BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20017
(763 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 26 1.1
AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein. 25 3.4
AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein. 25 3.4
AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein. 25 3.4
AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein. 25 3.4
AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein. 25 3.4
AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein. 25 3.4
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 26.2 bits (55), Expect = 1.1
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -3
Query: 551 SLISYTYIFRSLAGPAGTHNKM*RARSFEAARMRHALWNRALITY*PFEREPSIVRLSMR 372
+L+S T IFRS P ++ + + +R NR+ + F+ S RL R
Sbjct: 319 ALLSCTPIFRSPPNPPWSNRTLRNLKKDRMKYLRRYRLNRSAFNFRLFKYAASAHRLYNR 378
Query: 371 IKYGASEYRL 342
++ A RL
Sbjct: 379 ARFEAYSSRL 388
>AY341224-1|AAR13788.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 601 SEPVLEAFSGSGRINNKVSLVTPTFLDH 518
+EP++ GSG I+NK+SL D+
Sbjct: 65 AEPLIVGRRGSGTISNKLSLQHVQLFDY 92
>AY341223-1|AAR13787.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 601 SEPVLEAFSGSGRINNKVSLVTPTFLDH 518
+EP++ GSG I+NK+SL D+
Sbjct: 65 AEPLIVGRRGSGTISNKLSLQHVQLFDY 92
>AY341222-1|AAR13786.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 601 SEPVLEAFSGSGRINNKVSLVTPTFLDH 518
+EP++ GSG I+NK+SL D+
Sbjct: 65 AEPLIVGRRGSGTISNKLSLQHVQLFDY 92
>AY341221-1|AAR13785.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 601 SEPVLEAFSGSGRINNKVSLVTPTFLDH 518
+EP++ GSG I+NK+SL D+
Sbjct: 65 AEPLIVGRRGSGTISNKLSLQHVQLFDY 92
>AY341220-1|AAR13784.1| 287|Anopheles gambiae TOLL9 protein.
Length = 287
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 601 SEPVLEAFSGSGRINNKVSLVTPTFLDH 518
+EP++ GSG I+NK+SL D+
Sbjct: 65 AEPLIVGRRGSGTISNKLSLQHVQLFDY 92
>AF444782-1|AAL37903.1| 576|Anopheles gambiae Toll9 protein.
Length = 576
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 601 SEPVLEAFSGSGRINNKVSLVTPTFLDH 518
+EP++ GSG I+NK+SL D+
Sbjct: 292 AEPLIVGRRGSGTISNKLSLQHVQLFDY 319
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,989
Number of Sequences: 2352
Number of extensions: 13765
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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