 254 EIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAE 430
+++ + + + VR L+ + LS + LH L++S F+F+E
Sbjct: 434 QVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLH--SMGAGDLLNSMFEFSE 491
Query: 431 RMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
++N++ L+D E+ LF R G + N+ VE + L RA +
Sbjct: 492 KLNALQLSDEEMSLFTAVVLVSADRSG-IENVNSVEALQETLIRALR 537
Score = 32.7 bits (71), Expect = 0.99
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQS 383
LLK+G F+ L VR +FDA ++ L+G+ D + S
Sbjct: 437 LLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS 476
>BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfamily
1, group D, member 2 protein.
Length = 579
Score = 54.8 bits (126), Expect = 2e-07
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Frame = +2
Query: 98 CPTYSQPTLACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-D 253
C T + L CP++ +P + K EFS F ++ V++FA IPGF+ L+Q D
Sbjct: 374 CNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHD 433
Query: 254 EIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAE 430
+++ + + + VR L+ + LS + LH L++S F+F+E
Sbjct: 434 QVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLH--SMGAGDLLNSMFEFSE 491
Query: 431 RMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
++N++ L+D E+ LF R G + N+ VE + L RA +
Sbjct: 492 KLNALQLSDEEMSLFTAVVLVSADRSG-IENVNSVEALQETLIRALR 537
Score = 32.7 bits (71), Expect = 0.99
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQS 383
LLK+G F+ L VR +FDA ++ L+G+ D + S
Sbjct: 437 LLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS 476
>AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor
NR1D2 variant protein.
Length = 549
Score = 51.2 bits (117), Expect = 3e-06
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Frame = +2
Query: 122 LACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKW 277
+ CP++ +P + K EFS F ++ V++FA IPGF+ L+Q D+++ +
Sbjct: 352 VVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFAKRIPGFRDLSQHDQVNLLKAG 411
Query: 278 SVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLT 454
+ + VR L+ + LS + LH L++S F+F+E++N++ L+
Sbjct: 412 TFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLH--SMGAGDLLNSMFEFSEKLNALQLS 469
Query: 455 DAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
D E+ LF R G + N+ VE + L RA +
Sbjct: 470 DEEMSLFTAVVLVSADRSG-IENVNSVEALQETLIRALR 507
Score = 32.7 bits (71), Expect = 0.99
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LLKSGLFDALFVRLICMFDAPLNSIICLNGQLMKRDSIQS 383
LLK+G F+ L VR +FDA ++ L+G+ D + S
Sbjct: 407 LLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHS 446
>X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein
protein.
Length = 614
Score = 50.4 bits (115), Expect = 5e-06
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Frame = +2
Query: 122 LACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKW 277
LACP+N P +S + +FS F +R V++FA IPGF+ L+Q D++ +
Sbjct: 416 LACPMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAG 475
Query: 278 SVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLT 454
+ + VR L+ + LS+ + L L+ + F F+E++NS+ LT
Sbjct: 476 TFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGA--MGMGDLLSAMFDFSEKLNSLALT 533
Query: 455 DAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
+ E+GLF R G + N VE++ L RA +
Sbjct: 534 EEELGLFTAVVLVSADRSG-MENSASVEQLQETLLRALR 571
>M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor
protein.
Length = 614
Score = 50.4 bits (115), Expect = 5e-06
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Frame = +2
Query: 122 LACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKW 277
LACP+N P +S + +FS F +R V++FA IPGF+ L+Q D++ +
Sbjct: 416 LACPMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAG 475
Query: 278 SVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLT 454
+ + VR L+ + LS+ + L L+ + F F+E++NS+ LT
Sbjct: 476 TFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGA--MGMGDLLSAMFDFSEKLNSLALT 533
Query: 455 DAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
+ E+GLF R G + N VE++ L RA +
Sbjct: 534 EEELGLFTAVVLVSADRSG-MENSASVEQLQETLLRALR 571
>BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 50.4 bits (115), Expect = 5e-06
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Frame = +2
Query: 122 LACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKW 277
LACP+N P +S + +FS F +R V++FA IPGF+ L+Q D++ +
Sbjct: 416 LACPMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAG 475
Query: 278 SVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLT 454
+ + VR L+ + LS+ + L L+ + F F+E++NS+ LT
Sbjct: 476 TFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGA--MGMGDLLSAMFDFSEKLNSLALT 533
Query: 455 DAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
+ E+GLF R G + N VE++ L RA +
Sbjct: 534 EEELGLFTAVVLVSADRSG-MENSASVEQLQETLLRALR 571
>BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 50.4 bits (115), Expect = 5e-06
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Frame = +2
Query: 122 LACPLNPAPELQSEK-------EFSQRFAHVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKW 277
LACP+N P +S + +FS F +R V++FA IPGF+ L+Q D++ +
Sbjct: 416 LACPMNMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAG 475
Query: 278 SVRCI-VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLT 454
+ + VR L+ + LS+ + L L+ + F F+E++NS+ LT
Sbjct: 476 TFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGA--MGMGDLLSAMFDFSEKLNSLALT 533
Query: 455 DAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
+ E+GLF R G + N VE++ L RA +
Sbjct: 534 EEELGLFTAVVLVSADRSG-MENSASVEQLQETLLRALR 571
>U22662-1|AAA85856.1| 447|Homo sapiens nuclear orphan receptor
LXR-alpha protein.
Length = 447
Score = 43.6 bits (98), Expect = 5e-04
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Frame = +2
Query: 104 TYSQPTLACPLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEI 259
++S P AP+ S + QRFAH ++ ++DFA +PGF QL +D+I
Sbjct: 228 SFSDRLRVTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQI 287
Query: 260 HAAQKWSVRCIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERM 436
+ ++ ++ T Y S L ++ + E Q +F ++ F+F+ M
Sbjct: 288 ALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEF-INPIFEFSRAM 346
Query: 437 NSMNLTDAEIGL 472
N + L DAE L
Sbjct: 347 NELQLNDAEFAL 358
>BT019411-1|AAV38218.1| 447|Homo sapiens nuclear receptor subfamily
1, group H, member 3 protein.
Length = 447
Score = 43.6 bits (98), Expect = 5e-04
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Frame = +2
Query: 104 TYSQPTLACPLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEI 259
++S P AP+ S + QRFAH ++ ++DFA +PGF QL +D+I
Sbjct: 228 SFSDRLRVTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQI 287
Query: 260 HAAQKWSVRCIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERM 436
+ ++ ++ T Y S L ++ + E Q +F ++ F+F+ M
Sbjct: 288 ALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEF-INPIFEFSRAM 346
Query: 437 NSMNLTDAEIGL 472
N + L DAE L
Sbjct: 347 NELQLNDAEFAL 358
>BC041172-1|AAH41172.1| 402|Homo sapiens NR1H3 protein protein.
Length = 402
Score = 43.6 bits (98), Expect = 5e-04
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Frame = +2
Query: 104 TYSQPTLACPLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEI 259
++S P AP+ S + QRFAH ++ ++DFA +PGF QL +D+I
Sbjct: 183 SFSDRLRVTPWPMAPDPHSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQI 242
Query: 260 HAAQKWSVRCIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERM 436
+ ++ ++ T Y S L ++ + E Q +F ++ F+F+ M
Sbjct: 243 ALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEF-INPIFEFSRAM 301
Query: 437 NSMNLTDAEIGL 472
N + L DAE L
Sbjct: 302 NELQLNDAEFAL 313
>L14611-1|AAA02963.1| 468|Homo sapiens transcription factor
protein.
Length = 468
Score = 39.5 bits (88), Expect = 0.009
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 221 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 274
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 275 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRVCRAFDSQNNTVYFDGKYASPD 334
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 335 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 368
>U04899-1|AAA62660.1| 548|Homo sapiens RORalpha3 protein.
Length = 548
Score = 39.1 bits (87), Expect = 0.011
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 301 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 354
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 355 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 414
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 415 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 448
>U04898-1|AAA62659.1| 556|Homo sapiens RORalpha2 protein.
Length = 556
Score = 39.1 bits (87), Expect = 0.011
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 309 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 362
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 363 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 422
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 423 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 456
>U04897-1|AAA62658.1| 523|Homo sapiens RORalpha1 protein.
Length = 523
Score = 39.1 bits (87), Expect = 0.011
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 276 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 329
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 330 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 389
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 390 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 423
>BC100990-1|AAI00991.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 39.1 bits (87), Expect = 0.011
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 221 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 274
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 275 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 334
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 335 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 368
>BC100989-1|AAI00990.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 39.1 bits (87), Expect = 0.011
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 221 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 274
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 275 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 334
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 335 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 368
>BC100988-1|AAI00989.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 39.1 bits (87), Expect = 0.011
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 221 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 274
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 275 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 334
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 335 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 368
>BC100987-1|AAI00988.1| 468|Homo sapiens RAR-related orphan
receptor A protein.
Length = 468
Score = 39.1 bits (87), Expect = 0.011
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 221 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 274
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 275 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 334
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 335 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 368
>BC008831-1|AAH08831.1| 523|Homo sapiens RAR-related orphan
receptor A protein.
Length = 523
Score = 39.1 bits (87), Expect = 0.011
Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Frame = +2
Query: 11 LLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFAH 190
L + ++HL+TC++ R+ + + + T+ Q + N E+ + + +
Sbjct: 276 LAQNISKSHLETCQYLREELQQITWQ-----TFLQEEIENYQNKQREVMWQL-CAIKITE 329
Query: 191 VIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATDE 364
I+ V++FA I GF L Q D+I + S+ + +R + +++ Y ++A+ +
Sbjct: 330 AIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPD 389
Query: 365 ERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ C+ + F+F + + SM+LT+ EI LF
Sbjct: 390 VF---KSLGCEDFISFVFEFGKSLCSMHLTEDEIALF 423
>U14534-1|AAA58594.1| 455|Homo sapiens orphan receptor protein.
Length = 455
Score = 37.9 bits (84), Expect = 0.026
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVR 286
PL P+ + ++ QRFAH ++ ++DFA +PGF QL +D+I + ++
Sbjct: 247 PLGADPQSRDARQ--QRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIE 304
Query: 287 CIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
++ T Y + L + ++ H Q +F ++ F+F+ M + L DAE
Sbjct: 305 IMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIFEFSRAMRRLGLDDAE 363
Query: 464 IGL 472
L
Sbjct: 364 YAL 366
>U07132-1|AAA61783.1| 461|Homo sapiens Ner-I protein.
Length = 461
Score = 37.9 bits (84), Expect = 0.026
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVR 286
PL P+ + ++ QRFAH ++ ++DFA +PGF QL +D+I + ++
Sbjct: 253 PLGADPQSRDARQ--QRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIE 310
Query: 287 CIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
++ T Y + L + ++ H Q +F ++ F+F+ M + L DAE
Sbjct: 311 IMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIFEFSRAMRRLGLDDAE 369
Query: 464 IGL 472
L
Sbjct: 370 YAL 372
>CR456706-1|CAG32987.1| 461|Homo sapiens NR1H2 protein.
Length = 461
Score = 37.9 bits (84), Expect = 0.026
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVR 286
PL P+ + ++ QRFAH ++ ++DFA +PGF QL +D+I + ++
Sbjct: 253 PLGADPQSRDARQ--QRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIE 310
Query: 287 CIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
++ T Y + L + ++ H Q +F ++ F+F+ M + L DAE
Sbjct: 311 IMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIFEFSRAMRRLGLDDAE 369
Query: 464 IGL 472
L
Sbjct: 370 YAL 372
>BC074500-1|AAH74500.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 37.9 bits (84), Expect = 0.026
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVR 286
PL P+ + ++ QRFAH ++ ++DFA +PGF QL +D+I + ++
Sbjct: 253 PLGADPQSRDARQ--QRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIE 310
Query: 287 CIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
++ T Y + L + ++ H Q +F ++ F+F+ M + L DAE
Sbjct: 311 IMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIFEFSRAMRRLGLDDAE 369
Query: 464 IGL 472
L
Sbjct: 370 YAL 372
>BC047750-1|AAH47750.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 37.9 bits (84), Expect = 0.026
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVR 286
PL P+ + ++ QRFAH ++ ++DFA +PGF QL +D+I + ++
Sbjct: 253 PLGADPQSRDARQ--QRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIE 310
Query: 287 CIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
++ T Y + L + ++ H Q +F ++ F+F+ M + L DAE
Sbjct: 311 IMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIFEFSRAMRRLGLDDAE 369
Query: 464 IGL 472
L
Sbjct: 370 YAL 372
>BC033500-1|AAH33500.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 37.9 bits (84), Expect = 0.026
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVR 286
PL P+ + ++ QRFAH ++ ++DFA +PGF QL +D+I + ++
Sbjct: 253 PLGADPQSRDARQ--QRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIE 310
Query: 287 CIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
++ T Y + L + ++ H Q +F ++ F+F+ M + L DAE
Sbjct: 311 IMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIFEFSRAMRRLGLDDAE 369
Query: 464 IGL 472
L
Sbjct: 370 YAL 372
>BC007790-1|AAH07790.1| 461|Homo sapiens nuclear receptor subfamily
1, group H, member 2 protein.
Length = 461
Score = 37.9 bits (84), Expect = 0.026
Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Frame = +2
Query: 131 PLNPAPELQSEKEFSQRFAHV-------IRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVR 286
PL P+ + ++ QRFAH ++ ++DFA +PGF QL +D+I + ++
Sbjct: 253 PLGADPQSRDARQ--QRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIE 310
Query: 287 CIVRAT-HLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAE 463
++ T Y + L + ++ H Q +F ++ F+F+ M + L DAE
Sbjct: 311 IMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEF-INPIFEFSRAMRRLGLDDAE 369
Query: 464 IGL 472
L
Sbjct: 370 YAL 372
>Y08639-1|CAA69929.1| 459|Homo sapiens nuclear orphan receptor
ROR-beta protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.57
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFA 187
R+ ++++HL+TC++T + + + A TY + + + + E + + + +
Sbjct: 214 RIAQNIIKSHLETCQYTMEELHQL---AWQTHTYEE--IKAYQSKSREALWQ-QCAIQIT 267
Query: 188 HVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATD 361
H I+ V++FA I GF L Q D+I + + + VR + ++ ++
Sbjct: 268 HAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGM 327
Query: 362 EERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ + LV+ F FA+ + S+ LT+ EI LF
Sbjct: 328 QMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALF 362
>BC093774-1|AAH93774.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.57
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFA 187
R+ ++++HL+TC++T + + + A TY + + + + E + + + +
Sbjct: 214 RIAQNIIKSHLETCQYTMEELHQL---AWQTHTYEE--IKAYQSKSREALWQ-QCAIQIT 267
Query: 188 HVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATD 361
H I+ V++FA I GF L Q D+I + + + VR + ++ ++
Sbjct: 268 HAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGM 327
Query: 362 EERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ + LV+ F FA+ + S+ LT+ EI LF
Sbjct: 328 QMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALF 362
>BC093772-1|AAH93772.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.57
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFA 187
R+ ++++HL+TC++T + + + A TY + + + + E + + + +
Sbjct: 214 RIAQNIIKSHLETCQYTMEELHQL---AWQTHTYEE--IKAYQSKSREALWQ-QCAIQIT 267
Query: 188 HVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATD 361
H I+ V++FA I GF L Q D+I + + + VR + ++ ++
Sbjct: 268 HAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGM 327
Query: 362 EERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ + LV+ F FA+ + S+ LT+ EI LF
Sbjct: 328 QMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALF 362
>BC051830-1|AAH51830.1| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.57
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFA 187
R+ ++++HL+TC++T + + + A TY + + + + E + + + +
Sbjct: 214 RIAQNIIKSHLETCQYTMEELHQL---AWQTHTYEE--IKAYQSKSREALWQ-QCAIQIT 267
Query: 188 HVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATD 361
H I+ V++FA I GF L Q D+I + + + VR + ++ ++
Sbjct: 268 HAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGM 327
Query: 362 EERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ + LV+ F FA+ + S+ LT+ EI LF
Sbjct: 328 QMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALF 362
>AL355674-1|CAD13280.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.57
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFA 187
R+ ++++HL+TC++T + + + A TY + + + + E + + + +
Sbjct: 214 RIAQNIIKSHLETCQYTMEELHQL---AWQTHTYEE--IKAYQSKSREALWQ-QCAIQIT 267
Query: 188 HVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATD 361
H I+ V++FA I GF L Q D+I + + + VR + ++ ++
Sbjct: 268 HAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGM 327
Query: 362 EERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ + LV+ F FA+ + S+ LT+ EI LF
Sbjct: 328 QMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALF 362
>AL137018-1|CAD13276.2| 459|Homo sapiens RAR-related orphan
receptor B protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.57
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +2
Query: 8 RLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRFA 187
R+ ++++HL+TC++T + + + A TY + + + + E + + + +
Sbjct: 214 RIAQNIIKSHLETCQYTMEELHQL---AWQTHTYEE--IKAYQSKSREALWQ-QCAIQIT 267
Query: 188 HVIRGVIDFAGLIPGFQLLTQ-DEIHAAQKWSVRCI-VRATHLYV*RSS**YHLSQWATD 361
H I+ V++FA I GF L Q D+I + + + VR + ++ ++
Sbjct: 268 HAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGM 327
Query: 362 EERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIGLF 475
+ + LV+ F FA+ + S+ LT+ EI LF
Sbjct: 328 QMF---KALGSDDLVNEAFDFAKNLCSLQLTEEEIALF 362
>M24900-1|AAA52332.1| 136|Homo sapiens triiodothyronine receptor
protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.75
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +2
Query: 401 LVDSTFKFAERMNSMNLTDAEIGLFW--XXXXXXRIGLLRNIELVERMHSRLRRACK 565
L+ + F F+E++NS+ LT+ E+GLF R G + N VE++ L RA +
Sbjct: 38 LLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSG-MENSASVEQLQETLLRALR 93
>Y00479-1|CAA68539.1| 490|Homo sapiens protein ( H.sapiens mRNA for
thyroid hormone receptor. ).
Length = 490
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>X55005-1|CAA38749.1| 410|Homo sapiens thyriod hormone receptor
alpha 1, THRA1 protein.
Length = 410
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>M24899-1|AAA35783.1| 490|Homo sapiens triiodothyronine receptor
protein.
Length = 490
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>M24748-2|AAA66021.1| 410|Homo sapiens thyroid receptor alpha-1
protein.
Length = 410
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>J03239-1|AAA61176.1| 490|Homo sapiens thyroid hormone receptor
protein.
Length = 490
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>CR541915-1|CAG46713.1| 410|Homo sapiens THRA protein.
Length = 410
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>BC035137-1|AAH35137.1| 451|Homo sapiens THRA protein protein.
Length = 451
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>BC008851-1|AAH08851.1| 410|Homo sapiens THRA protein protein.
Length = 410
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>BC002728-1|AAH02728.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>BC000261-1|AAH00261.1| 490|Homo sapiens thyroid hormone receptor,
alpha (erythroblastic leukemia viral (v-erb-a) oncoge
protein.
Length = 490
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 200 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 259
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 260 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 317
Query: 470 L 472
L
Sbjct: 318 L 318
>AB209346-1|BAD92583.1| 397|Homo sapiens thyroid hormone receptor,
alpha isoform 1 variant protein.
Length = 397
Score = 31.5 bits (68), Expect = 2.3
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Frame = +2
Query: 116 PTLACPLNPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGF-QLLTQDEIHAAQKWSVRCI 292
P ++ P +L++ EF++ I V+DFA +P F +L +D+I + + +
Sbjct: 187 PIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIM 246
Query: 293 -VRATHLYV*RSS**YHLSQWATDEERLHPERCQCKFLVDSTFKFAERMNSMNLTDAEIG 469
+RA Y S + A E+L + + D+ F+ + +++ NL D E+
Sbjct: 247 SLRAAVRYDPESDTLTLSGEMAVKREQL--KNGGLGVVSDAIFELGKSLSAFNLDDTEVA 304
Query: 470 L 472
L
Sbjct: 305 L 305
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 30.3 bits (65), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 137 NPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGFQLLTQDEIHAAQK 274
N + L S ++ ++ VIR + D GLIP + L +I AA K
Sbjct: 1773 NASSYLTSASSLARAYSIVIRQISDLMGLIPKYNHLVYSQIPAAVK 1818
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 30.3 bits (65), Expect = 5.3
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 137 NPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGFQLLTQDEIHAAQK 274
N + L S ++ ++ VIR + D GLIP + L +I AA K
Sbjct: 1795 NASSYLTSASSLARAYSIVIRQISDLMGLIPKYNHLVYSQIPAAVK 1840
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 29.9 bits (64), Expect = 7.0
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 137 NPAPELQSEKEFSQRFAHVIRGVIDFAGLIPGFQLLTQDEIHAAQK 274
N + L S ++ ++ VIR + D GLIP + L +I AA K
Sbjct: 1772 NASSYLTSASSLARAYSIVIRQISDLMGLIPKYNHLVYPQIPAAVK 1817
>AK001542-1|BAA91748.1| 659|Homo sapiens protein ( Homo sapiens
cDNA FLJ10680 fis, clone NT2RP2006573, weakly similar to
2',3'-CYCLIC NUCLEOTIDE 3'-PHOSPHODIESTERASE (EC
3.1.4.37). ).
Length = 659
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 585 PVLCNDSLQARLSRECILSTSSMFRSRPIRSDEDY---SQKSPISASVKFMEFIRSANLK 415
P++ + S+ ++ R + + S RS R DED +++ +S S+K +EF NL
Sbjct: 580 PIIMSSSVPEKIERIELCAYSCEDRSTSPRDDEDIISEKEENILSLSLKHLEFTEEKNLD 639
Query: 414 V 412
V
Sbjct: 640 V 640
>Z83856-4|CAI18778.1| 1594|Homo sapiens DEP domain containing 5
protein.
Length = 1594
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>Z83856-3|CAI18779.1| 1572|Homo sapiens DEP domain containing 5
protein.
Length = 1572
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>Z83856-2|CAI18777.1| 1552|Homo sapiens DEP domain containing 5
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>Z82190-4|CAI19699.1| 1594|Homo sapiens DEP domain containing 5
protein.
Length = 1594
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>Z82190-3|CAI19698.1| 1572|Homo sapiens DEP domain containing 5
protein.
Length = 1572
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>Z82190-2|CAI19697.1| 1552|Homo sapiens DEP domain containing 5
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>BC146766-1|AAI46767.1| 1572|Homo sapiens DEP domain containing 5
protein.
Length = 1572
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>BC057797-1|AAH57797.1| 559|Homo sapiens DEP domain containing 5
protein.
Length = 559
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>AL022331-6|CAI17976.1| 1594|Homo sapiens DEP domain containing 5
protein.
Length = 1594
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>AL022331-5|CAI17975.1| 1572|Homo sapiens DEP domain containing 5
protein.
Length = 1572
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>AL022331-4|CAI17974.1| 1552|Homo sapiens DEP domain containing 5
protein.
Length = 1552
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>AL022331-3|CAI17973.1| 559|Homo sapiens DEP domain containing 5
protein.
Length = 559
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>AJ704764-1|CAG28924.1| 1572|Homo sapiens DEP domain containing 5
variant 1 (DEPDC5_v1) protein.
Length = 1572
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>AJ698951-1|CAG27890.1| 1503|Homo sapiens DEPDC5 protein variant 3
protein.
Length = 1503
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>AJ698950-1|CAG27889.1| 1594|Homo sapiens DEPDC5 protein variant 1
protein.
Length = 1594
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 478 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 519
>AB014545-1|BAA31620.2| 1578|Homo sapiens KIAA0645 protein protein.
Length = 1578
Score = 29.5 bits (63), Expect = 9.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 38 LDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSE 163
L TC R+R + R A C S P+L P E++S+
Sbjct: 484 LTTCRSVRERESHSRKSASSCDVSSSPSLPSRTLPTEEVRSQ 525
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,179,233
Number of Sequences: 237096
Number of extensions: 1706161
Number of successful extensions: 12148
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 11797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12112
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -