Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20017
         (763 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129450-1|AAM76192.1|  979|Drosophila melanogaster LD36241p pro...    30   3.0  
AE014296-1277|AAF50546.2| 1332|Drosophila melanogaster CG7546-PA...    30   3.0  

>AY129450-1|AAM76192.1|  979|Drosophila melanogaster LD36241p
           protein.
          Length = 979

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 692 PGGNEGKLKTRTKHTDRKLTTAVVSFVLNSLR 597
           P G  G+L+  T    R L T + +F++N++R
Sbjct: 543 PSGRRGRLQAATSRLSRHLPTQLANFLINNMR 574


>AE014296-1277|AAF50546.2| 1332|Drosophila melanogaster CG7546-PA,
           isoform A protein.
          Length = 1332

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 692 PGGNEGKLKTRTKHTDRKLTTAVVSFVLNSLR 597
           P G  G+L+  T    R L T + +F++N++R
Sbjct: 895 PSGRRGRLQAATSRLSRHLPTQLANFLINNMR 926


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,683,295
Number of Sequences: 53049
Number of extensions: 599542
Number of successful extensions: 889
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)